Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060167.seq
(534 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 135 1e-31
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 135 1e-31
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 135 1e-31
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 135 1e-31
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 135 1e-31
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 135 1e-31
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 135 1e-31
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 135 1e-31
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 135 1e-31
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 135 1e-31
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 135 1e-31
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 135 1e-31
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 135 1e-31
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 133 4e-31
AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens ... 34 0.36
BC090046-1|AAH90046.1| 666|Homo sapiens acyl-CoA synthetase bub... 30 5.9
BC022027-1|AAH22027.1| 666|Homo sapiens ACSBG2 protein protein. 30 5.9
AY358766-1|AAQ89126.1| 616|Homo sapiens PRTD-NY3 protein. 30 5.9
AY009107-1|AAG49398.1| 479|Homo sapiens PRTD-NY3 protein. 30 5.9
AK057412-1|BAB71476.1| 466|Homo sapiens protein ( Homo sapiens ... 30 5.9
AJ577571-5|CAE12157.1| 649|Homo sapiens bubblegum related prote... 30 5.9
AJ577571-4|CAE12156.1| 666|Homo sapiens bubblegum related prote... 30 5.9
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 135 bits (326), Expect = 1e-31
Identities = 58/59 (98%), Positives = 58/59 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 72.5 bits (170), Expect = 8e-13
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (326), Expect = 1e-31
Identities = 58/59 (98%), Positives = 58/59 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 72.5 bits (170), Expect = 8e-13
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (326), Expect = 1e-31
Identities = 58/59 (98%), Positives = 58/59 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 72.5 bits (170), Expect = 8e-13
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (326), Expect = 1e-31
Identities = 58/59 (98%), Positives = 58/59 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 72.5 bits (170), Expect = 8e-13
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (326), Expect = 1e-31
Identities = 58/59 (98%), Positives = 58/59 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 72.5 bits (170), Expect = 8e-13
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (326), Expect = 1e-31
Identities = 58/59 (98%), Positives = 58/59 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 72.5 bits (170), Expect = 8e-13
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (326), Expect = 1e-31
Identities = 58/59 (98%), Positives = 58/59 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 72.5 bits (170), Expect = 8e-13
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (326), Expect = 1e-31
Identities = 58/59 (98%), Positives = 58/59 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 72.5 bits (170), Expect = 8e-13
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (326), Expect = 1e-31
Identities = 58/59 (98%), Positives = 58/59 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 72.5 bits (170), Expect = 8e-13
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (326), Expect = 1e-31
Identities = 58/59 (98%), Positives = 58/59 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 72.5 bits (170), Expect = 8e-13
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 135 bits (326), Expect = 1e-31
Identities = 58/59 (98%), Positives = 58/59 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 72.5 bits (170), Expect = 8e-13
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVS 55
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 135 bits (326), Expect = 1e-31
Identities = 58/59 (98%), Positives = 58/59 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN
Sbjct: 72 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 130
Score = 72.9 bits (171), Expect = 6e-13
Identities = 34/57 (59%), Positives = 44/57 (77%)
Frame = +1
Query: 79 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 69
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 135 bits (326), Expect = 1e-31
Identities = 58/59 (98%), Positives = 58/59 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 72.5 bits (170), Expect = 8e-13
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 133 bits (321), Expect = 4e-31
Identities = 57/59 (96%), Positives = 57/59 (96%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVN 430
AGHQT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWHRRVN
Sbjct: 58 AGHQTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 74.5 bits (175), Expect = 2e-13
Identities = 35/56 (62%), Positives = 44/56 (78%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 249
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVS 55
>AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ46551 fis, clone THYMU3038687. ).
Length = 189
Score = 33.9 bits (74), Expect = 0.36
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +1
Query: 289 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPXAESGL 453
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 454 GGSVAATGVPA 486
G+ + PA
Sbjct: 139 HGAPSCLSTPA 149
>BC090046-1|AAH90046.1| 666|Homo sapiens acyl-CoA synthetase
bubblegum family member 2 protein.
Length = 666
Score = 29.9 bits (64), Expect = 5.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -3
Query: 130 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 8
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 274 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 314
>BC022027-1|AAH22027.1| 666|Homo sapiens ACSBG2 protein protein.
Length = 666
Score = 29.9 bits (64), Expect = 5.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -3
Query: 130 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 8
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 274 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 314
>AY358766-1|AAQ89126.1| 616|Homo sapiens PRTD-NY3 protein.
Length = 616
Score = 29.9 bits (64), Expect = 5.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -3
Query: 130 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 8
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 224 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 264
>AY009107-1|AAG49398.1| 479|Homo sapiens PRTD-NY3 protein.
Length = 479
Score = 29.9 bits (64), Expect = 5.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -3
Query: 130 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 8
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 87 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 127
>AK057412-1|BAB71476.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ32850 fis, clone TESTI2003419, moderately
similar to Homo sapiens very long-chain acyl-CoA
synthetase (BG1) ).
Length = 466
Score = 29.9 bits (64), Expect = 5.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -3
Query: 130 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 8
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 74 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 114
>AJ577571-5|CAE12157.1| 649|Homo sapiens bubblegum related protein
protein.
Length = 649
Score = 29.9 bits (64), Expect = 5.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -3
Query: 130 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 8
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 257 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 297
>AJ577571-4|CAE12156.1| 666|Homo sapiens bubblegum related protein
protein.
Length = 666
Score = 29.9 bits (64), Expect = 5.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -3
Query: 130 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 8
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 274 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 314
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,283,450
Number of Sequences: 237096
Number of extensions: 1669609
Number of successful extensions: 4941
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4880
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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