Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060157.seq
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 64 9e-11
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 64 9e-11
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 30 1.3
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 30 1.3
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 30 1.3
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 30 1.3
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 30 1.3
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 30 1.3
Z74033-2|CAA98476.2| 419|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z74033-1|CAA98475.2| 460|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF022973-11|AAK84524.3| 560|Caenorhabditis elegans Hypothetical... 29 4.0
Z50858-6|CAD44135.1| 949|Caenorhabditis elegans Hypothetical pr... 28 5.3
AL021567-6|CAD44122.1| 949|Caenorhabditis elegans Hypothetical ... 28 5.3
AL021567-2|CAD44121.1| 947|Caenorhabditis elegans Hypothetical ... 28 5.3
AL021567-1|CAA16508.2| 898|Caenorhabditis elegans Hypothetical ... 28 5.3
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 28 7.0
Z81142-2|CAB03504.1| 337|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF068713-4|AAC17795.2| 398|Caenorhabditis elegans Hypothetical ... 27 9.2
AF016419-3|AAG24048.1| 529|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 64.1 bits (149), Expect = 9e-11
Identities = 31/67 (46%), Positives = 42/67 (62%)
Frame = +1
Query: 259 PWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGFQEGRGPSHAKGAHRTPLEA 438
PWA+++++ E VCRGCVNYEG+DRIE+VLE RQ K+ G P +AK + R
Sbjct: 61 PWAIINDYIEPVCRGCVNYEGSDRIELVLEETRQQKKLQGVGIS-DPQNAKTSLRDITLT 119
Query: 439 HQNGAET 459
Q +T
Sbjct: 120 QQQPLQT 126
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 64.1 bits (149), Expect = 9e-11
Identities = 31/67 (46%), Positives = 42/67 (62%)
Frame = +1
Query: 259 PWAMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGFQEGRGPSHAKGAHRTPLEA 438
PWA+++++ E VCRGCVNYEG+DRIE+VLE RQ K+ G P +AK + R
Sbjct: 88 PWAIINDYIEPVCRGCVNYEGSDRIELVLEETRQQKKLQGVGIS-DPQNAKTSLRDITLT 146
Query: 439 HQNGAET 459
Q +T
Sbjct: 147 QQQPLQT 153
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical protein
C36B1.1d protein.
Length = 1175
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +1
Query: 325 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 495
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 823 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 882
Query: 496 PTVGLRYTIH 525
T G +H
Sbjct: 883 LTTGTAVNVH 892
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +1
Query: 325 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 495
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 426 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 485
Query: 496 PTVGLRYTIH 525
T G +H
Sbjct: 486 LTTGTAVNVH 495
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +1
Query: 325 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 495
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 786 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 845
Query: 496 PTVGLRYTIH 525
T G +H
Sbjct: 846 LTTGTAVNVH 855
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +1
Query: 325 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 495
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 298 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 357
Query: 496 PTVGLRYTIH 525
T G +H
Sbjct: 358 LTTGTAVNVH 367
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +1
Query: 325 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 495
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 823 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 882
Query: 496 PTVGLRYTIH 525
T G +H
Sbjct: 883 LTTGTAVNVH 892
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +1
Query: 325 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 495
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 426 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 485
Query: 496 PTVGLRYTIH 525
T G +H
Sbjct: 486 LTTGTAVNVH 495
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +1
Query: 325 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 495
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 786 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 845
Query: 496 PTVGLRYTIH 525
T G +H
Sbjct: 846 LTTGTAVNVH 855
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +1
Query: 325 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 495
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 298 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 357
Query: 496 PTVGLRYTIH 525
T G +H
Sbjct: 358 LTTGTAVNVH 367
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +1
Query: 325 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 495
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 426 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 485
Query: 496 PTVGLRYTIH 525
T G +H
Sbjct: 486 LTTGTAVNVH 495
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +1
Query: 325 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 495
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 765 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 824
Query: 496 PTVGLRYTIH 525
T G +H
Sbjct: 825 LTTGTAVNVH 834
>Z74033-2|CAA98476.2| 419|Caenorhabditis elegans Hypothetical
protein F38B7.1b protein.
Length = 419
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 393 WSVACKRSTPYALRSPSKWSRNNKRTTCTSSSP 491
W++ STP++ PSKWS + T+ +++P
Sbjct: 370 WNIEDSLSTPFSGFLPSKWSTTTEETSPATTTP 402
>Z74033-1|CAA98475.2| 460|Caenorhabditis elegans Hypothetical
protein F38B7.1a protein.
Length = 460
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 393 WSVACKRSTPYALRSPSKWSRNNKRTTCTSSSP 491
W++ STP++ PSKWS + T+ +++P
Sbjct: 411 WNIEDSLSTPFSGFLPSKWSTTTEETSPATTTP 443
>AF022973-11|AAK84524.3| 560|Caenorhabditis elegans Hypothetical
protein F25G6.1 protein.
Length = 560
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +2
Query: 23 CLLCSGNKQLSSAKSNVKFCVFICDYHGDSVFSRRHNKSV 142
CLL G L + CDYH S+ S ++ K V
Sbjct: 353 CLLMDGESSLGEYGKTLDVMTIRCDYHIFSLMSHKYGKPV 392
>Z50858-6|CAD44135.1| 949|Caenorhabditis elegans Hypothetical
protein F21A10.2c protein.
Length = 949
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 242 CDLPPCRGQCCMSFQKQCVE 301
C + CRG CCM + K E
Sbjct: 747 CPMETCRGYCCMEYDKDHAE 766
>AL021567-6|CAD44122.1| 949|Caenorhabditis elegans Hypothetical
protein F21A10.2c protein.
Length = 949
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 242 CDLPPCRGQCCMSFQKQCVE 301
C + CRG CCM + K E
Sbjct: 747 CPMETCRGYCCMEYDKDHAE 766
>AL021567-2|CAD44121.1| 947|Caenorhabditis elegans Hypothetical
protein F21A10.2b protein.
Length = 947
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 242 CDLPPCRGQCCMSFQKQCVE 301
C + CRG CCM + K E
Sbjct: 745 CPMETCRGYCCMEYDKDHAE 764
>AL021567-1|CAA16508.2| 898|Caenorhabditis elegans Hypothetical
protein F21A10.2a protein.
Length = 898
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 242 CDLPPCRGQCCMSFQKQCVE 301
C + CRG CCM + K E
Sbjct: 696 CPMETCRGYCCMEYDKDHAE 715
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 391 RGPSHAKGAHRTPLEAHQNGAETTRGQPAPP 483
RGP AKG P A G RG P PP
Sbjct: 194 RGPPGAKGQTYLPGSAGHPGNSGRRGPPGPP 224
>Z81142-2|CAB03504.1| 337|Caenorhabditis elegans Hypothetical
protein ZK1037.5 protein.
Length = 337
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 398 RRMQKEHTVRP*KPIKMEQKQQEDNLHLQLTIHRR 502
+ +Q + P KP+K+E + Q+ LH L + R+
Sbjct: 82 KAIQHRDLIGPRKPVKVEPETQKSKLHHLLELQRK 116
>AF068713-4|AAC17795.2| 398|Caenorhabditis elegans Hypothetical
protein T24A6.8 protein.
Length = 398
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +2
Query: 137 SVTIFKRNEENRSLALRTTPGGEMSVMQKRQHCYLCDLPPCRGQCCMSFQKQCV 298
+V + + N E + ++ + + V + H Y CD+ C+G C F++ C+
Sbjct: 11 NVWMSENNVEIKLISTKILKPSKCMVCVRPAHGYHCDVATCKG-CKTFFRRMCL 63
>AF016419-3|AAG24048.1| 529|Caenorhabditis elegans Hypothetical
protein F07G11.3 protein.
Length = 529
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 172 ISRTPHYTRRRDVGDAETATLLPLRLAPMPWAMLHEFSEAV 294
IS +Y + +GD A L+ + L P P+ +F E V
Sbjct: 62 ISSAYYYPTSKSLGDNAVALLMSINLMPSPYYAPPDFQEIV 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,813,227
Number of Sequences: 27780
Number of extensions: 307147
Number of successful extensions: 970
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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