Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060157.seq
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione S-tran...    28   0.31 
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   2.2  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   2.9  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   5.0  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   8.8  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   8.8  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     23   8.8  

>AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione
           S-transferase u2 protein.
          Length = 222

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +1

Query: 136 ISDNFQEKRRKPISRTPHYTRRRDVGDAETATLLPLRLAPMPWAMLH 276
           ISD  +   +K ++   HY  R D    E  T+  L L P   + +H
Sbjct: 126 ISDEMKTTTQKALTDLEHYLTRNDYFAGENLTIADLSLVPTIASAVH 172


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 343 LETARQLKRAHGFQEGRGPSHAKGAHRTPLEAHQNGAE 456
           L  A  + ++   Q GR PS A  A  T   +H N A+
Sbjct: 6   LTVAGMMVKSEASQTGRSPSAAGTATTTTSPSHSNAAK 43



 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -1

Query: 544 PALAVGRGW 518
           PALA GRGW
Sbjct: 547 PALATGRGW 555


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 445 NGAETTRGQPAPPAHHT 495
           +G ++TRG PAP + H+
Sbjct: 25  SGLDSTRGSPAPGSRHS 41


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +1

Query: 370 AHGFQEGRGPSHAKGAHRTPLEAHQNGAETTRGQPAPP 483
           A G Q  RGP   KG      +  + G +   GQ  PP
Sbjct: 228 APGIQGVRGPQGVKGEPGEKGDRGEIGVKGLMGQSGPP 265


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 393  WSVACKRSTPYALRSPSKWSRNNKRTTCTS 482
            WS + +R  P+   S  KW+ NN + + TS
Sbjct: 1648 WS-SIRRPGPFG--SKQKWNSNNNKMSATS 1674


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = +1

Query: 388 GRGPSHAKGAHRTPLEAHQNGAETTRGQPAPPAH 489
           G    H    H  P  + Q  + + R  P PP H
Sbjct: 179 GHSQHHHHHHHHHPHHSQQQHSASPRCYPMPPEH 212


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +2

Query: 170 RSLALRTTPGGEMSVMQKRQHCYLCDLPP 256
           RSL L +  GG      K  H YL   PP
Sbjct: 140 RSLVLMSVQGGASKQALKYYHYYLEGQPP 168


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,793
Number of Sequences: 2352
Number of extensions: 13362
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)