Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060164.seq
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    27   0.087
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    27   0.11 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    26   0.26 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   1.4  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   2.5  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   5.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.7  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.5  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   9.9  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   9.9  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 27.5 bits (58), Expect = 0.087
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 42  LVFTCVDLRVHNKFKNTLISELISLYDEEGR-TLEQWIGQK 161
           L  TC +L ++   ++ L  E+  +Y+E G  T E  +G K
Sbjct: 307 LALTCYELSLNKTIQDRLRHEVTEIYNENGEFTYENILGMK 347


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 313 HGAPYPTTQGAPYPT 357
           +GAPYP+T   PYP+
Sbjct: 10  YGAPYPSTDQNPYPS 24



 Score = 26.2 bits (55), Expect = 0.20
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 340 GAPYPTTQGAPYPT 381
           GAPYP+T   PYP+
Sbjct: 11  GAPYPSTDQNPYPS 24



 Score = 25.4 bits (53), Expect = 0.35
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 364 GAPYPTTQGLPYP 402
           GAPYP+T   PYP
Sbjct: 11  GAPYPSTDQNPYP 23



 Score = 24.2 bits (50), Expect = 0.81
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 292 GVPYPATHGAPYPT 333
           G PYP+T   PYP+
Sbjct: 11  GAPYPSTDQNPYPS 24



 Score = 22.6 bits (46), Expect = 2.5
 Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
 Frame = +1

Query: 388 GLPYPVAQSVPYP---VAQSAPYPVAQNAPY 471
           G PYP     PYP   V  SA Y    N PY
Sbjct: 11  GAPYPSTDQNPYPSIGVESSAFYSPLSN-PY 40



 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 463 APYPTTQGAPYLRTHVRLTQFH 528
           APYP+T   PY    V  + F+
Sbjct: 12  APYPSTDQNPYPSIGVESSAFY 33



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 439 APYPVAQNAPYPT 477
           APYP     PYP+
Sbjct: 12  APYPSTDQNPYPS 24


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 16/62 (25%), Positives = 27/62 (43%)
 Frame = +1

Query: 316 GAPYPTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPY 495
           G  YP  + A + T  G+     + +P PV +    P +  AP P +++        A Y
Sbjct: 369 GTKYPILK-AIHQTLGGSSNEIVEPVPQPVEEVTQKPSSTKAPAPPSRDLTTTLCTKAGY 427

Query: 496 LR 501
           +R
Sbjct: 428 VR 429


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = +1

Query: 283 PTQGVPYPATHGAPYPTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSA 441
           PT G  Y A   A     + A +P+ +G P          ++   P P+A +A
Sbjct: 7   PTAGQLYGAQIPAMSMNVKAAEHPSLRGTPLAMLAAQCNKLSNKSPPPLADAA 59


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 19/84 (22%), Positives = 29/84 (34%)
 Frame = +1

Query: 271 NAPYPTQGVPYPATHGAPYPTTQGAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYP 450
           ++ YP   +  P    +  P     P   TQG   P+  G  Y        P  Q  P  
Sbjct: 163 SSSYPANEISCPQVQWSATPQAGSTPTYQTQGLLSPSYGGTTYSFTADFRPP--QETPV- 219

Query: 451 VAQNAPYPTTQGAPYLRTHVRLTQ 522
           +A     P +  +P  R  + L +
Sbjct: 220 LASYKSVPMSFSSPRRRHSINLLE 243


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/35 (31%), Positives = 13/35 (37%)
 Frame = -2

Query: 487 HPALSGMAHSEQPDMAHSEQPGMAHSEQLGMVDPE 383
           HP LS + HS  P  A  E             DP+
Sbjct: 111 HPYLSPLFHSAAPRTASRETKSSESDSGASSADPD 145


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
 Frame = +3

Query: 315 RCAIPDNSGCSIPDNSGCAIP-DNSGSTIP 401
           RC +P    C +P       P ++  S IP
Sbjct: 198 RCVVPPTEDCDVPSTIPPPPPEEDDDSNIP 227


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 316 GAPYPTTQGAPYPTTQGAPYPTTQGLPYP 402
           G+  P +  +P P  + A  PT   +P P
Sbjct: 35  GSMTPNSAASPAPPEEEAASPTPGDVPTP 63


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -3

Query: 459 LSNRIWRTLSNRVWHTLSNWVW*TLSCRVWRTL 361
           LS  +   L++ +W T   W    ++C+V R L
Sbjct: 71  LSVGLINVLTDIIWKTTVAWYAGNVACKVIRFL 103


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 270 QCALPDSGCAIPG 308
           QC LPD  C+  G
Sbjct: 159 QCVLPDCFCSADG 171


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 270 QCALPDSGCAIPG 308
           QC LPD  C+  G
Sbjct: 166 QCVLPDCFCSADG 178


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +1

Query: 403 VAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYLR 501
           + ++ P PV+ +     + +A  P+   AP+LR
Sbjct: 151 LTKTSPTPVSINNNTSTSSSASSPSVTAAPHLR 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,085
Number of Sequences: 336
Number of extensions: 3506
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)