Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060163.seq
         (563 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1591|AAF52734.1|  275|Drosophila melanogaster CG9555-PA...    30   1.9  
BT023370-1|AAY55786.1|  221|Drosophila melanogaster IP10355p pro...    30   2.5  
BT023270-1|AAY55686.1|  370|Drosophila melanogaster IP10055p pro...    30   2.5  
AE014297-3244|AAF56072.1|  272|Drosophila melanogaster CG6660-PA...    30   2.5  
AY069169-1|AAL39314.1|  461|Drosophila melanogaster GH20973p pro...    29   4.3  
AE013599-4017|AAM68328.1|  461|Drosophila melanogaster CG2679-PB...    29   4.3  

>AE014134-1591|AAF52734.1|  275|Drosophila melanogaster CG9555-PA
           protein.
          Length = 275

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 361 LLFIISWITPSLVMSTVCGC 302
           + FI+ W  P L + TVCGC
Sbjct: 210 IYFILDWERPGLAIGTVCGC 229


>BT023370-1|AAY55786.1|  221|Drosophila melanogaster IP10355p
           protein.
          Length = 221

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = -1

Query: 335 TLLGDEHCVRLQVQWVTLLDH-VVWSRGYGIDPDSLYVVLYFLSTLTITACLQFTYFKLL 159
           T LG  HC  L +  + LL H V+++  Y     ++  +L++   +T    +QF Y    
Sbjct: 110 TFLGGSHCSMLGI--INLLVHTVMYAYYYAASLGAVKNLLWWKQRITQLQLMQFGYLTFH 167

Query: 158 AMSLATNLTCRFP 120
            + +     C+FP
Sbjct: 168 FLLVIVRNPCQFP 180


>BT023270-1|AAY55686.1|  370|Drosophila melanogaster IP10055p
           protein.
          Length = 370

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = -1

Query: 335 TLLGDEHCVRLQVQWVTLLDH-VVWSRGYGIDPDSLYVVLYFLSTLTITACLQFTYFKLL 159
           T LG  HC  L +  + LL H V+++  Y     ++  +L++   +T    +QF Y    
Sbjct: 259 TFLGGSHCSMLGI--INLLVHTVMYAYYYAASLGAVKNLLWWKQRITQLQLMQFGYLTFH 316

Query: 158 AMSLATNLTCRFP 120
            + +     C+FP
Sbjct: 317 FLLVIVRNPCQFP 329


>AE014297-3244|AAF56072.1|  272|Drosophila melanogaster CG6660-PA
           protein.
          Length = 272

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = -1

Query: 335 TLLGDEHCVRLQVQWVTLLDH-VVWSRGYGIDPDSLYVVLYFLSTLTITACLQFTYFKLL 159
           T LG  HC  L +  + LL H V+++  Y     ++  +L++   +T    +QF Y    
Sbjct: 161 TFLGGSHCSMLGI--INLLVHTVMYAYYYAASLGAVKNLLWWKQRITQLQLMQFGYLTFH 218

Query: 158 AMSLATNLTCRFP 120
            + +     C+FP
Sbjct: 219 FLLVIVRNPCQFP 231


>AY069169-1|AAL39314.1|  461|Drosophila melanogaster GH20973p
           protein.
          Length = 461

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +1

Query: 103 RYVLEQGNLQVKFVAKDIASSLKYVNCKQAVIVNVDKKYKTTYS 234
           + V++   +Q+K   ++IA+ + Y N  Q + + +DK Y  T S
Sbjct: 173 KQVMQLEKMQIKGKTRNIAAVITYQNIGQDLSLTLDKGYNVTIS 216


>AE013599-4017|AAM68328.1|  461|Drosophila melanogaster CG2679-PB,
           isoform B protein.
          Length = 461

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +1

Query: 103 RYVLEQGNLQVKFVAKDIASSLKYVNCKQAVIVNVDKKYKTTYS 234
           + V++   +Q+K   ++IA+ + Y N  Q + + +DK Y  T S
Sbjct: 173 KQVMQLEKMQIKGKTRNIAAVITYQNIGQDLSLTLDKGYNVTIS 216


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,466,795
Number of Sequences: 53049
Number of extensions: 523492
Number of successful extensions: 1083
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)