Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060171.seq
(724 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 77 2e-14
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 73 5e-13
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 73 5e-13
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 72 7e-13
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 67 3e-11
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 66 6e-11
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 66 6e-11
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 64 1e-10
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 58 1e-08
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 54 2e-07
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 54 2e-07
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 54 3e-07
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 53 3e-07
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 52 6e-07
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 52 8e-07
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 51 2e-06
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 51 2e-06
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 51 2e-06
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 51 2e-06
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 51 2e-06
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 49 7e-06
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 48 1e-05
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 48 1e-05
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 48 1e-05
X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like p... 48 1e-05
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 40 0.005
AY095064-1|AAM11392.1| 552|Drosophila melanogaster RE06823p pro... 29 6.4
AY052081-1|AAK93505.1| 552|Drosophila melanogaster SD03340p pro... 29 6.4
AE014298-1051|AAF46266.2| 552|Drosophila melanogaster CG15478-P... 29 6.4
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 77.4 bits (182), Expect = 2e-14
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = -1
Query: 508 QAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDVQY 329
QA+KT +IPILKP+ SSYRPISL+ C+ KI + ++ RL W V N++I D Q+
Sbjct: 485 QAYKTSLIIPILKPNTDKTKTSSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQF 544
Query: 328 GFRRGRSCADSFI 290
GF++G+S +D +
Sbjct: 545 GFKKGKSTSDCLL 557
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 72.5 bits (170), Expect = 5e-13
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
+ + WK ++PILKP K P+ SYRPISL S L KI E ++K+RL +++ ++ +P V
Sbjct: 513 FPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTV 572
Query: 334 QYGFRRG 314
QYGFR G
Sbjct: 573 QYGFRNG 579
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 72.5 bits (170), Expect = 5e-13
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
+ + WK ++PILKP K P+ SYRPISL S L KI E ++K+RL +++ ++ +P V
Sbjct: 461 FPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTV 520
Query: 334 QYGFRRG 314
QYGFR G
Sbjct: 521 QYGFRNG 527
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 72.1 bits (169), Expect = 7e-13
Identities = 30/77 (38%), Positives = 47/77 (61%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
Y W++ +IPI KP+K P +SYRPISL SCLGK E ++ RL W+++ +++I
Sbjct: 488 YPHTWRSAIIIPISKPNKPPSDINSYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISHN 547
Query: 334 QYGFRRGRSCADSFISL 284
Q F+ S D+ + +
Sbjct: 548 QVAFKSNHSTMDALLRI 564
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 66.9 bits (156), Expect = 3e-11
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
+ Q WK +I I KP K +ASSYRPISL SC+ K+FE L +RL+ + ++IIP
Sbjct: 486 FPQRWKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAH 545
Query: 334 QYGFRRGRSCADSFISLISDL 272
Q+GFR + + +++
Sbjct: 546 QFGFRESHGTIEQVNRITTEI 566
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 65.7 bits (153), Expect = 6e-11
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
+ Q WK ++ I KP K SSYRPISL +CL K+FE ML +R+ ++ N+ +P
Sbjct: 484 FPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTH 543
Query: 334 QYGFRRGRSCADSFISLISDL 272
Q+GFR + + S++
Sbjct: 544 QFGFREKHGTIEQVNRITSEI 564
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 65.7 bits (153), Expect = 6e-11
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
+ Q WK ++ I KP K SSYRPISL +CL K+FE ML +R+ ++ N+ +P
Sbjct: 484 FPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTH 543
Query: 334 QYGFRRGRSCADSFISLISDL 272
Q+GFR + + S++
Sbjct: 544 QFGFREKHGTIEQVNRITSEI 564
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 64.5 bits (150), Expect = 1e-10
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = -1
Query: 520 QLYSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIP 341
Q + + WK ++ I KP K E SYRPISL S L K++E ++ RL+ + I+P
Sbjct: 487 QFFPKQWKMAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANRLNDIMTERRILP 546
Query: 340 DVQYGFRRGRSCAD 299
D Q+GFR+G S +
Sbjct: 547 DHQFGFRQGHSTVE 560
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 58.0 bits (134), Expect = 1e-08
Identities = 28/83 (33%), Positives = 43/83 (51%)
Frame = -1
Query: 520 QLYSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIP 341
Q + WK + I KP K +SYRPISL + K+FE ++ VR+ +EA I P
Sbjct: 486 QYFPYQWKLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVRIVSIMEAQGITP 545
Query: 340 DVQYGFRRGRSCADSFISLISDL 272
+ Q+GFR G + ++ +
Sbjct: 546 EHQFGFRAGHCTVEQLHRVVEQI 568
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 54.0 bits (124), Expect = 2e-07
Identities = 28/65 (43%), Positives = 36/65 (55%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
+ +AWK+ +I I K K P SYRPISL LGKI E ++ RL + IP
Sbjct: 292 FPKAWKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIMERLILNRLLTCKDVTKAIPKF 351
Query: 334 QYGFR 320
Q+GFR
Sbjct: 352 QFGFR 356
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/64 (39%), Positives = 40/64 (62%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
+ Q WK +I I KP+K + SYRPISL +CL K+FE L +R+ +++ ++ +P
Sbjct: 26 FPQKWKKSIIIMIPKPEK-DKTQPSYRPISLLTCLSKLFEKGLLLRISPHLKTHNTLPSY 84
Query: 334 QYGF 323
Q+ F
Sbjct: 85 QFDF 88
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 53.6 bits (123), Expect = 3e-07
Identities = 25/78 (32%), Positives = 44/78 (56%)
Frame = -1
Query: 517 LYSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPD 338
++ + WK ++ +LK + SYRP+ L +GK+FE +L R++ E+ +
Sbjct: 453 VFPKRWKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYARIELITESPTGLQG 512
Query: 337 VQYGFRRGRSCADSFISL 284
QYGFR+G+S D+ S+
Sbjct: 513 QQYGFRKGKSTLDALKSV 530
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 53.2 bits (122), Expect = 3e-07
Identities = 32/66 (48%), Positives = 37/66 (56%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
Y +AWK V ILKP K+ SYRPISL S L KIFE +L RL IP
Sbjct: 533 YPEAWKHAQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLH 592
Query: 334 QYGFRR 317
Q+GFR+
Sbjct: 593 QFGFRK 598
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 52.4 bits (120), Expect = 6e-07
Identities = 31/66 (46%), Positives = 37/66 (56%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
Y +AWK V ILKP K+ SYRPISL S L K+FE +L RL IP
Sbjct: 545 YPEAWKHAQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 604
Query: 334 QYGFRR 317
Q+GFR+
Sbjct: 605 QFGFRK 610
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 52.0 bits (119), Expect = 8e-07
Identities = 27/65 (41%), Positives = 35/65 (53%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
+ +AWK+ +I I K K P SYRP SL LGKI E ++ RL + IP
Sbjct: 490 FPKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGKIMERLILNRLLTCKDVTKAIPKF 549
Query: 334 QYGFR 320
Q+GFR
Sbjct: 550 QFGFR 554
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 50.8 bits (116), Expect = 2e-06
Identities = 31/66 (46%), Positives = 36/66 (54%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
Y AWK V ILKP K+ SYRPISL S L K+FE +L RL IP
Sbjct: 417 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 476
Query: 334 QYGFRR 317
Q+GFR+
Sbjct: 477 QFGFRK 482
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 50.8 bits (116), Expect = 2e-06
Identities = 31/66 (46%), Positives = 36/66 (54%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
Y AWK V ILKP K+ SYRPISL S L K+FE +L RL IP
Sbjct: 533 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 592
Query: 334 QYGFRR 317
Q+GFR+
Sbjct: 593 QFGFRK 598
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 50.8 bits (116), Expect = 2e-06
Identities = 31/66 (46%), Positives = 36/66 (54%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
Y AWK V ILKP K+ SYRPISL S L K+FE +L RL IP
Sbjct: 533 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 592
Query: 334 QYGFRR 317
Q+GFR+
Sbjct: 593 QFGFRK 598
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 50.8 bits (116), Expect = 2e-06
Identities = 31/66 (46%), Positives = 36/66 (54%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
Y AWK V ILKP K+ SYRPISL S L K+FE +L RL IP
Sbjct: 495 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 554
Query: 334 QYGFRR 317
Q+GFR+
Sbjct: 555 QFGFRK 560
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 50.8 bits (116), Expect = 2e-06
Identities = 31/66 (46%), Positives = 36/66 (54%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
Y AWK V ILKP K+ SYRPISL S L K+FE +L RL IP
Sbjct: 533 YPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLH 592
Query: 334 QYGFRR 317
Q+GFR+
Sbjct: 593 QFGFRK 598
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 48.8 bits (111), Expect = 7e-06
Identities = 27/66 (40%), Positives = 35/66 (53%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
+ WK + I KP K+P +SYRPISL S L K+ E +L RL IP
Sbjct: 536 FPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSH 595
Query: 334 QYGFRR 317
Q+GFR+
Sbjct: 596 QFGFRK 601
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 48.4 bits (110), Expect = 1e-05
Identities = 27/66 (40%), Positives = 35/66 (53%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
+ WK + I KP K+P +SYRPISL S L K+ E +L RL IP
Sbjct: 89 FPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSH 148
Query: 334 QYGFRR 317
Q+GFR+
Sbjct: 149 QFGFRK 154
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 48.4 bits (110), Expect = 1e-05
Identities = 27/66 (40%), Positives = 35/66 (53%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
+ WK + I KP K+P +SYRPISL S L K+ E +L RL IP
Sbjct: 536 FPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSH 595
Query: 334 QYGFRR 317
Q+GFR+
Sbjct: 596 QFGFRK 601
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 48.4 bits (110), Expect = 1e-05
Identities = 27/66 (40%), Positives = 35/66 (53%)
Frame = -1
Query: 514 YSQAWKTQCVIPILKPDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPDV 335
+ WK + I KP K+P +SYRPISL S L K+ E +L RL IP
Sbjct: 536 FPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSH 595
Query: 334 QYGFRR 317
Q+GFR+
Sbjct: 596 QFGFRK 601
>X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like
protein protein.
Length = 110
Score = 48.0 bits (109), Expect = 1e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 21 SSTAVAAALELVDPPGCRNSAR 86
SSTAVAAALELVDPPGCRNSAR
Sbjct: 2 SSTAVAAALELVDPPGCRNSAR 23
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 39.5 bits (88), Expect = 0.005
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = -1
Query: 502 WKTQCVIPILK-PDKAPELASSYRPISLSSCLGKIFETMLKVRLDWYVEANHIIPD---V 335
WK V+ +LK PDK SSYR I L GK+ E ++ R+ ++P+
Sbjct: 490 WKCPRVVSLLKGPDKDKCEPSSYRGICLLPVFGKVLEAIMVNRV------REVLPEGCRW 543
Query: 334 QYGFRRGRSCADSFISLISDLDITPPSY 251
Q+GFR+GR D++ + S + + Y
Sbjct: 544 QFGFRQGRCVEDAWRHVKSSVGASAAQY 571
>AY095064-1|AAM11392.1| 552|Drosophila melanogaster RE06823p
protein.
Length = 552
Score = 29.1 bits (62), Expect = 6.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 102 SIQDNLVPNSCSPGDPLVLERPPPRW 25
++QDN P + P LVL PPP W
Sbjct: 265 NLQDNTPPAASLPPQDLVLPPPPPVW 290
>AY052081-1|AAK93505.1| 552|Drosophila melanogaster SD03340p
protein.
Length = 552
Score = 29.1 bits (62), Expect = 6.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 102 SIQDNLVPNSCSPGDPLVLERPPPRW 25
++QDN P + P LVL PPP W
Sbjct: 265 NLQDNTPPAASLPPQDLVLPPPPPVW 290
>AE014298-1051|AAF46266.2| 552|Drosophila melanogaster CG15478-PA
protein.
Length = 552
Score = 29.1 bits (62), Expect = 6.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 102 SIQDNLVPNSCSPGDPLVLERPPPRW 25
++QDN P + P LVL PPP W
Sbjct: 265 NLQDNTPPAASLPPQDLVLPPPPPVW 290
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,009,832
Number of Sequences: 53049
Number of extensions: 654766
Number of successful extensions: 1182
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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