Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060157.seq
         (676 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ277365-1|CAC10539.1|  796|Homo sapiens polyglutamine-containin...    92   2e-18
AY278024-1|AAP78945.1|  571|Homo sapiens interferon regulatory f...    88   2e-17
AY278023-1|AAP78944.1|  587|Homo sapiens interferon regulatory f...    88   2e-17
AL160408-2|CAI22768.1|  571|Homo sapiens interferon regulatory f...    88   2e-17
AL160408-1|CAI22767.1|  587|Homo sapiens interferon regulatory f...    88   2e-17
BC039002-1|AAH39002.1|  584|Homo sapiens interferon regulatory f...    85   2e-16
BC038222-1|AAH38222.1|  584|Homo sapiens interferon regulatory f...    85   2e-16
AY278022-1|AAP78943.1|  584|Homo sapiens interferon regulatory f...    85   2e-16
AK223622-1|BAD97342.1|  584|Homo sapiens interferon regulatory f...    85   2e-16
BC078181-1|AAH78181.1|  584|Homo sapiens interferon regulatory f...    83   7e-16
BC107729-1|AAI07730.1|  178|Homo sapiens ZSCAN1 protein protein.       32   2.1  
BC048099-1|AAH48099.1|  178|Homo sapiens ZSCAN1 protein protein.       32   2.1  
AF490839-1|AAM33254.1| 1093|Homo sapiens RGS3 isoform C2PA-RGS3 ...    31   2.8  
AY280370-1|AAQ16582.1|  178|Homo sapiens zinc finger protein pro...    31   3.7  

>AJ277365-1|CAC10539.1|  796|Homo sapiens polyglutamine-containing
           protein protein.
          Length = 796

 Score = 91.9 bits (218), Expect = 2e-18
 Identities = 48/83 (57%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
 Frame = +1

Query: 247 LAPMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHG-FQEGR--GPSHAKGA 417
           L  MPWAM+ +FSE VCRGCVNYEGADRIE V+ETARQLKRAHG FQ+GR  GP    G 
Sbjct: 19  LPRMPWAMIWDFSEPVCRGCVNYEGADRIEFVIETARQLKRAHGCFQDGRSPGPPPPVGV 78

Query: 418 HRTPLEAHQNGAETTRGQPAPPA 486
               L A +  A       A  A
Sbjct: 79  KTVALSAKEAAAAAAAAAAAAAA 101


>AY278024-1|AAP78945.1|  571|Homo sapiens interferon regulatory
           factor-2 binding protein 2B protein.
          Length = 571

 Score = 88.2 bits (209), Expect = 2e-17
 Identities = 40/55 (72%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
 Frame = +1

Query: 247 LAPMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHG-FQEGRGPSHA 408
           L  MPWAM+ +F+E VCRGCVNYEGADR+E V+ETARQLKRAHG F EGR P  A
Sbjct: 21  LPRMPWAMIWDFTEPVCRGCVNYEGADRVEFVIETARQLKRAHGCFPEGRSPPGA 75


>AY278023-1|AAP78944.1|  587|Homo sapiens interferon regulatory
           factor-2 binding protein 2A protein.
          Length = 587

 Score = 88.2 bits (209), Expect = 2e-17
 Identities = 40/55 (72%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
 Frame = +1

Query: 247 LAPMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHG-FQEGRGPSHA 408
           L  MPWAM+ +F+E VCRGCVNYEGADR+E V+ETARQLKRAHG F EGR P  A
Sbjct: 21  LPRMPWAMIWDFTEPVCRGCVNYEGADRVEFVIETARQLKRAHGCFPEGRSPPGA 75


>AL160408-2|CAI22768.1|  571|Homo sapiens interferon regulatory
           factor 2 binding protein 2 protein.
          Length = 571

 Score = 88.2 bits (209), Expect = 2e-17
 Identities = 40/55 (72%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
 Frame = +1

Query: 247 LAPMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHG-FQEGRGPSHA 408
           L  MPWAM+ +F+E VCRGCVNYEGADR+E V+ETARQLKRAHG F EGR P  A
Sbjct: 21  LPRMPWAMIWDFTEPVCRGCVNYEGADRVEFVIETARQLKRAHGCFPEGRSPPGA 75


>AL160408-1|CAI22767.1|  587|Homo sapiens interferon regulatory
           factor 2 binding protein 2 protein.
          Length = 587

 Score = 88.2 bits (209), Expect = 2e-17
 Identities = 40/55 (72%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
 Frame = +1

Query: 247 LAPMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHG-FQEGRGPSHA 408
           L  MPWAM+ +F+E VCRGCVNYEGADR+E V+ETARQLKRAHG F EGR P  A
Sbjct: 21  LPRMPWAMIWDFTEPVCRGCVNYEGADRVEFVIETARQLKRAHGCFPEGRSPPGA 75


>BC039002-1|AAH39002.1|  584|Homo sapiens interferon regulatory
           factor 2 binding protein 1 protein.
          Length = 584

 Score = 85.0 bits (201), Expect = 2e-16
 Identities = 41/84 (48%), Positives = 51/84 (60%)
 Frame = +1

Query: 247 LAPMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGFQEGRGPSHAKGAHRT 426
           L  MPWAM+ +FSEAVCRGCVN+EGADRIE++++ ARQLKR+H   EGR P      H  
Sbjct: 17  LPKMPWAMVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHVLPEGRSPGPPALKHPA 76

Query: 427 PLEAHQNGAETTRGQPAPPAHHTP 498
             +     A   +G   PP    P
Sbjct: 77  TKDL---AAAAAQGPQLPPPQAQP 97


>BC038222-1|AAH38222.1|  584|Homo sapiens interferon regulatory
           factor 2 binding protein 1 protein.
          Length = 584

 Score = 85.0 bits (201), Expect = 2e-16
 Identities = 41/84 (48%), Positives = 51/84 (60%)
 Frame = +1

Query: 247 LAPMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGFQEGRGPSHAKGAHRT 426
           L  MPWAM+ +FSEAVCRGCVN+EGADRIE++++ ARQLKR+H   EGR P      H  
Sbjct: 17  LPKMPWAMVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHVLPEGRSPGPPALKHPA 76

Query: 427 PLEAHQNGAETTRGQPAPPAHHTP 498
             +     A   +G   PP    P
Sbjct: 77  TKDL---AAAAAQGPQLPPPQAQP 97


>AY278022-1|AAP78943.1|  584|Homo sapiens interferon regulatory
           factor-2 binding protein 1 protein.
          Length = 584

 Score = 85.0 bits (201), Expect = 2e-16
 Identities = 41/84 (48%), Positives = 51/84 (60%)
 Frame = +1

Query: 247 LAPMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGFQEGRGPSHAKGAHRT 426
           L  MPWAM+ +FSEAVCRGCVN+EGADRIE++++ ARQLKR+H   EGR P      H  
Sbjct: 17  LPKMPWAMVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHVLPEGRSPGPPALKHPA 76

Query: 427 PLEAHQNGAETTRGQPAPPAHHTP 498
             +     A   +G   PP    P
Sbjct: 77  TKDL---AAAAAQGPQLPPPQAQP 97


>AK223622-1|BAD97342.1|  584|Homo sapiens interferon regulatory
           factor 2 binding protein 1 variant protein.
          Length = 584

 Score = 85.0 bits (201), Expect = 2e-16
 Identities = 41/84 (48%), Positives = 51/84 (60%)
 Frame = +1

Query: 247 LAPMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGFQEGRGPSHAKGAHRT 426
           L  MPWAM+ +FSEAVCRGCVN+EGADRIE++++ ARQLKR+H   EGR P      H  
Sbjct: 17  LPKMPWAMVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHVLPEGRSPGPPALKHPA 76

Query: 427 PLEAHQNGAETTRGQPAPPAHHTP 498
             +     A   +G   PP    P
Sbjct: 77  TKDP---AAAAAQGPQLPPPQAQP 97


>BC078181-1|AAH78181.1|  584|Homo sapiens interferon regulatory
           factor 2 binding protein 1 protein.
          Length = 584

 Score = 83.4 bits (197), Expect = 7e-16
 Identities = 40/84 (47%), Positives = 51/84 (60%)
 Frame = +1

Query: 247 LAPMPWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGFQEGRGPSHAKGAHRT 426
           L  MPWA++ +FSEAVCRGCVN+EGADRIE++++ ARQLKR+H   EGR P      H  
Sbjct: 17  LPKMPWAIVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHVLPEGRSPGPPALKHPA 76

Query: 427 PLEAHQNGAETTRGQPAPPAHHTP 498
             +     A   +G   PP    P
Sbjct: 77  TKDL---AAAAAQGPQLPPPQAQP 97


>BC107729-1|AAI07730.1|  178|Homo sapiens ZSCAN1 protein protein.
          Length = 178

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 151 QEKRRKPISRTPHYTRRRDVGDAETATLLPLRLAPMPWAMLHEFSEAVCRGCV-NY 315
           QE  R+ + R P   R  DV +  TA LLP  +AP P   L      + RGCV NY
Sbjct: 122 QEGERRRL-RAPGRARGPDVSEDRTA-LLPAHIAPTPARPLPTSKPLLPRGCVFNY 175


>BC048099-1|AAH48099.1|  178|Homo sapiens ZSCAN1 protein protein.
          Length = 178

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 151 QEKRRKPISRTPHYTRRRDVGDAETATLLPLRLAPMPWAMLHEFSEAVCRGCV-NY 315
           QE  R+ + R P   R  DV +  TA LLP  +AP P   L      + RGCV NY
Sbjct: 122 QEGERRRL-RAPGRARGPDVSEDRTA-LLPAHIAPTPARPLPTSKPLLPRGCVFNY 175


>AF490839-1|AAM33254.1| 1093|Homo sapiens RGS3 isoform C2PA-RGS3
           protein.
          Length = 1093

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +1

Query: 340 VLETARQLKRAHGFQEGRGPSHAKGAHRTPLEAHQNGAETTRGQPAPPAHHTPT 501
           + ET    KR    +EG+GP    GA  +P +    G E   GQ  PP   +P+
Sbjct: 576 MFETEADEKREMALEEGKGP----GAEDSPSKEPSPGQELPPGQDLPPNKDSPS 625


>AY280370-1|AAQ16582.1|  178|Homo sapiens zinc finger protein
           protein.
          Length = 178

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +1

Query: 154 EKRRKPISRTPHYTRRRDVGDAETATLLPLRLAPMPWAMLHEFSEAVCRGCV-NY 315
           E+RR P    P   R  DV +  TA LLP  +AP P   L      + RGCV NY
Sbjct: 125 ERRRLP---APGRARGPDVSEDRTA-LLPAHIAPTPARPLPTSKPLLPRGCVFNY 175


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,350,974
Number of Sequences: 237096
Number of extensions: 2003372
Number of successful extensions: 5748
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5747
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)