Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060171.seq
         (724 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013069-1|AAH13069.1|  112|Homo sapiens CCBL1 protein protein.        30   9.6  

>BC013069-1|AAH13069.1|  112|Homo sapiens CCBL1 protein protein.
          Length = 112

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = +3

Query: 39  AALELV---DPPGCRNSARGYLGYFHTTFPCFPDLSSTI 146
           A LEL+   DPP   + + G +G  H T+PC  D  + +
Sbjct: 23  AGLELLTSGDPPVSASQSAGIIGVSHRTWPCSSDFDAAL 61


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,480,603
Number of Sequences: 237096
Number of extensions: 2261239
Number of successful extensions: 4196
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4196
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)