Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060155.seq
(692 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P11042 Cluster: Early 39 kDa protein; n=5; Nucleopolyhe... 179 5e-44
UniRef50_Q05121 Cluster: Early 39 kDa protein; n=7; Nucleopolyhe... 118 1e-25
UniRef50_Q80LT3 Cluster: 39K protein; n=1; Adoxophyes honmai NPV... 93 6e-18
UniRef50_Q91BX9 Cluster: 39K Protein; n=4; Nucleopolyhedrovirus|... 91 2e-17
UniRef50_Q4KT52 Cluster: 39K/pp31; n=2; Nucleopolyhedrovirus|Rep... 91 3e-17
UniRef50_Q0N475 Cluster: 39K/PP31; n=1; Clanis bilineata nucleop... 88 2e-16
UniRef50_A0EYS7 Cluster: 39K; n=1; Ecotropis obliqua NPV|Rep: 39... 86 7e-16
UniRef50_P21288 Cluster: Late expression factor 11; n=6; Nucleop... 86 9e-16
UniRef50_Q9J817 Cluster: ORF120 39K / pp31; n=3; Nucleopolyhedro... 84 4e-15
UniRef50_Q8QL84 Cluster: 39k/pp31; n=2; Nucleopolyhedrovirus|Rep... 81 2e-14
UniRef50_O55584 Cluster: 39K; n=2; Leucania separata nuclear pol... 81 3e-14
UniRef50_Q9IK80 Cluster: 39k protein; n=1; Spodoptera litura NPV... 77 5e-13
UniRef50_Q9YMT0 Cluster: Ld-39K/pp31; n=1; Lymantria dispar MNPV... 69 1e-10
UniRef50_Q9PYY8 Cluster: ORF55; n=2; Granulovirus|Rep: ORF55 - X... 40 0.044
UniRef50_Q91GM8 Cluster: Late expression factor 11; n=5; Nucleop... 40 0.058
UniRef50_Q7TLW3 Cluster: Late expression factor 11; n=1; Chorist... 39 0.10
UniRef50_A2DYN8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.23
UniRef50_Q9JPC7 Cluster: Hypothetical membrane protein; n=1; Rub... 38 0.31
UniRef50_Q7REA2 Cluster: Putative uncharacterized protein PY0516... 35 1.6
UniRef50_Q24GN9 Cluster: Cyclic nucleotide-binding domain contai... 35 1.6
UniRef50_A0E7M0 Cluster: Chromosome undetermined scaffold_81, wh... 35 2.2
UniRef50_Q8I5B0 Cluster: Putative uncharacterized protein; n=2; ... 34 2.9
UniRef50_Q9DVY7 Cluster: PxORF45 peptide; n=1; Plutella xylostel... 34 3.8
UniRef50_Q8KUD0 Cluster: EF0012; n=1; Enterococcus faecalis|Rep:... 33 5.0
UniRef50_A5TTL1 Cluster: Recombination protein J; n=4; Fusobacte... 33 5.0
UniRef50_Q6KIG7 Cluster: Ribonuclease; n=1; Mycoplasma mobile|Re... 33 6.6
UniRef50_A1IAP2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_Q8IIV9 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_Q4Y1A1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_Q890W4 Cluster: Rubredoxin; n=1; Clostridium tetani|Rep... 33 8.8
UniRef50_Q2S0A6 Cluster: TrkH potassium uptake protein; n=1; Sal... 33 8.8
UniRef50_Q7N2H1 Cluster: Succinylglutamate desuccinylase; n=1; P... 33 8.8
>UniRef50_P11042 Cluster: Early 39 kDa protein; n=5;
Nucleopolyhedrovirus|Rep: Early 39 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 275
Score = 179 bits (436), Expect = 5e-44
Identities = 85/106 (80%), Positives = 90/106 (84%)
Frame = +2
Query: 254 FLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDL 433
FLE+KNINYILNV+PVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDL
Sbjct: 44 FLERKNINYILNVVPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDL 103
Query: 434 VKNTPELADFVFIFDHTEKMGXKMATDRHRRLQATTQQFQRAKKXR 571
VKN PELADFVFIFDHTEK+G KMA DR ++ A K R
Sbjct: 104 VKNKPELADFVFIFDHTEKLGKKMA-DRSTSSSSSENAAIPASKKR 148
Score = 85.0 bits (201), Expect = 2e-15
Identities = 61/187 (32%), Positives = 84/187 (44%)
Frame = +3
Query: 123 MVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNSWKKRTLTISST*CLS 302
MVN+PEQQS ETAAVCKNEKLLNKLESSSYNKSNMDQL IVN +++ +
Sbjct: 1 MVNVPEQQSP-ETAAVCKNEKLLNKLESSSYNKSNMDQLAVIVNFLERKNINYILNVVPV 59
Query: 303 CRTNAKCPNARRR*LTTINTFCLTVGTLRSSSPSGLVARPCGIW*KTRPNWQILCSFLIT 482
+ K +++ + + P + K +P
Sbjct: 60 MQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVKNKPELADFVFIFDH 119
Query: 483 LKRWGKKWPPIDIVVFKRQRSNSSEPKKXDLRVXXHAXFGGXKESFEIRD*LXSEFTACX 662
++ GKK + + KK V +A KES E+RD L SEF +
Sbjct: 120 TEKLGKKMADRSTSSSSSENAAIPASKKRQTVVLTNANLAELKESCEMRDKLYSEFYSLL 179
Query: 663 TGPFHYH 683
F+++
Sbjct: 180 NETFNHN 186
>UniRef50_Q05121 Cluster: Early 39 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Early 39 kDa protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 261
Score = 118 bits (285), Expect = 1e-25
Identities = 54/97 (55%), Positives = 70/97 (72%)
Frame = +2
Query: 254 FLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDL 433
F EKK++NY + +P DERK SKR K+V N+N YILFNS+YTKI++PEWP+SP MWD
Sbjct: 43 FFEKKSVNYTVVALPCSGDERKASKRPKRVNNHNMYILFNSFYTKIRRPEWPNSPTMWDT 102
Query: 434 VKNTPELADFVFIFDHTEKMGXKMATDRHRRLQATTQ 544
VK EL+DFV +FDHT+K+G K T R + T+
Sbjct: 103 VKAHKELSDFVRVFDHTQKLG-KSITSRSASSSSFTE 138
>UniRef50_Q80LT3 Cluster: 39K protein; n=1; Adoxophyes honmai
NPV|Rep: 39K protein - Adoxophyes honmai
nucleopolyhedrovirus
Length = 261
Score = 93.1 bits (221), Expect = 6e-18
Identities = 42/79 (53%), Positives = 57/79 (72%)
Frame = +2
Query: 260 EKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVK 439
EKK + Y+L P+ D++K +KR KK I+NNKYILFNSWY KIK+ +PSS MW+L+K
Sbjct: 34 EKKKVPYVLLTSPLYTDDKKSAKRAKKPISNNKYILFNSWYHKIKEDHYPSSSQMWNLMK 93
Query: 440 NTPELADFVFIFDHTEKMG 496
N + +FV +FD EK+G
Sbjct: 94 N--KSTEFVNLFDFVEKVG 110
>UniRef50_Q91BX9 Cluster: 39K Protein; n=4;
Nucleopolyhedrovirus|Rep: 39K Protein - Helicoverpa
armigera NPV
Length = 312
Score = 91.1 bits (216), Expect = 2e-17
Identities = 40/79 (50%), Positives = 59/79 (74%)
Frame = +2
Query: 260 EKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVK 439
EK+ I Y ++VMP + D++K+SK+ KK+ +NNKYILFN++ +KIKQ WPSS +W+LVK
Sbjct: 34 EKQKIGYQVHVMPTIADDKKLSKKIKKITSNNKYILFNTFISKIKQSGWPSSSHLWNLVK 93
Query: 440 NTPELADFVFIFDHTEKMG 496
+ F+ IFD+ EK+G
Sbjct: 94 VHNQSDAFLHIFDYMEKIG 112
Score = 32.7 bits (71), Expect = 8.8
Identities = 12/32 (37%), Positives = 25/32 (78%)
Frame = +3
Query: 180 EKLLNKLESSSYNKSNMDQLIAIVNSWKKRTL 275
E L+ KLE+S YNK++++ L+ ++N ++K+ +
Sbjct: 7 ESLIIKLENSVYNKTHIETLVNVINLFEKQKI 38
>UniRef50_Q4KT52 Cluster: 39K/pp31; n=2; Nucleopolyhedrovirus|Rep:
39K/pp31 - Chrysodeixis chalcites nucleopolyhedrovirus
Length = 317
Score = 90.6 bits (215), Expect = 3e-17
Identities = 45/105 (42%), Positives = 63/105 (60%), Gaps = 13/105 (12%)
Frame = +2
Query: 239 NCYCKFLEKKNINYILNVMPVMQD-------------ERKMSKRKKKVINNNKYILFNSW 379
N + LEKK I Y + +MPV D +++ +K+ KK+I+NNKYILFNSW
Sbjct: 33 NTTIQLLEKKKIKYRITMMPVYGDNGLEFTVAIILLHDKRTAKKTKKMISNNKYILFNSW 92
Query: 380 YTKIKQPEWPSSPAMWDLVKNTPELADFVFIFDHTEKMGXKMATD 514
YTK KQ WP+S MW+++K+ + FV IFD EK+G + D
Sbjct: 93 YTKNKQSVWPNSHMMWNIMKSHSNIKPFVLIFDFMEKLGKSIEVD 137
>UniRef50_Q0N475 Cluster: 39K/PP31; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: 39K/PP31 - Clanis
bilineata nucleopolyhedrosis virus
Length = 281
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/98 (42%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = +2
Query: 251 KFLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWD 430
K EKK + Y V V ++K K+ KK+INNNKYILFNSWYTKI++ W +S MW+
Sbjct: 33 KLFEKKKVAYRFKVSEVFNMDKKSVKKVKKIINNNKYILFNSWYTKIRKSNWLNSHDMWN 92
Query: 431 LVKNTPELADFVFIFDHTEKMGXK-MATDRHRRLQATT 541
L+K++ FV IFD EK+ + + +H + T+
Sbjct: 93 LMKDSLLAKPFVDIFDFMEKLASNTVVSKKHSSVDETS 130
>UniRef50_A0EYS7 Cluster: 39K; n=1; Ecotropis obliqua NPV|Rep: 39K -
Ecotropis obliqua NPV
Length = 293
Score = 86.2 bits (204), Expect = 7e-16
Identities = 38/81 (46%), Positives = 52/81 (64%)
Frame = +2
Query: 251 KFLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWD 430
K EKK + Y + V + +RK+ KR KK+I NNKYILFNSWYTK ++ W SS MW+
Sbjct: 33 KLFEKKKMTYNITVNEIHNYDRKIVKRGKKMITNNKYILFNSWYTKNRKSHWLSSHDMWN 92
Query: 431 LVKNTPELADFVFIFDHTEKM 493
+KN F+ +FD+ EK+
Sbjct: 93 YMKNNAACKTFISLFDYIEKL 113
>UniRef50_P21288 Cluster: Late expression factor 11; n=6;
Nucleopolyhedrovirus|Rep: Late expression factor 11 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 112
Score = 85.8 bits (203), Expect = 9e-16
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = +1
Query: 10 SKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQTW 126
SKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYK QTW
Sbjct: 74 SKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKKQTW 112
>UniRef50_Q9J817 Cluster: ORF120 39K / pp31; n=3;
Nucleopolyhedrovirus|Rep: ORF120 39K / pp31 - Spodoptera
exigua MNPV
Length = 317
Score = 83.8 bits (198), Expect = 4e-15
Identities = 45/98 (45%), Positives = 57/98 (58%), Gaps = 13/98 (13%)
Frame = +2
Query: 257 LEKKNINYILNVMP-------------VMQDERKMSKRKKKVINNNKYILFNSWYTKIKQ 397
LEKK I Y + MP V+ ++K +KR KK I+NNKYILFNSWYTK +
Sbjct: 40 LEKKKIKYKIIPMPMCGEDGLEITFAIVIMVDKKNAKRNKKSISNNKYILFNSWYTKNRN 99
Query: 398 PEWPSSPAMWDLVKNTPELADFVFIFDHTEKMGXKMAT 511
P WP+S MW+L+K FV IFD EK+G + T
Sbjct: 100 PSWPNSHTMWNLIKTQFLAKPFVDIFDFMEKIGKSITT 137
>UniRef50_Q8QL84 Cluster: 39k/pp31; n=2; Nucleopolyhedrovirus|Rep:
39k/pp31 - Mamestra configurata NPV-A
Length = 287
Score = 81.4 bits (192), Expect = 2e-14
Identities = 33/70 (47%), Positives = 50/70 (71%)
Frame = +2
Query: 299 VMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVKNTPELADFVFIFD 478
+ +++K +++ KK+I+ NKYILFNSWYTK +Q WP+S MW+++K+ P FV IFD
Sbjct: 62 IFNNDKKNARKNKKMISYNKYILFNSWYTKNRQETWPNSHTMWNIMKSQPVAKPFVDIFD 121
Query: 479 HTEKMGXKMA 508
EK+G +A
Sbjct: 122 FMEKLGKTIA 131
>UniRef50_O55584 Cluster: 39K; n=2; Leucania separata nuclear
polyhedrosis virus|Rep: 39K - Leucania separata nuclear
polyhedrosis virus (LsNPV)
Length = 324
Score = 80.6 bits (190), Expect = 3e-14
Identities = 38/89 (42%), Positives = 61/89 (68%), Gaps = 4/89 (4%)
Frame = +2
Query: 260 EKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVK 439
EK I Y ++ P+ QD++K +K+ KK+ ++NKYILFN++ +KIKQP WP+S ++W+ K
Sbjct: 33 EKSKIPYHASINPMPQDDKKTNKKPKKITSSNKYILFNTFVSKIKQPGWPNSYSLWNSTK 92
Query: 440 NTPELADFVFIFDH----TEKMGXKMATD 514
P A F+ IF++ T+++ K ATD
Sbjct: 93 ADPTNATFLKIFNYIETITKQIVVKHATD 121
>UniRef50_Q9IK80 Cluster: 39k protein; n=1; Spodoptera litura
NPV|Rep: 39k protein - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 322
Score = 76.6 bits (180), Expect = 5e-13
Identities = 37/101 (36%), Positives = 58/101 (57%)
Frame = +2
Query: 260 EKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVK 439
EK + Y + V + DE+K ++ KK+I++NKYILFN++ +KIKQP WPSS +W+ K
Sbjct: 62 EKMKVPYYIGVTALPCDEKKTHRKPKKIISSNKYILFNTFVSKIKQPGWPSSYRLWNDTK 121
Query: 440 NTPELADFVFIFDHTEKMGXKMATDRHRRLQATTQQFQRAK 562
+ F+ +F+H E + K+ + QQ Q K
Sbjct: 122 SDSRNDKFLQMFNHVEDLIKKIVITKSVNGDGEPQQNQSKK 162
>UniRef50_Q9YMT0 Cluster: Ld-39K/pp31; n=1; Lymantria dispar
MNPV|Rep: Ld-39K/pp31 - Lymantria dispar multicapsid
nuclear polyhedrosis virus (LdMNPV)
Length = 264
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +2
Query: 242 CYCKFLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWY--TKIKQPEWPSS 415
C + EKK I+Y + V V ++K KR KK +NNKYILFNSWY K ++ SS
Sbjct: 33 CKIRLFEKKKISYRIKVSEVYGPDKKTVKRGKKNNHNNKYILFNSWYNSNKERRDNALSS 92
Query: 416 PAMWDLVKNTPELADFVFIFDHTEKMG 496
MW+ +K+ A + +FD+ EK+G
Sbjct: 93 HDMWNHIKSHSSAALVIGLFDYMEKLG 119
>UniRef50_Q9PYY8 Cluster: ORF55; n=2; Granulovirus|Rep: ORF55 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 295
Score = 40.3 bits (90), Expect = 0.044
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +2
Query: 314 RKMSKRKKKVI--NNNKYILFNSWYTKIKQPEWPSSPAMWDLVKNTPE 451
+K S +KKK + +NNKYILF +++K EW SS MW L+ P+
Sbjct: 79 KKSSLKKKKPLLYSNNKYILFTQLISRLKL-EWKSSNKMWSLMGVNPD 125
>UniRef50_Q91GM8 Cluster: Late expression factor 11; n=5;
Nucleopolyhedrovirus|Rep: Late expression factor 11 -
Epiphyas postvittana nucleopolyhedrovirus (EppoMNPV)
Length = 126
Score = 39.9 bits (89), Expect = 0.058
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +1
Query: 10 SKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQTW 126
SKRKVC H KRIAR L ++K EY V+ VY W
Sbjct: 88 SKRKVCHHDKRIARTLHLEKNLVDEYACSVTHVYSAPKW 126
>UniRef50_Q7TLW3 Cluster: Late expression factor 11; n=1;
Choristoneura fumiferana MNPV|Rep: Late expression
factor 11 - Choristoneura fumiferana nuclear
polyhedrosis virus (CfMNPV)
Length = 107
Score = 39.1 bits (87), Expect = 0.10
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +1
Query: 10 SKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQTW 126
SKRKVC HH+RI R L + EY V+ VY++ W
Sbjct: 69 SKRKVCNHHRRIKRTLELNLNLVNEYACSVTDVYRSPKW 107
>UniRef50_A2DYN8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 391
Score = 37.9 bits (84), Expect = 0.23
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = +3
Query: 66 KNISSRIQAGRFKGLQK-SNMVNMPEQQSSTETAAVCKNEKLLNKLESS--SYNKSNMDQ 236
+NIS+ R+K L K N+P ++ ET + KN KLL K ES+ Y+K+ M++
Sbjct: 255 RNISN--SENRYKVLSKLPKNNNLPNEEIEMETDQLIKNLKLLQKRESNRIKYSKAEMEE 312
Query: 237 LIAIVNSWKKR 269
L ++ +K+
Sbjct: 313 LTELIQKSEKK 323
>UniRef50_Q9JPC7 Cluster: Hypothetical membrane protein; n=1;
Rubrivivax gelatinosus|Rep: Hypothetical membrane
protein - Rhodocyclus gelatinosus (Rhodopseudomonas
gelatinosa)
Length = 408
Score = 37.5 bits (83), Expect = 0.31
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = -2
Query: 445 RVFHQIPH-GRATRPLGLLDLSVPTVKQNVFIVVNHLLLAFGHFAFVLHDRHYVEDIVNV 269
R++H +P GR PL +L +V ++V +LLL G A+VLH R E+ V
Sbjct: 121 RIWHMLPVVGRFNWPLSML-------AWDVVVLVGYLLLNLGLPAYVLHARWRGEEPVTA 173
Query: 268 LFFQEFTIAISWSM 227
+F +AI W++
Sbjct: 174 RYFPVVIVAIFWAV 187
>UniRef50_Q7REA2 Cluster: Putative uncharacterized protein PY05163;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY05163 - Plasmodium yoelii
yoelii
Length = 301
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Frame = +2
Query: 266 KNINYILNVMPVMQ-DERKMSKRKKKVINNN----KYILFNSWY 382
KN+N+ N + ++ D+ K S + KK NNN YILFN +Y
Sbjct: 14 KNVNFFKNALALLNVDDNKNSMKSKKSTNNNVELDNYILFNLFY 57
>UniRef50_Q24GN9 Cluster: Cyclic nucleotide-binding domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Cyclic
nucleotide-binding domain containing protein -
Tetrahymena thermophila SB210
Length = 1504
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 251 KFLEKKNINYILNVMPVMQ-DERKMSKRKKKVINNNKYILFNSWYT 385
KF NI +LN + +MQ ++RKM K+K+ + ILF+ +YT
Sbjct: 1410 KFFPHNNIESVLNKLKIMQLEQRKMKKQKQINKPRRQNILFSRFYT 1455
>UniRef50_A0E7M0 Cluster: Chromosome undetermined scaffold_81, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_81,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1600
Score = 34.7 bits (76), Expect = 2.2
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 335 KKVINNNKYILFNSWYTKIKQPEWPSSPAMWDLVKNTPELADFVF 469
KK+INN KY LFN Y +K+ ++P + A+ + +L F F
Sbjct: 9 KKLINNTKYKLFNVVYLILKRQQYPLNVAIISTIIQMAQLLYFSF 53
>UniRef50_Q8I5B0 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 988
Score = 34.3 bits (75), Expect = 2.9
Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Frame = +2
Query: 257 LEKKNINYIL---NVMPVMQDERKMSKRKKKV-INNNKYILFN 373
+E KN+N ++ N+ V+ +E+K KRK+K+ I+ NK+IL N
Sbjct: 375 VEAKNMNNLVIEQNIEKVIVEEKKKRKRKEKINIDENKHILIN 417
>UniRef50_Q9DVY7 Cluster: PxORF45 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF45 peptide - Plutella xylostella
granulovirus
Length = 252
Score = 33.9 bits (74), Expect = 3.8
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 257 LEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEWPSSPAMW 427
L+KK + + + V + + K+ + +NN YILF ++K+K W +S MW
Sbjct: 43 LKKKMFDIKMKLEMVPIKKSNLKKKLPSLYSNNTYILFTQLFSKLKL-TWKASNKMW 98
>UniRef50_Q8KUD0 Cluster: EF0012; n=1; Enterococcus faecalis|Rep:
EF0012 - Enterococcus faecalis (Streptococcus faecalis)
Length = 653
Score = 33.5 bits (73), Expect = 5.0
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +2
Query: 254 FLEKKNINYILNVMPVMQDE----RKMSKRKKKVINNNKYILFNSWYTKIKQP--EW 406
++E K I Y++N P + + + SK +KK +N + + YTKI P EW
Sbjct: 468 YMESKRIQYLVNFPPFLPNRIWKNQNPSKGRKKTLNKYTALKVGNLYTKINNPVAEW 524
>UniRef50_A5TTL1 Cluster: Recombination protein J; n=4;
Fusobacterium nucleatum|Rep: Recombination protein J -
Fusobacterium nucleatum subsp. polymorphum ATCC 10953
Length = 844
Score = 33.5 bits (73), Expect = 5.0
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 251 KFLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQPEW 406
K+L+ I + +++P++ D RK KR + + N+K+I KI W
Sbjct: 211 KYLDIVAIGTVADIVPLISDNRKFVKRGLETLRNSKWIGIKQLLRKIFPDNW 262
>UniRef50_Q6KIG7 Cluster: Ribonuclease; n=1; Mycoplasma mobile|Rep:
Ribonuclease - Mycoplasma mobile
Length = 227
Score = 33.1 bits (72), Expect = 6.6
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 254 FLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFN 373
FLE+K+ N ++ DE+ + K +K++NN K++L N
Sbjct: 100 FLEQKHQNIDYVIIDAFSDEKNIDKYIEKLVNNKKFMLQN 139
>UniRef50_A1IAP2 Cluster: Putative uncharacterized protein; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative
uncharacterized protein - Candidatus Desulfococcus
oleovorans Hxd3
Length = 544
Score = 33.1 bits (72), Expect = 6.6
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 356 KYILFNSWYTKIKQPEWP-SSPAMWDLVKNTPELADFVFIFDHTEKMGXKMA 508
K +L N+ +++QP+ P ++ WDL TP+ +D F+ K+G ++A
Sbjct: 57 KTVLMNNLAERMRQPDSPYNAVVFWDLGHQTPD-SDHAFLKSFCHKLGQELA 107
>UniRef50_Q8IIV9 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1081
Score = 33.1 bits (72), Expect = 6.6
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Frame = +2
Query: 239 NCYCKFLEKKNINYILNVMPV---MQDERKMSKRKKKVINNNKYILFN 373
N +C+ LE +IN +L+ P +++ K KRKKK++NNN I++N
Sbjct: 703 NFFCE-LEVDDINTLLSKYPFNEKVKENSKNKKRKKKILNNN--IIYN 747
>UniRef50_Q4Y1A1 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 69
Score = 33.1 bits (72), Expect = 6.6
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +2
Query: 254 FLEKKNINYILNVMPVMQDE--RKMSKRKKKVINN-NKYILF-NSWYTKIK 394
F K INY+LN + + ++M ++K+K+ NN N YI F + Y K+K
Sbjct: 9 FFILKQINYLLNFSNITTKKVCKQMFEKKRKIFNNTNSYIFFIYNLYKKVK 59
>UniRef50_Q890W4 Cluster: Rubredoxin; n=1; Clostridium tetani|Rep:
Rubredoxin - Clostridium tetani
Length = 433
Score = 32.7 bits (71), Expect = 8.8
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Frame = +2
Query: 233 PANCYCK---FLEKKNINYILN--VMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIKQ 397
P+N Y + E+KNIN ILN V + ++K+ K +N +K IL N Y I
Sbjct: 102 PSNFYLSKENWFEEKNINLILNTAVNNINPVDKKVLLSNGKTLNYDKLILANGGYNFIPP 161
Query: 398 PEWPSSPAMWDL--VKNTPELADFVFIFDHTEKMG 496
E ++ L ++++ + D+ H +G
Sbjct: 162 IEGKDKKGVFTLRGLEDSENIKDYAKKIKHATVIG 196
>UniRef50_Q2S0A6 Cluster: TrkH potassium uptake protein; n=1;
Salinibacter ruber DSM 13855|Rep: TrkH potassium uptake
protein - Salinibacter ruber (strain DSM 13855)
Length = 499
Score = 32.7 bits (71), Expect = 8.8
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 448 GRVFHQIPHGRATRP--LGLLDLSVPTVKQNVFIVVNHLLLAFGHFAFVLHDRHYV 287
GR Q+ H + RP LG + P V+ + +++ +LLL G F+ D H V
Sbjct: 375 GRELFQMIHPSSVRPMWLGRRTVKEPVVRGILIVILTYLLLVVGGTGFIAVDAHRV 430
>UniRef50_Q7N2H1 Cluster: Succinylglutamate desuccinylase; n=1;
Photorhabdus luminescens subsp. laumondii|Rep:
Succinylglutamate desuccinylase - Photorhabdus
luminescens subsp. laumondii
Length = 325
Score = 32.7 bits (71), Expect = 8.8
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = -2
Query: 424 HGRATRPLGLLDLSVPTVKQNVFIVVNHLLLAFGHFAFVLHDRHYVEDIVNVLF 263
HG T P+ +L + + + + N++L+ FG+ + +R Y+ D +N +F
Sbjct: 51 HGNETAPIEILIQLLAQLAEGTLALKNNVLIIFGNLPAMRTNRRYLHDDLNRMF 104
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,032,398
Number of Sequences: 1657284
Number of extensions: 13248168
Number of successful extensions: 37871
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 36140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37829
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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