Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060170.seq
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...    28   0.32 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   5.2  
AY045760-4|AAK84945.1|  165|Anopheles gambiae D7-related 4 prote...    24   5.2  
AJ302659-1|CAC35524.1|  165|Anopheles gambiae D7r4 protein protein.    24   5.2  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score = 27.9 bits (59), Expect = 0.32
 Identities = 25/91 (27%), Positives = 43/91 (47%)
 Frame = +3

Query: 24  LKTSFFRNKIAFFVPVRLINWKHSKVRHSLINFGLHTKQTRSRFSQVPVMGAFSPLDPSS 203
           + T   RNKIA FV   +   +HS+VR   I+  L  ++   R + VP + A    D   
Sbjct: 41  IPTKPLRNKIAGFVTHLMKRLRHSQVRG--ISIKLQEEERERRDNYVPDVSALEQ-DIIE 97

Query: 204 FSRPEQAVIKHVTLSLNWILKTKS*TDPPLS 296
                + ++KH+  + N +++  + T P  S
Sbjct: 98  VDPETKEMLKHLDFN-NIVVQLTNPTAPGYS 127


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 14/60 (23%), Positives = 27/60 (45%)
 Frame = +2

Query: 395  LDDPVPNYGSKLTIQLPKRASSGDKLKIKIKYTTSPSALRYNGYSQLKLSGEENILIYSA 574
            LD  +  +G   T+ +  +  S  +++    Y      L Y+G+      GE + L+Y+A
Sbjct: 3156 LDGMISCFGHSSTVTIIPKFESNPRIENADHYKYC-MPLTYDGHPSASCEGEWSSLVYTA 3214


>AY045760-4|AAK84945.1|  165|Anopheles gambiae D7-related 4 protein
           protein.
          Length = 165

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 269 CFQNPVQR*SHMFYYSLFRPRKGRRIQR 186
           C Q P    +H+FY  L +   GR  ++
Sbjct: 102 CVQVPTSERAHVFYKCLLKSTTGRTFKK 129


>AJ302659-1|CAC35524.1|  165|Anopheles gambiae D7r4 protein protein.
          Length = 165

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 269 CFQNPVQR*SHMFYYSLFRPRKGRRIQR 186
           C Q P    +H+FY  L +   GR  ++
Sbjct: 102 CVQVPTSERAHVFYKCLLKSTTGRTFKK 129


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,318
Number of Sequences: 2352
Number of extensions: 11945
Number of successful extensions: 71
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)