BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV060154.seq (527 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_01_0437 + 3471154-3471447,3471664-3471858,3472619-3472741,347... 48 5e-06 12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 31 0.43 07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 30 1.0 05_01_0074 + 506803-507963 30 1.0 05_03_0468 + 14376926-14377183,14377534-14377710,14377802-143778... 29 2.3 08_02_0879 + 22183052-22183340,22183802-22183949,22184017-22184044 29 3.1 11_01_0600 - 4780579-4780839,4781256-4781324,4781535-4781598,478... 28 4.0 04_01_0576 + 7466032-7466802,7468382-7468444,7469043-7469122,746... 28 4.0 12_02_1063 - 25769821-25770365,25770513-25771010,25771394-25771406 28 5.3 01_06_0499 + 29823578-29823754,29823882-29824002,29825103-298252... 28 5.3 10_08_0943 + 21728294-21728675,21728767-21728840,21729469-217304... 27 7.1 06_01_1183 + 10157813-10159909 27 7.1 06_01_0389 + 2779790-2779891,2780378-2781912,2782087-2782135,278... 27 7.1 02_04_0109 + 19812544-19814474,19814574-19814607 27 7.1 02_01_0507 - 3682383-3682703,3682830-3682970,3683071-3683147,368... 27 7.1 11_03_0078 - 9662677-9663642,9666589-9666747 27 9.3 10_01_0129 + 1535823-1537196 27 9.3 04_04_1032 - 30259180-30260519,30260650-30260720,30261099-302621... 27 9.3 01_01_1100 + 8716853-8716860,8717739-8717844,8717931-8718015,871... 27 9.3 >05_01_0437 + 3471154-3471447,3471664-3471858,3472619-3472741, 3473245-3473430,3473633-3473766,3473866-3474052, 3474179-3474280 Length = 406 Score = 48.0 bits (109), Expect = 5e-06 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +1 Query: 256 VEKLTTMKRKASEAIN-EELQVAYVCXKRLEHLKEQASALAXPSSTQVKTTLNQWRKVRL 432 V +L +KRK E EELQV C RL L ASA + + +W ++RL Sbjct: 89 VSRLHGLKRKMEEGARAEELQVQR-CRARLNRL---ASASSGDDA--------EWEELRL 136 Query: 433 DRMLVDYFLRXGYYEXAWKLAESAG 507 R+LVDY LR YY+ A LAE++G Sbjct: 137 KRILVDYMLRMSYYDTAANLAETSG 161 >12_02_0030 + 12469707-12469902,12470337-12470658,12472208-12472245, 12472486-12473573 Length = 547 Score = 31.5 bits (68), Expect = 0.43 Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Frame = +3 Query: 192 KWKRSRTNPSQIQRSIVYWVAGREVDNDEAKSERGY*RGAPGR---LRLXEASGTPEGAG 362 KWK T S R I WV R +DEA+ ER GA GR +R E G+ G Sbjct: 47 KWKVHTTKRSSGTRRIS-WVGERRQRSDEARPERRRQEGAGGRGAGVRRVEGGGS-GAVG 104 Query: 363 QRPRRXVL 386 + R VL Sbjct: 105 EGARAAVL 112 >07_03_1647 + 28370226-28370369,28370452-28370611,28370704-28370831, 28372512-28372628,28372729-28372782,28372985-28373075, 28373517-28373688,28374452-28374573,28374726-28374817, 28375331-28375373,28375596-28375656,28376367-28376515, 28376659-28376729,28376805-28376975,28377056-28377124, 28377427-28377528,28377629-28377697,28378060-28378138, 28378238-28378337,28378438-28378513,28378715-28378894, 28379430-28379552,28379634-28379717,28380068-28380252, 28380339-28380477,28380585-28380644,28380926-28381030, 28381332-28381445 Length = 1019 Score = 30.3 bits (65), Expect = 1.0 Identities = 20/56 (35%), Positives = 29/56 (51%) Frame = -2 Query: 502 RTPPASKRTRSNRSSGSSQPASDRDALYAIGSASSSPAWRTXRRGRWPAPSGVPDA 335 R A+KR S+ + S PA+D A A + SS+P R+ +R + A G P A Sbjct: 5 RRSAAAKRRASSEEAAS--PATDGAAAGAGAAGSSTPRRRSGKRAKAEATVGTPAA 58 >05_01_0074 + 506803-507963 Length = 386 Score = 30.3 bits (65), Expect = 1.0 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 4/39 (10%) Frame = -2 Query: 487 SKRTRSNRSSGSSQP----ASDRDALYAIGSASSSPAWR 383 S + S SS S+P ASDR A+++ GS S S +WR Sbjct: 336 SHSSNSQASSSHSRPELNDASDRSAVFSHGSRSRSTSWR 374 >05_03_0468 + 14376926-14377183,14377534-14377710,14377802-14377867, 14378009-14378134,14378499-14378678,14379015-14379179, 14380185-14380538 Length = 441 Score = 29.1 bits (62), Expect = 2.3 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = -2 Query: 514 SLGRRTPPA-SKRTRSNRSSGSSQPASDRDALYAIGSASSSPAWRTXRRG 368 S+G +PP S ++ R+S + + AS + Y+ SAS++ A RRG Sbjct: 26 SVGPSSPPQDSLAAQAMRASAAHRDASSLSSAYSSSSASAAAAAAAARRG 75 >08_02_0879 + 22183052-22183340,22183802-22183949,22184017-22184044 Length = 154 Score = 28.7 bits (61), Expect = 3.1 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -2 Query: 463 SSGSSQPASDRDALYAIGSASSSPAWRTXRRGRWPAPSGVPDAS 332 SS S PAS D+ +A + +WR RR A P+A+ Sbjct: 80 SSVPSSPASAPDSPFASATTPKGDSWRRLRRKPKTATDAAPEAA 123 >11_01_0600 - 4780579-4780839,4781256-4781324,4781535-4781598, 4781791-4781919,4782234-4782541 Length = 276 Score = 28.3 bits (60), Expect = 4.0 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = -2 Query: 505 RRTPPASKRTRSNRSSGSSQPASDRDALYAIGSASSSPAWRTXRRGRWPA-PSG 347 RR P R S ++ S+ PAS AL G A S R RW + P+G Sbjct: 215 RRRQPRPSRRSSAAAAASAPPASASSALLPWGPALSHLREVDWERSRWDSIPTG 268 >04_01_0576 + 7466032-7466802,7468382-7468444,7469043-7469122, 7469505-7469622,7470035-7470067,7470400-7470474, 7470887-7471043,7471142-7471230,7472041-7472294, 7472977-7473148,7473250-7473333,7473626-7473730, 7474055-7474363,7474622-7474756,7476236-7476317, 7476423-7476502,7476622-7476783,7477071-7477138, 7478422-7478502,7478634-7478760,7478816-7478879, 7480808-7480854,7481042-7481335 Length = 1149 Score = 28.3 bits (60), Expect = 4.0 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Frame = -2 Query: 502 RTPPASKRTRSNRSSGSSQPASDRDALYAI------GSASSSPAWRTXRRGRWPAPSGVP 341 RT AS T S S S+ P ++ A+ ++SSS W T WP P+ +P Sbjct: 8 RTTSASSSTLSTDSPNSAPPGGVPQSITALLNNPLPSASSSSYYWLT-----WPPPTPLP 62 Query: 340 DA 335 DA Sbjct: 63 DA 64 >12_02_1063 - 25769821-25770365,25770513-25771010,25771394-25771406 Length = 351 Score = 27.9 bits (59), Expect = 5.3 Identities = 20/61 (32%), Positives = 24/61 (39%) Frame = -2 Query: 517 SSLGRRTPPASKRTRSNRSSGSSQPASDRDALYAIGSASSSPAWRTXRRGRWPAPSGVPD 338 S+ R PPA +N S+ PAS R A + ASS R W A S Sbjct: 112 SASARSPPPARPPPATNTSAEERFPASPRAARKDLSEASSGA--EEERSAAWEASSSTSQ 169 Query: 337 A 335 A Sbjct: 170 A 170 >01_06_0499 + 29823578-29823754,29823882-29824002,29825103-29825227, 29825338-29825432,29825890-29825994,29826103-29826899, 29827100-29827154,29827930-29828035,29828126-29828268, 29828816-29829038 Length = 648 Score = 27.9 bits (59), Expect = 5.3 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 2/55 (3%) Frame = -2 Query: 517 SSLGRRTPPASKRTRSNRSSGSSQPASDRDALYAIGSASSSPAWRTXRRGR--WP 359 S+ R TPPA S +PA+ A ASS P R R+ + WP Sbjct: 8 SASARATPPARSLPPLGASGSQQEPAATASHHAAGAGASSRPMRRKGRKQKQLWP 62 >10_08_0943 + 21728294-21728675,21728767-21728840,21729469-21730443, 21730617-21730683,21730765-21730827,21731001-21731064, 21731162-21731255,21731352-21731435,21731523-21731612, 21731708-21731735,21732117-21732596,21732679-21732740, 21732820-21732929,21733014-21733101,21733228-21733557, 21733782-21733904 Length = 1037 Score = 27.5 bits (58), Expect = 7.1 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -2 Query: 487 SKRTRSNRSSGSSQPASDRDALYAIGSASSS 395 SKR RSNRS S P +D + + I +A S Sbjct: 679 SKRKRSNRSPVGSAPKNDNKSRHGIQAADVS 709 >06_01_1183 + 10157813-10159909 Length = 698 Score = 27.5 bits (58), Expect = 7.1 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -3 Query: 261 LDLPPNRLSISVFVMGWFLTVSISVAA 181 +D PP RL ++V + LTVS S AA Sbjct: 1 MDAPPLRLRLAVAFLSLLLTVSASAAA 27 >06_01_0389 + 2779790-2779891,2780378-2781912,2782087-2782135, 2782620-2782683,2782755-2782843 Length = 612 Score = 27.5 bits (58), Expect = 7.1 Identities = 16/55 (29%), Positives = 23/55 (41%) Frame = -2 Query: 232 LCICDGLVLDRFHFCGGTANLTRLNIEDALSTAVLLVKHFIRHLQCRMLHRFDLI 68 LC L LD CGG +L N +D ++ + R L +H DL+ Sbjct: 205 LCKASWLHLDGVAVCGGLESLYMKNCQDLTDASLAAIGRGCRRLAKFGIHGCDLV 259 >02_04_0109 + 19812544-19814474,19814574-19814607 Length = 654 Score = 27.5 bits (58), Expect = 7.1 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = -2 Query: 502 RTPPAS-KRTRSNRSSGSSQPASDRDALYAIGSASSSPA 389 +TP S KR+RS RS GSS +SDR ++ S S A Sbjct: 368 QTPKESRKRSRSKRSRGSSL-SSDRSTSHSTSKCSRSRA 405 >02_01_0507 - 3682383-3682703,3682830-3682970,3683071-3683147, 3683835-3683901 Length = 201 Score = 27.5 bits (58), Expect = 7.1 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%) Frame = +3 Query: 324 RLXEASGTPEGAGQRP-RRXVLHAGEDD 404 R A+G + QRP RR LHAG+DD Sbjct: 94 RTVPAAGIGSHSHQRPHRRQALHAGDDD 121 >11_03_0078 - 9662677-9663642,9666589-9666747 Length = 374 Score = 27.1 bits (57), Expect = 9.3 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = -2 Query: 523 LVSSLGRRTPPASKRTRSNRSSGSSQPASDRDALYAIGSASSSPA 389 + ++L R P S TRS ++GS + + R ++ +GS+SSS A Sbjct: 9 VAATLHPRPPSDSGGTRS-AAAGSGRDENRRRRIWPVGSSSSSAA 52 >10_01_0129 + 1535823-1537196 Length = 457 Score = 27.1 bits (57), Expect = 9.3 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = -2 Query: 490 ASKRTRSNRSSGSSQPASDRDALYAIGSASSSPAWRTXRRGRWPAPSGVP 341 +S+R R + SS +S P R P R RRG P+PS VP Sbjct: 38 SSRRPRPSGSSPTSSPGQIRSP--PDDGDGQPPPPRRRRRGEPPSPSPVP 85 >04_04_1032 - 30259180-30260519,30260650-30260720,30261099-30262118, 30263886-30264121 Length = 888 Score = 27.1 bits (57), Expect = 9.3 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -2 Query: 409 SASSSPAWRTXRRGRWP 359 S S+SPAWRT RR P Sbjct: 722 STSASPAWRTGRRTAMP 738 >01_01_1100 + 8716853-8716860,8717739-8717844,8717931-8718015, 8718632-8718715,8718969-8719073,8719621-8719898 Length = 221 Score = 27.1 bits (57), Expect = 9.3 Identities = 14/39 (35%), Positives = 24/39 (61%) Frame = -2 Query: 505 RRTPPASKRTRSNRSSGSSQPASDRDALYAIGSASSSPA 389 +++ +SK+TRS +SGS +S A ++G S+ PA Sbjct: 126 KKSAGSSKKTRSRFTSGSKNRSSQGSA-QSLGQQSAEPA 163 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,639,952 Number of Sequences: 37544 Number of extensions: 259085 Number of successful extensions: 1018 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 988 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1017 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1166441080 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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