Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060155.seq
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           26   1.3  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     26   1.3  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    26   1.3  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          25   1.7  
AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    24   5.2  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   9.1  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    23   9.1  

>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 90  AGRFKGLQKSNMVNMPEQQSSTETAAVCKNE 182
           A   K +   ++ N P+QQS+T     C+N+
Sbjct: 118 AAELKNMVLQDISNQPKQQSTTRPLRKCRNK 148


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 90  AGRFKGLQKSNMVNMPEQQSSTETAAVCKNE 182
           A   K +   ++ N P+QQS+T     C+N+
Sbjct: 119 AAELKNMVLQDISNQPKQQSTTRPLRKCRNK 149


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
 Frame = -2

Query: 430 IPHGRATRPLGLLDLSVPTVKQNVFIVV---NHLLLAFG-----HFAFVLHDRHYVEDIV 275
           IP+ R  RP+ L ++++P  +Q  F      +HLLL  G      F   L   ++ +D V
Sbjct: 556 IPYERTFRPMALSNINLPETEQFRFCNCGWPHHLLLPKGTAEGMKFDLFLMISNFADDTV 615

Query: 274 NVLFFQE 254
           N  F ++
Sbjct: 616 NQEFNED 622


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = -1

Query: 578 PQVGLFWLAGIAALSLEDDDVDRWPFFXPSFQCDQK*TQNLPIRACFSPN 429
           P V + W+ G++  +L  DD     F      C     QN+     F+P+
Sbjct: 111 PFVPISWIQGLSHRNLPGDDYTECSFIFLYILCTMSIRQNIQKMLGFAPS 160


>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 400 GLLDLSVPTVKQNVFIVVNHLLLAFGHFAFVLHDRHYVED 281
           G + +S P+  + VFI +N + L  G   F +H++  + D
Sbjct: 35  GNVTISQPSCTEPVFIDINVVGLTPGKHGFHIHEKGDLTD 74


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = +2

Query: 239 NCYCKFLEKKNINYILNVMPVMQDERKMSKRKKK 340
           NC  K    K +  I  +  ++Q+E++ +KR+++
Sbjct: 131 NCAMKEQNAKLLEQITGMCQLLQEEKEEAKRREE 164


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -2

Query: 127 TMFDFCKPLKRPACILDDIFF*CPTAWQFVCD 32
           TM DF      P C+LD I +     W   C+
Sbjct: 150 TMVDFKLLQVIPYCVLDTITYMMGGYWYMACE 181


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,271
Number of Sequences: 2352
Number of extensions: 14926
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)