Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060160.seq
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    30   0.057
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    23   8.7  

>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 30.3 bits (65), Expect = 0.057
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = -2

Query: 407 QSHLFTFYDYFKLFYIPFIFI*PLLNTKTQKKLAKFRSNRMSI 279
           Q+ +F F D+  +F +PF  I  +LNT T   + KF S R ++
Sbjct: 280 QAAMFNFLDFILVFVVPFTII-VVLNTITALTVWKFASIRRTM 321


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 571 TMSASNGKRIFQIGPVVSEPIET 503
           T++ S G+R   +GP  SE + +
Sbjct: 509 TIAGSTGERFQDLGPAASESVRS 531


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,693
Number of Sequences: 2352
Number of extensions: 8947
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)