Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060165.seq
(460 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 34 6e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 34 8e-04
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 34 8e-04
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 33 0.001
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 33 0.001
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 33 0.001
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 33 0.001
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 33 0.002
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 33 0.002
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 31 0.005
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 31 0.006
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.008
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.008
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.008
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.008
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.008
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 30 0.010
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 29 0.018
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.39
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 6.4
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 6.4
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 6.4
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 6.4
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 8.5
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 8.5
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 8.5
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 8.5
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 34.3 bits (75), Expect = 6e-04
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 255 LSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 413
+ WN +G L + RLW+PDV++ N+A G Y V NNG+ ++
Sbjct: 85 MRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYV 139
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 33.9 bits (74), Expect = 8e-04
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +3
Query: 255 LSWNAGXW-GCSTWLVXSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSWI 413
L WNA + G V R+WRPD +L N A + VS+ G V W+
Sbjct: 67 LKWNASEFAGIRVIRVPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 33.9 bits (74), Expect = 8e-04
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +3
Query: 255 LSWNAGXWGCSTWL-VXSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 410
L WN +G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 33.5 bits (73), Expect = 0.001
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 255 LSWNAGXWGCSTWL-VXSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 410
L W+ +G L V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 86 LKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 33.1 bits (72), Expect = 0.001
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 255 LSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 413
L WN +G L + +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 116 LQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 33.1 bits (72), Expect = 0.001
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 255 LSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 413
L WN +G L + +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 116 LQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 33.1 bits (72), Expect = 0.001
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 255 LSWNAGXWGCSTWL-VXSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 410
L W +G L V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 90 LRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.002
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 255 LSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 413
L WN +G L + +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 48 LQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYV 102
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 32.7 bits (71), Expect = 0.002
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +3
Query: 255 LSWNAGXWG-CSTWLVXSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 410
L WN +G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 82 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 135
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 31.5 bits (68), Expect = 0.005
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +3
Query: 234 NELDRQTLSWNAGXWGCSTWL-VXSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVS 407
+E W+ +G T L V SE +W PD+VL N A G + +A + G V
Sbjct: 75 HEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVL 134
Query: 408 W 410
W
Sbjct: 135 W 135
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 31.1 bits (67), Expect = 0.006
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +3
Query: 255 LSWNAGXWG-CSTWLVXSERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWI 413
L W+ +G + +++W+PD+VL N A G+Y +R + + NG V W+
Sbjct: 88 LQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 30.7 bits (66), Expect = 0.008
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 255 LSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 413
L WN +G L + +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 48 LQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 30.7 bits (66), Expect = 0.008
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 255 LSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 413
L WN +G L + +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 48 LQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 30.7 bits (66), Expect = 0.008
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 255 LSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 413
L WN +G L + +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 48 LQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 30.7 bits (66), Expect = 0.008
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 255 LSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 413
L WN +G L + +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 48 LQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 30.7 bits (66), Expect = 0.008
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 255 LSWNAGXWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 413
L WN +G L + +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 48 LQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 30.3 bits (65), Expect = 0.010
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +3
Query: 255 LSWNAGXWGCSTWL-VXSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 410
L W +G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 90 LRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 29.5 bits (63), Expect = 0.018
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +3
Query: 306 ERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPXSMQLDN 458
ER+WRPD N + + R+S +G + + RL I M+L N
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRN 168
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.39
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 16 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 120
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.0 bits (42), Expect = 6.4
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 306 ERLWRPDVVLLNAAATT 356
+ +WRPD NA + T
Sbjct: 116 KNMWRPDSFFKNAKSVT 132
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 6.4
Identities = 13/64 (20%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +1
Query: 76 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHV-NIRESESTVRILADLQMNW 243
N ++S ++DS +YD+ P+ + V +T+++ + ++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 244 IDKR 255
D R
Sbjct: 68 TDPR 71
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 6.4
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +1
Query: 76 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHVNIRESESTVRILADLQMN-- 240
N ++S ++DS +YD+ P+ + V +T+++ ++ SE + D
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSIS-SVSEVLMDFTLDFYFRQF 66
Query: 241 WIDKR 255
W D R
Sbjct: 67 WTDPR 71
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.0 bits (42), Expect = 6.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 114 RNVRSGVSPRLQNRS 158
R R +SPR++NRS
Sbjct: 729 RQHRDSLSPRVENRS 743
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 20.6 bits (41), Expect = 8.5
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 306 ERLWRPDVVLLNA 344
+ LW+PD LNA
Sbjct: 69 DSLWQPDPYFLNA 81
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 8.5
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 369 ALRARVSNNGSVSWIK 416
ALR N G ++W K
Sbjct: 240 ALRCLAHNGGEIAWTK 255
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 8.5
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 369 ALRARVSNNGSVSWIK 416
ALR N G ++W K
Sbjct: 240 ALRCLAHNGGEIAWTK 255
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 8.5
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 369 ALRARVSNNGSVSWIK 416
ALR N G ++W K
Sbjct: 240 ALRCLAHNGGEIAWTK 255
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,819
Number of Sequences: 438
Number of extensions: 2751
Number of successful extensions: 27
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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