Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060165.seq
(460 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 39 0.004
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 39 0.004
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 39 0.004
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 39 0.004
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 39 0.004
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 39 0.004
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 36 0.026
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 36 0.026
AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-P... 36 0.026
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 36 0.026
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 36 0.026
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 33 0.14
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 33 0.18
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 33 0.18
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 33 0.18
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 33 0.24
AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA... 33 0.24
AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD... 32 0.43
AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB... 32 0.43
AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC... 32 0.43
AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic ac... 31 0.56
AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic ac... 31 0.56
AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE... 31 0.56
AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA... 31 0.56
X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subuni... 30 1.3
X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic acet... 30 1.3
AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p pro... 30 1.3
AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB... 30 1.3
AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA... 30 1.3
AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic ac... 30 1.7
BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p pro... 29 2.3
AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic ac... 29 2.3
AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic ac... 29 2.3
AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic ac... 29 2.3
X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D. m... 29 4.0
X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR... 29 4.0
M20316-1|AAA28311.1| 521|Drosophila melanogaster protein ( D.me... 29 4.0
AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA... 29 4.0
AE013599-450|AAF59230.1| 1379|Drosophila melanogaster CG2105-PA,... 28 6.9
AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,... 28 6.9
BT016153-1|AAV37038.1| 1767|Drosophila melanogaster AT16405p pro... 27 9.2
AE014134-1060|AAF52350.2| 1767|Drosophila melanogaster CG13991-P... 27 9.2
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 237 ELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 410
E + L WN+ +G L + RLW+PDV++ N+A G YA V NNGS +
Sbjct: 116 EWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCLY 175
Query: 411 I 413
+
Sbjct: 176 V 176
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 237 ELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 410
E + L WN+ +G L + RLW+PDV++ N+A G YA V NNGS +
Sbjct: 116 EWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCLY 175
Query: 411 I 413
+
Sbjct: 176 V 176
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 237 ELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 410
E + L WN+ +G L + RLW+PDV++ N+A G YA V NNGS +
Sbjct: 94 EWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCLY 153
Query: 411 I 413
+
Sbjct: 154 V 154
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 237 ELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 410
E + L WN+ +G L + RLW+PDV++ N+A G YA V NNGS +
Sbjct: 116 EWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCLY 175
Query: 411 I 413
+
Sbjct: 176 V 176
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 237 ELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 410
E + L WN+ +G L + RLW+PDV++ N+A G YA V NNGS +
Sbjct: 116 EWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCLY 175
Query: 411 I 413
+
Sbjct: 176 V 176
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 237 ELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 410
E + L WN+ +G L + RLW+PDV++ N+A G YA V NNGS +
Sbjct: 97 EWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCLY 156
Query: 411 I 413
+
Sbjct: 157 V 157
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 35.9 bits (79), Expect = 0.026
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 237 ELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 410
E + L WN +G L + R+W+PDV++ N+A G Y V NNGS +
Sbjct: 368 EWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCLY 427
Query: 411 I 413
+
Sbjct: 428 V 428
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 35.9 bits (79), Expect = 0.026
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 237 ELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 410
E + L WN +G L + R+W+PDV++ N+A G Y V NNGS +
Sbjct: 367 EWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCLY 426
Query: 411 I 413
+
Sbjct: 427 V 427
>AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-PA,
isoform A protein.
Length = 570
Score = 35.9 bits (79), Expect = 0.026
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 237 ELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 410
E + L WN +G L + R+W+PDV++ N+A G Y V NNGS +
Sbjct: 319 EWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCLY 378
Query: 411 I 413
+
Sbjct: 379 V 379
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 35.9 bits (79), Expect = 0.026
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 237 ELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 410
E + L WN +G L + R+W+PDV++ N+A G Y V NNGS +
Sbjct: 368 EWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCLY 427
Query: 411 I 413
+
Sbjct: 428 V 428
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 35.9 bits (79), Expect = 0.026
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 237 ELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 410
E + L WN +G L + R+W+PDV++ N+A G Y V NNGS +
Sbjct: 368 EWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCLY 427
Query: 411 I 413
+
Sbjct: 428 V 428
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +3
Query: 255 LSWNAGXWG-CSTWLVXSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 410
L WN +G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 86 LKWNPDDYGGVDTLHVPSEHIWHPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 139
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 255 LSWNAGXWGCSTWL-VXSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 410
L W +G L V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 68 LKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 121
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 255 LSWNAGXWGCSTWL-VXSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 410
L W +G L V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 87 LKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 140
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 255 LSWNAGXWGCSTWL-VXSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 410
L W +G L V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 87 LKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 140
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 32.7 bits (71), Expect = 0.24
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 255 LSWNAGXWGCSTWL-VXSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 410
L W +G L V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 102 LRWEPKEYGGVHMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEW 155
>AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA
protein.
Length = 567
Score = 32.7 bits (71), Expect = 0.24
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +3
Query: 255 LSWNAGXWG-CSTWLVXSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 410
L WN +G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 86 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 139
>AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD,
isoform D protein.
Length = 509
Score = 31.9 bits (69), Expect = 0.43
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 231 SNELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 404
S E + L WN +G L + +LW+PDV++ N+A G Y V +NGS
Sbjct: 98 SLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSC 157
Query: 405 SWI 413
++
Sbjct: 158 LYV 160
>AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB,
isoform B protein.
Length = 494
Score = 31.9 bits (69), Expect = 0.43
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 231 SNELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 404
S E + L WN +G L + +LW+PDV++ N+A G Y V +NGS
Sbjct: 83 SLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSC 142
Query: 405 SWI 413
++
Sbjct: 143 LYV 145
>AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC,
isoform C protein.
Length = 494
Score = 31.9 bits (69), Expect = 0.43
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 231 SNELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 404
S E + L WN +G L + +LW+PDV++ N+A G Y V +NGS
Sbjct: 83 SLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSC 142
Query: 405 SWI 413
++
Sbjct: 143 LYV 145
>AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type V
protein.
Length = 523
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 237 ELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 410
E + L WN +G L + +LW+PDV++ N+A G Y V +NGS +
Sbjct: 85 EWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSCLY 144
Query: 411 I 413
+
Sbjct: 145 V 145
>AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type I
protein.
Length = 494
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 237 ELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 410
E + L WN +G L + +LW+PDV++ N+A G Y V +NGS +
Sbjct: 85 EWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSCLY 144
Query: 411 I 413
+
Sbjct: 145 V 145
>AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE,
isoform E protein.
Length = 523
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 237 ELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 410
E + L WN +G L + +LW+PDV++ N+A G Y V +NGS +
Sbjct: 85 EWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSCLY 144
Query: 411 I 413
+
Sbjct: 145 V 145
>AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA,
isoform A protein.
Length = 494
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 237 ELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 410
E + L WN +G L + +LW+PDV++ N+A G Y V +NGS +
Sbjct: 85 EWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGSCLY 144
Query: 411 I 413
+
Sbjct: 145 V 145
>X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subunit
nicotinic acetylcholinereceptor precursor protein.
Length = 576
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +3
Query: 234 NELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAAATTAGDYAL----RARVSNNG 398
+E W+ +G T L V SE +W PD+VL N A G+Y + +A + G
Sbjct: 99 HEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTMTKAILHYTG 155
Query: 399 SVSW 410
V W
Sbjct: 156 KVVW 159
>X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic
acetylcholine receptoralpha subunit protein.
Length = 576
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +3
Query: 234 NELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAAATTAGDYAL----RARVSNNG 398
+E W+ +G T L V SE +W PD+VL N A G+Y + +A + G
Sbjct: 99 HEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTMTKAILHYTG 155
Query: 399 SVSW 410
V W
Sbjct: 156 KVVW 159
>AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p
protein.
Length = 576
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +3
Query: 234 NELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAAATTAGDYAL----RARVSNNG 398
+E W+ +G T L V SE +W PD+VL N A G+Y + +A + G
Sbjct: 99 HEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTMTKAILHYTG 155
Query: 399 SVSW 410
V W
Sbjct: 156 KVVW 159
>AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB,
isoform B protein.
Length = 576
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +3
Query: 234 NELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAAATTAGDYAL----RARVSNNG 398
+E W+ +G T L V SE +W PD+VL N A G+Y + +A + G
Sbjct: 99 HEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTMTKAILHYTG 155
Query: 399 SVSW 410
V W
Sbjct: 156 KVVW 159
>AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA,
isoform A protein.
Length = 576
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +3
Query: 234 NELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAAATTAGDYAL----RARVSNNG 398
+E W+ +G T L V SE +W PD+VL N A G+Y + +A + G
Sbjct: 99 HEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTMTKAILHYTG 155
Query: 399 SVSW 410
V W
Sbjct: 156 KVVW 159
>AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type III
protein.
Length = 494
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 231 SNELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 404
S E + L WN +G L + +LW+PDV++ N+A G Y V ++GS
Sbjct: 83 SLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHSGSC 142
Query: 405 SWI 413
++
Sbjct: 143 LYV 145
>BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p
protein.
Length = 508
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 231 SNELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 404
S E + L WN +G L + +LW+PDV++ N+A G Y V + GS
Sbjct: 97 SLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTSVVVKHGGSC 156
Query: 405 SWI 413
++
Sbjct: 157 LYV 159
>AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha6 protein.
Length = 494
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 231 SNELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 404
S E + L WN +G L + +LW+PDV++ N+A G Y V + GS
Sbjct: 83 SLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTSVVVKHGGSC 142
Query: 405 SWI 413
++
Sbjct: 143 LYV 145
>AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type IV
protein.
Length = 509
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 231 SNELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 404
S E + L WN +G L + +LW+PDV++ N+A G Y V +GS
Sbjct: 98 SLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKRSGSC 157
Query: 405 SWI 413
++
Sbjct: 158 LYV 160
>AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type II
protein.
Length = 494
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 231 SNELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 404
S E + L WN +G L + +LW+PDV++ N+A G Y V + GS
Sbjct: 83 SLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKHGGSC 142
Query: 405 SWI 413
++
Sbjct: 143 LYV 145
>X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D.
melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
gARD5) for nicotinicacetylcholine receptor. ).
Length = 521
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +3
Query: 255 LSWNAGXWG-CSTWLVXSERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWI 413
L W+ +G + +++W+PD+VL N A G+Y +R + + G V W+
Sbjct: 89 LQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPTGEVLWV 143
>X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR
protein.
Length = 521
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +3
Query: 255 LSWNAGXWG-CSTWLVXSERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWI 413
L W+ +G + +++W+PD+VL N A G+Y +R + + G V W+
Sbjct: 89 LQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPTGEVLWV 143
>M20316-1|AAA28311.1| 521|Drosophila melanogaster protein (
D.melanogaster acetylcholinereceptor-related protein
mRNA, complete cds. ).
Length = 521
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +3
Query: 255 LSWNAGXWG-CSTWLVXSERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWI 413
L W+ +G + +++W+PD+VL N A G+Y +R + + G V W+
Sbjct: 89 LQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPTGEVLWV 143
>AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA,
isoform A protein.
Length = 521
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +3
Query: 255 LSWNAGXWG-CSTWLVXSERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWI 413
L W+ +G + +++W+PD+VL N A G+Y +R + + G V W+
Sbjct: 89 LQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPTGEVLWV 143
>AE013599-450|AAF59230.1| 1379|Drosophila melanogaster CG2105-PA,
isoform A protein.
Length = 1379
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +1
Query: 58 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHVNIRESES 207
S + E A+SL+L ++SLL YD++ K V L L +I ES S
Sbjct: 28 SRSRSERASSLALPLNSLLDFYDKQQ-EQCKSVTLLPLPSNSGSISESSS 76
>AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,
isoform B protein.
Length = 1397
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +1
Query: 58 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHVNIRESES 207
S + E A+SL+L ++SLL YD++ K V L L +I ES S
Sbjct: 28 SRSRSERASSLALPLNSLLDFYDKQQ-EQCKSVTLLPLPSNSGSISESSS 76
>BT016153-1|AAV37038.1| 1767|Drosophila melanogaster AT16405p
protein.
Length = 1767
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -2
Query: 348 QPRLAVPRQASTSVPXTPAKCCSPXP 271
+ RLAVP++ +T++ TP + SP P
Sbjct: 357 EERLAVPQRYNTTIKDTPIETPSPPP 382
>AE014134-1060|AAF52350.2| 1767|Drosophila melanogaster CG13991-PA
protein.
Length = 1767
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -2
Query: 348 QPRLAVPRQASTSVPXTPAKCCSPXP 271
+ RLAVP++ +T++ TP + SP P
Sbjct: 357 EERLAVPQRYNTTIKDTPIETPSPPP 382
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,679,988
Number of Sequences: 53049
Number of extensions: 461604
Number of successful extensions: 1201
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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