BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV060167.seq (534 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 135 7e-31 UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 130 1e-29 UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 130 3e-29 UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 123 3e-27 UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 122 7e-27 UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 116 4e-25 UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 108 9e-23 UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 108 9e-23 UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 107 2e-22 UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 105 5e-22 UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 105 6e-22 UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 101 1e-20 UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 100 2e-20 UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 97 2e-19 UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 87 3e-16 UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 79 5e-14 UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 77 3e-13 UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 61 1e-08 UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 51 2e-05 UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 50 4e-05 UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 47 2e-04 UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 44 0.003 UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 43 0.004 UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 43 0.005 UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.012 UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 38 0.11 UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 36 0.44 UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 36 0.58 UniRef50_Q1IKS3 Cluster: Putative uncharacterized protein precur... 36 0.77 UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 36 0.77 UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 1.3 UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 34 1.8 UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 34 2.3 UniRef50_A3C5V0 Cluster: Putative uncharacterized protein; n=2; ... 34 2.3 UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 2.3 UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 34 2.3 UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 3.1 UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2; ... 33 4.1 UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4 UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;... 32 7.2 UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza sa... 32 7.2 UniRef50_UPI0000DB70FB Cluster: PREDICTED: similar to achintya C... 32 9.5 UniRef50_Q6ZLN8 Cluster: Putative uncharacterized protein OJ1058... 32 9.5 >UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens (Human) Length = 427 Score = 135 bits (326), Expect = 7e-31 Identities = 58/59 (98%), Positives = 58/59 (98%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116 Score = 72.5 bits (170), Expect = 5e-12 Identities = 34/56 (60%), Positives = 43/56 (76%) Frame = +1 Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249 ++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55 >UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia malayi (Filarial nematode worm) Length = 306 Score = 130 bits (315), Expect = 1e-29 Identities = 57/59 (96%), Positives = 58/59 (98%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHRRVN Sbjct: 175 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWHRRVN 233 Score = 51.6 bits (118), Expect = 1e-05 Identities = 24/47 (51%), Positives = 33/47 (70%) Frame = +1 Query: 109 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249 VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY V+ Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVS 172 >UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila melanogaster (Fruit fly) Length = 401 Score = 130 bits (313), Expect = 3e-29 Identities = 56/59 (94%), Positives = 58/59 (98%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWHR+VN Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVN 119 Score = 70.5 bits (165), Expect = 2e-11 Identities = 34/58 (58%), Positives = 43/58 (74%) Frame = +1 Query: 76 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249 MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y V+ Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVS 58 Score = 35.9 bits (79), Expect = 0.58 Identities = 14/26 (53%), Positives = 22/26 (84%) Frame = +1 Query: 451 LGGSVAATGVPALVQARGHILKKISE 528 L ++AA+GVPALVQ++GH++ +SE Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSE 152 >UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; Phaeosphaeria nodorum|Rep: Putative uncharacterized protein - Phaeosphaeria nodorum (Septoria nodorum) Length = 349 Score = 123 bits (296), Expect = 3e-27 Identities = 52/69 (75%), Positives = 59/69 (85%) Frame = +2 Query: 224 TRGSPTA*QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 403 T+ + T AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK Sbjct: 24 TKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKV 83 Query: 404 WRRWHRRVN 430 WR+WH+++N Sbjct: 84 WRKWHQKIN 92 >UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Sclerotiniaceae|Rep: 60S ribosomal protein L4 - Sclerotinia sclerotiorum 1980 Length = 373 Score = 122 bits (293), Expect = 7e-27 Identities = 50/59 (84%), Positives = 55/59 (93%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430 AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH+++N Sbjct: 57 AGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKIN 115 Score = 59.7 bits (138), Expect = 4e-08 Identities = 29/53 (54%), Positives = 34/53 (64%) Frame = +1 Query: 91 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249 +RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY V+ Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVS 54 >UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, putative; n=5; Plasmodium|Rep: 60S ribosomal subunit protein L4/L1, putative - Plasmodium chabaudi Length = 411 Score = 116 bits (278), Expect = 4e-25 Identities = 49/60 (81%), Positives = 54/60 (90%) Frame = +2 Query: 251 GAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430 GAG++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW R++N Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKIN 116 Score = 48.0 bits (109), Expect = 1e-04 Identities = 23/55 (41%), Positives = 33/55 (60%) Frame = +1 Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 246 ++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAV 54 >UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Oligohymenophorea|Rep: Ribosomal protein L4, putative - Paramecium tetraurelia Length = 406 Score = 108 bits (259), Expect = 9e-23 Identities = 51/79 (64%), Positives = 54/79 (68%) Frame = +2 Query: 194 SMMFTFLCPRTRGSPTA*QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR 373 S + T + R + AG Q SAESWGTGRAVARIPRV G GTHRSGQ AFGN CR Sbjct: 39 SFVHTNIAKNRRQAHAVNPQAGMQHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCR 98 Query: 374 GGRMFAPTKPWRRWHRRVN 430 GRM P K WRRWHRRVN Sbjct: 99 KGRMSLPIKVWRRWHRRVN 117 Score = 52.0 bits (119), Expect = 8e-06 Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%) Frame = +1 Query: 97 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 246 PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAV 55 >UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia bovis|Rep: Ribosomal protein RPL4A - Babesia bovis Length = 360 Score = 108 bits (259), Expect = 9e-23 Identities = 42/59 (71%), Positives = 52/59 (88%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430 +G+QTSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWHR+VN Sbjct: 57 SGYQTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVN 115 Score = 47.6 bits (108), Expect = 2e-04 Identities = 26/53 (49%), Positives = 33/53 (62%) Frame = +1 Query: 94 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTR 252 RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y V++ Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSK 55 >UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4; Cryptosporidium|Rep: 60S ribosomal protein-like, putative - Cryptosporidium parvum Iowa II Length = 394 Score = 107 bits (256), Expect = 2e-22 Identities = 46/59 (77%), Positives = 51/59 (86%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430 AGHQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+HR++N Sbjct: 59 AGHQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKIN 117 Score = 59.7 bits (138), Expect = 4e-08 Identities = 44/151 (29%), Positives = 64/151 (42%), Gaps = 1/151 (0%) Frame = +1 Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV-TRSW 258 ++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y V T++ Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60 Query: 259 SPNQC*IMGYWTCCRPNSACPWWWYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPX 438 + G S G P++ Sbjct: 61 HQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTE 120 Query: 439 AESGLGGSVAATGVPALVQARGHILKKISEL 531 + ++AATG P+LV ARGH + + EL Sbjct: 121 KRHAVAAAIAATGCPSLVMARGHRINNVPEL 151 >UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, putative; n=2; Theileria|Rep: 60S ribosomal subunit protein L4/L1, putative - Theileria annulata Length = 426 Score = 105 bits (253), Expect = 5e-22 Identities = 41/59 (69%), Positives = 50/59 (84%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430 +G+QTSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WHR++N Sbjct: 57 SGYQTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKIN 115 Score = 54.8 bits (126), Expect = 1e-06 Identities = 27/55 (49%), Positives = 37/55 (67%) Frame = +1 Query: 88 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTR 252 V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y ++R Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISR 55 >UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; Leishmania major strain Friedlin|Rep: Ribosomal protein L1a, putative - Leishmania major strain Friedlin Length = 432 Score = 105 bits (252), Expect = 6e-22 Identities = 45/59 (76%), Positives = 50/59 (84%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430 +G SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWHR++N Sbjct: 57 SGMNHSAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKIN 115 Score = 65.3 bits (152), Expect = 8e-10 Identities = 33/54 (61%), Positives = 38/54 (70%) Frame = +1 Query: 91 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTR 252 ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V R Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNR 55 >UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 - Streblomastix strix Length = 492 Score = 101 bits (242), Expect = 1e-20 Identities = 42/59 (71%), Positives = 47/59 (79%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430 AGHQ SAESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWHR VN Sbjct: 58 AGHQHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVN 116 Score = 38.7 bits (86), Expect = 0.083 Identities = 18/47 (38%), Positives = 30/47 (63%) Frame = +1 Query: 100 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 240 L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPF 52 >UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomonadaceae|Rep: 60s ribosomal protein L1 - Guillardia theta (Cryptomonas phi) Length = 255 Score = 100 bits (239), Expect = 2e-20 Identities = 43/73 (58%), Positives = 50/73 (68%) Frame = +2 Query: 212 LCPRTRGSPTA*QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFA 391 +C R AG TSA SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F Sbjct: 39 MCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFN 98 Query: 392 PTKPWRRWHRRVN 430 PT WR+WH ++N Sbjct: 99 PTTIWRKWHHKIN 111 >UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 - Encephalitozoon cuniculi Length = 335 Score = 97.1 bits (231), Expect = 2e-19 Identities = 44/69 (63%), Positives = 51/69 (73%) Frame = +2 Query: 221 RTRGSPTA*QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 400 +TR + AG Q SAESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK Sbjct: 44 KTRQPYAVSKNAGMQHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTK 103 Query: 401 PWRRWHRRV 427 RRW R+V Sbjct: 104 THRRWARKV 112 Score = 33.1 bits (72), Expect = 4.1 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = +1 Query: 103 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRS 255 ++ Y TV+ LP VF PIR DLV + +RQPY V+++ Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKN 54 >UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal protein L4 - Entamoeba histolytica HM-1:IMSS Length = 431 Score = 86.6 bits (205), Expect = 3e-16 Identities = 38/57 (66%), Positives = 45/57 (78%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRR 424 AG Q SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W R+ Sbjct: 58 AGKQHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRK 114 Score = 43.2 bits (97), Expect = 0.004 Identities = 21/49 (42%), Positives = 31/49 (63%) Frame = +1 Query: 91 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQP 237 +RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQP 51 >UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella natans|Rep: Ribosomal protein L4A - Bigelowiella natans (Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP 621)) Length = 278 Score = 79.4 bits (187), Expect = 5e-14 Identities = 31/59 (52%), Positives = 44/59 (74%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430 +G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+ + N Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTN 117 >UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein, putative - Trichomonas vaginalis G3 Length = 370 Score = 76.6 bits (180), Expect = 3e-13 Identities = 34/58 (58%), Positives = 40/58 (68%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRV 427 AG + SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW R V Sbjct: 55 AGKKVSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPV 112 Score = 38.7 bits (86), Expect = 0.083 Identities = 17/51 (33%), Positives = 36/51 (70%) Frame = +1 Query: 88 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 240 ++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPH 49 Score = 35.1 bits (77), Expect = 1.0 Identities = 18/38 (47%), Positives = 25/38 (65%) Frame = +1 Query: 418 PSRQPPXAESGLGGSVAATGVPALVQARGHILKKISEL 531 PSRQ A + ++AAT V LVQARGH+L ++ E+ Sbjct: 113 PSRQRKFA---IASAIAATAVVPLVQARGHVLGEVKEV 147 >UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia ATCC 50803 Length = 316 Score = 61.3 bits (142), Expect = 1e-08 Identities = 32/59 (54%), Positives = 36/59 (61%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430 AG Q +A SWG GRAVAR+PR G G GA+ N RGG M PT RRW R+VN Sbjct: 54 AGVQCTAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVN 106 Score = 44.8 bits (101), Expect = 0.001 Identities = 24/59 (40%), Positives = 32/59 (54%) Frame = +1 Query: 97 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRSWSPNQC 273 P V V+ V A P P VF P+RPD++N VH + K R PY V+R ++ QC Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSR-YAGVQC 58 >UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryarchaeota|Rep: 50S ribosomal protein L4P - Methanopyrus kandleri Length = 260 Score = 50.8 bits (116), Expect = 2e-05 Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHRRVN 430 AG +TSAESWG G VA +PRV+G +G+ A GG + APT P + W +RVN Sbjct: 52 AGFRTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVN 110 Score = 32.3 bits (70), Expect = 7.2 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = +1 Query: 97 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 240 P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPY 46 >UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED: similar to ribosomal protein L4 - Canis familiaris Length = 248 Score = 49.6 bits (113), Expect = 4e-05 Identities = 21/28 (75%), Positives = 24/28 (85%) Frame = +2 Query: 248 QGAGHQTSAESWGTGRAVARIPRVRGGG 331 + AG+QTSAESWGTGRA +PRVRGGG Sbjct: 46 ESAGYQTSAESWGTGRARGPMPRVRGGG 73 >UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum aerophilum Length = 283 Score = 47.2 bits (107), Expect = 2e-04 Identities = 25/61 (40%), Positives = 33/61 (54%) Frame = +2 Query: 248 QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRV 427 +GAG + S ES+G G +ARIPR +G R G F RGGR P K ++ H + Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEI 132 Query: 428 N 430 N Sbjct: 133 N 133 >UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum pernix Length = 272 Score = 43.6 bits (98), Expect = 0.003 Identities = 24/49 (48%), Positives = 30/49 (61%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 400 AG +TSA S G GR VAR+PR++G S + A NM RGGR P + Sbjct: 65 AGKRTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108 >UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarchaeota|Rep: 50S ribosomal protein L4P - Methanosphaera stadtmanae (strain DSM 3091) Length = 259 Score = 43.2 bits (97), Expect = 0.004 Identities = 23/59 (38%), Positives = 34/59 (57%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430 AG +T+AES+G+GR A +PRV+G S + AF GGR P + +H ++N Sbjct: 53 AGKRTTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKIN 106 >UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum symbiosum Length = 271 Score = 42.7 bits (96), Expect = 0.005 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Frame = +2 Query: 254 AGHQTSAESWG--TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRV 427 AG SA+S TG ARI R++GGG R G+ RGGR P K + H+++ Sbjct: 52 AGMDVSADSLNPPTGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKI 111 Query: 428 N 430 N Sbjct: 112 N 112 >UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; Leishmania|Rep: Putative uncharacterized protein - Leishmania major strain Friedlin Length = 534 Score = 41.5 bits (93), Expect = 0.012 Identities = 18/35 (51%), Positives = 20/35 (57%) Frame = +1 Query: 328 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 432 W VR C+R HV WW +VR E L LAP QP Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168 >UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F01.18; n=1; Oryza sativa (japonica cultivar-group)|Rep: Putative uncharacterized protein P0431F01.18 - Oryza sativa subsp. japonica (Rice) Length = 320 Score = 38.3 bits (85), Expect = 0.11 Identities = 25/55 (45%), Positives = 27/55 (49%) Frame = +2 Query: 215 CPRTRGSPTA*QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 379 CP R P GA H AE + T AR PR GGG HR GA G + RGG Sbjct: 177 CPCRRPHPP---GAPH-AEAEPF-TAPLRARRPRAAGGGKHRGAHGANGGVARGG 226 >UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarchaeota|Rep: 50S ribosomal protein L4P - Archaeoglobus fulgidus Length = 252 Score = 36.3 bits (80), Expect = 0.44 Identities = 20/59 (33%), Positives = 28/59 (47%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430 +G S E+WG G AR+PR + G + GGR P KP R+W ++N Sbjct: 52 SGVDYSWENWGPGHGYARVPRWKLG-----RRAVVVPQAVGGRRAHPPKPERKWAEKIN 105 >UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1; Ostreococcus tauri|Rep: Ribosomal protein RPL1/RPL2/RL4L4 - Ostreococcus tauri Length = 404 Score = 35.9 bits (79), Expect = 0.58 Identities = 15/29 (51%), Positives = 21/29 (72%) Frame = +1 Query: 139 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 225 GA+ +P VF +PIR D+VN VH ++KN Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43 >UniRef50_Q1IKS3 Cluster: Putative uncharacterized protein precursor; n=1; Acidobacteria bacterium Ellin345|Rep: Putative uncharacterized protein precursor - Acidobacteria bacterium (strain Ellin345) Length = 408 Score = 35.5 bits (78), Expect = 0.77 Identities = 21/60 (35%), Positives = 28/60 (46%) Frame = +2 Query: 197 MMFTFLCPRTRGSPTA*QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 376 MM + R +G+PTA AG +A + G A + R G G +S QG GN G Sbjct: 260 MMAQRIAARLKGTPTAGAAAGAPGAAATTGAPGAAGQGARQPGAGGEQSAQGGQGNWAGG 319 >UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus solfataricus Length = 267 Score = 35.5 bits (78), Expect = 0.77 Identities = 20/47 (42%), Positives = 27/47 (57%) Frame = +2 Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP 394 AG +TSAES+G +AR+PRV+ SG+ A GGR+ P Sbjct: 59 AGKRTSAESFGINLGMARVPRVK-----NSGEAALAPNTVGGRLAFP 100 >UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP00000014064; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064 - Strongylocentrotus purpuratus Length = 300 Score = 34.7 bits (76), Expect = 1.3 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -2 Query: 374 HDTCYRRHPDRTYEYHHHGHAEFGRQH 294 H+ YR H + +HHHGH+ G H Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132 >UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 263 Score = 34.3 bits (75), Expect = 1.8 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = -2 Query: 386 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQLLVT 243 TY+ H Y +HP T+ YHH H + ++ Q+P + H + VT Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTHRYHQHPQVT 158 Score = 32.7 bits (71), Expect = 5.4 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = -2 Query: 362 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQLLVT 243 Y +HP T+ YHH R H Q P I H + VT Sbjct: 75 YHQHPQVTHRYHHQHPQVTYRYHHQQPQITHRYHQHPQVT 114 >UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; n=1; Gibberella zeae PH-1|Rep: hypothetical protein FG01599.1 - Gibberella zeae PH-1 Length = 1347 Score = 33.9 bits (74), Expect = 2.3 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Frame = -2 Query: 383 YVHHD-TCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 270 Y H+D Y +H D + HHHG +G H + +H Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516 >UniRef50_A3C5V0 Cluster: Putative uncharacterized protein; n=2; Oryza sativa (japonica cultivar-group)|Rep: Putative uncharacterized protein - Oryza sativa subsp. japonica (Rice) Length = 327 Score = 33.9 bits (74), Expect = 2.3 Identities = 20/47 (42%), Positives = 24/47 (51%) Frame = +2 Query: 284 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRR 424 G +VAR R RGGG G G +G +G A +PWRR RR Sbjct: 241 GDEESVARASR-RGGGGGEEGHGGYGEEEQGE---AAARPWRRGRRR 283 >UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; Oryza sativa (japonica cultivar-group)|Rep: Putative uncharacterized protein - Oryza sativa subsp. japonica (Rice) Length = 150 Score = 33.9 bits (74), Expect = 2.3 Identities = 17/37 (45%), Positives = 19/37 (51%) Frame = +2 Query: 272 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 382 A+SW TGRA A + R R GG R A N G R Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72 >UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone THYMU3038687 - Homo sapiens (Human) Length = 189 Score = 33.9 bits (74), Expect = 2.3 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 5/71 (7%) Frame = +1 Query: 289 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPXAESGL 453 WT CR +AC W W++ V +GC W + H R+P E L Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138 Query: 454 GGSVAATGVPA 486 G+ + PA Sbjct: 139 HGAPSCLSTPA 149 >UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical protein - Nasonia vitripennis Length = 1628 Score = 33.5 bits (73), Expect = 3.1 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Frame = -2 Query: 359 RRHPDRTYEYHHHGHAEFGRQHVQ-YPMIQHWF 264 R PD + +HHHGH G HV+ YP F Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYPATDSLF 213 >UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2; Magnaporthe grisea|Rep: Putative uncharacterized protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea) Length = 578 Score = 33.1 bits (72), Expect = 4.1 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Frame = -2 Query: 392 GRTYVH-HDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQ 255 GR++ H H TC +HP + +HHH H H P H + D+ Sbjct: 455 GRSHNHDHHTC-GQHPSHHHHHHHHHHCSVSHSVHCDDPNHHHEYEDE 501 >UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; Burkholderia phytofirmans PsJN|Rep: Putative uncharacterized protein - Burkholderia phytofirmans PsJN Length = 753 Score = 32.7 bits (71), Expect = 5.4 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = -2 Query: 389 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQLL 249 R + HHD + +H R ++HHHGH GR+ H D+ L Sbjct: 443 RDHHHHD--HHQHDRRLRDHHHHGHRLRGRRRRDRHRRDHHHHDRCL 487 Score = 32.7 bits (71), Expect = 5.4 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -2 Query: 389 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 297 R + HHD C R R ++HHHGH GR+ Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506 >UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein; n=1; Bos taurus|Rep: PREDICTED: hypothetical protein - Bos taurus Length = 220 Score = 32.3 bits (70), Expect = 7.2 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 251 GAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 346 G G +T+ + G G AR+P RGG RSG Sbjct: 109 GGGRETATRAGGGGPRSARVPGCRGGARSRSG 140 >UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza sativa (japonica cultivar-group)|Rep: OSJNBa0004B13.22 protein - Oryza sativa subsp. japonica (Rice) Length = 248 Score = 32.3 bits (70), Expect = 7.2 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 411 VGTVASTSXSGERPWRQRCCYRRPSARS 494 +GT AS G+RPW R C+ R RS Sbjct: 106 IGTAASIFSGGQRPWACRSCHLRGGCRS 133 >UniRef50_UPI0000DB70FB Cluster: PREDICTED: similar to achintya CG8819-PA, isoform A; n=2; Endopterygota|Rep: PREDICTED: similar to achintya CG8819-PA, isoform A - Apis mellifera Length = 447 Score = 31.9 bits (69), Expect = 9.5 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -2 Query: 362 YRRHPDRTYEYHHHGHAEFGRQHVQY 285 YRRH + YHHH H R H +Y Sbjct: 53 YRRHYRNDHHYHHHHHHYHHRHHHRY 78 >UniRef50_Q6ZLN8 Cluster: Putative uncharacterized protein OJ1058_C08.13; n=2; Oryza sativa (japonica cultivar-group)|Rep: Putative uncharacterized protein OJ1058_C08.13 - Oryza sativa subsp. japonica (Rice) Length = 287 Score = 31.9 bits (69), Expect = 9.5 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Frame = +2 Query: 251 GAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC---RGGRMFAPTKPWRRWHR 421 GAG + WG A AR R G G + G G++ RGG +P RRW R Sbjct: 45 GAGVEDVGARWGEEAAAARKARGSGWG-QAAAAGVGGDVACRRRGGGRGRSCQPHRRWGR 103 Query: 422 RV 427 V Sbjct: 104 HV 105 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 530,212,997 Number of Sequences: 1657284 Number of extensions: 10886147 Number of successful extensions: 37177 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 34091 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 36706 length of database: 575,637,011 effective HSP length: 96 effective length of database: 416,537,747 effective search space used: 33739557507 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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