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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060154.seq
         (527 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0437 + 3471154-3471447,3471664-3471858,3472619-3472741,347...    48   5e-06
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722...    31   0.43 
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708...    30   1.0  
05_01_0074 + 506803-507963                                             30   1.0  
05_03_0468 + 14376926-14377183,14377534-14377710,14377802-143778...    29   2.3  
08_02_0879 + 22183052-22183340,22183802-22183949,22184017-22184044     29   3.1  
11_01_0600 - 4780579-4780839,4781256-4781324,4781535-4781598,478...    28   4.0  
04_01_0576 + 7466032-7466802,7468382-7468444,7469043-7469122,746...    28   4.0  
12_02_1063 - 25769821-25770365,25770513-25771010,25771394-25771406     28   5.3  
01_06_0499 + 29823578-29823754,29823882-29824002,29825103-298252...    28   5.3  
10_08_0943 + 21728294-21728675,21728767-21728840,21729469-217304...    27   7.1  
06_01_1183 + 10157813-10159909                                         27   7.1  
06_01_0389 + 2779790-2779891,2780378-2781912,2782087-2782135,278...    27   7.1  
02_04_0109 + 19812544-19814474,19814574-19814607                       27   7.1  
02_01_0507 - 3682383-3682703,3682830-3682970,3683071-3683147,368...    27   7.1  
11_03_0078 - 9662677-9663642,9666589-9666747                           27   9.3  
10_01_0129 + 1535823-1537196                                           27   9.3  
04_04_1032 - 30259180-30260519,30260650-30260720,30261099-302621...    27   9.3  
01_01_1100 + 8716853-8716860,8717739-8717844,8717931-8718015,871...    27   9.3  

>05_01_0437 +
           3471154-3471447,3471664-3471858,3472619-3472741,
           3473245-3473430,3473633-3473766,3473866-3474052,
           3474179-3474280
          Length = 406

 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = +1

Query: 256 VEKLTTMKRKASEAIN-EELQVAYVCXKRLEHLKEQASALAXPSSTQVKTTLNQWRKVRL 432
           V +L  +KRK  E    EELQV   C  RL  L   ASA +   +        +W ++RL
Sbjct: 89  VSRLHGLKRKMEEGARAEELQVQR-CRARLNRL---ASASSGDDA--------EWEELRL 136

Query: 433 DRMLVDYFLRXGYYEXAWKLAESAG 507
            R+LVDY LR  YY+ A  LAE++G
Sbjct: 137 KRILVDYMLRMSYYDTAANLAETSG 161


>12_02_0030 +
           12469707-12469902,12470337-12470658,12472208-12472245,
           12472486-12473573
          Length = 547

 Score = 31.5 bits (68), Expect = 0.43
 Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = +3

Query: 192 KWKRSRTNPSQIQRSIVYWVAGREVDNDEAKSERGY*RGAPGR---LRLXEASGTPEGAG 362
           KWK   T  S   R I  WV  R   +DEA+ ER    GA GR   +R  E  G+    G
Sbjct: 47  KWKVHTTKRSSGTRRIS-WVGERRQRSDEARPERRRQEGAGGRGAGVRRVEGGGS-GAVG 104

Query: 363 QRPRRXVL 386
           +  R  VL
Sbjct: 105 EGARAAVL 112


>07_03_1647 +
           28370226-28370369,28370452-28370611,28370704-28370831,
           28372512-28372628,28372729-28372782,28372985-28373075,
           28373517-28373688,28374452-28374573,28374726-28374817,
           28375331-28375373,28375596-28375656,28376367-28376515,
           28376659-28376729,28376805-28376975,28377056-28377124,
           28377427-28377528,28377629-28377697,28378060-28378138,
           28378238-28378337,28378438-28378513,28378715-28378894,
           28379430-28379552,28379634-28379717,28380068-28380252,
           28380339-28380477,28380585-28380644,28380926-28381030,
           28381332-28381445
          Length = 1019

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 20/56 (35%), Positives = 29/56 (51%)
 Frame = -2

Query: 502 RTPPASKRTRSNRSSGSSQPASDRDALYAIGSASSSPAWRTXRRGRWPAPSGVPDA 335
           R   A+KR  S+  + S  PA+D  A  A  + SS+P  R+ +R +  A  G P A
Sbjct: 5   RRSAAAKRRASSEEAAS--PATDGAAAGAGAAGSSTPRRRSGKRAKAEATVGTPAA 58


>05_01_0074 + 506803-507963
          Length = 386

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
 Frame = -2

Query: 487 SKRTRSNRSSGSSQP----ASDRDALYAIGSASSSPAWR 383
           S  + S  SS  S+P    ASDR A+++ GS S S +WR
Sbjct: 336 SHSSNSQASSSHSRPELNDASDRSAVFSHGSRSRSTSWR 374


>05_03_0468 +
           14376926-14377183,14377534-14377710,14377802-14377867,
           14378009-14378134,14378499-14378678,14379015-14379179,
           14380185-14380538
          Length = 441

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = -2

Query: 514 SLGRRTPPA-SKRTRSNRSSGSSQPASDRDALYAIGSASSSPAWRTXRRG 368
           S+G  +PP  S   ++ R+S + + AS   + Y+  SAS++ A    RRG
Sbjct: 26  SVGPSSPPQDSLAAQAMRASAAHRDASSLSSAYSSSSASAAAAAAAARRG 75


>08_02_0879 + 22183052-22183340,22183802-22183949,22184017-22184044
          Length = 154

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -2

Query: 463 SSGSSQPASDRDALYAIGSASSSPAWRTXRRGRWPAPSGVPDAS 332
           SS  S PAS  D+ +A  +     +WR  RR    A    P+A+
Sbjct: 80  SSVPSSPASAPDSPFASATTPKGDSWRRLRRKPKTATDAAPEAA 123


>11_01_0600 -
           4780579-4780839,4781256-4781324,4781535-4781598,
           4781791-4781919,4782234-4782541
          Length = 276

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -2

Query: 505 RRTPPASKRTRSNRSSGSSQPASDRDALYAIGSASSSPAWRTXRRGRWPA-PSG 347
           RR  P   R  S  ++ S+ PAS   AL   G A S        R RW + P+G
Sbjct: 215 RRRQPRPSRRSSAAAAASAPPASASSALLPWGPALSHLREVDWERSRWDSIPTG 268


>04_01_0576 +
           7466032-7466802,7468382-7468444,7469043-7469122,
           7469505-7469622,7470035-7470067,7470400-7470474,
           7470887-7471043,7471142-7471230,7472041-7472294,
           7472977-7473148,7473250-7473333,7473626-7473730,
           7474055-7474363,7474622-7474756,7476236-7476317,
           7476423-7476502,7476622-7476783,7477071-7477138,
           7478422-7478502,7478634-7478760,7478816-7478879,
           7480808-7480854,7481042-7481335
          Length = 1149

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
 Frame = -2

Query: 502 RTPPASKRTRSNRSSGSSQPASDRDALYAI------GSASSSPAWRTXRRGRWPAPSGVP 341
           RT  AS  T S  S  S+ P     ++ A+       ++SSS  W T     WP P+ +P
Sbjct: 8   RTTSASSSTLSTDSPNSAPPGGVPQSITALLNNPLPSASSSSYYWLT-----WPPPTPLP 62

Query: 340 DA 335
           DA
Sbjct: 63  DA 64


>12_02_1063 - 25769821-25770365,25770513-25771010,25771394-25771406
          Length = 351

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 20/61 (32%), Positives = 24/61 (39%)
 Frame = -2

Query: 517 SSLGRRTPPASKRTRSNRSSGSSQPASDRDALYAIGSASSSPAWRTXRRGRWPAPSGVPD 338
           S+  R  PPA     +N S+    PAS R A   +  ASS       R   W A S    
Sbjct: 112 SASARSPPPARPPPATNTSAEERFPASPRAARKDLSEASSGA--EEERSAAWEASSSTSQ 169

Query: 337 A 335
           A
Sbjct: 170 A 170


>01_06_0499 +
           29823578-29823754,29823882-29824002,29825103-29825227,
           29825338-29825432,29825890-29825994,29826103-29826899,
           29827100-29827154,29827930-29828035,29828126-29828268,
           29828816-29829038
          Length = 648

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
 Frame = -2

Query: 517 SSLGRRTPPASKRTRSNRSSGSSQPASDRDALYAIGSASSSPAWRTXRRGR--WP 359
           S+  R TPPA        S    +PA+      A   ASS P  R  R+ +  WP
Sbjct: 8   SASARATPPARSLPPLGASGSQQEPAATASHHAAGAGASSRPMRRKGRKQKQLWP 62


>10_08_0943 +
           21728294-21728675,21728767-21728840,21729469-21730443,
           21730617-21730683,21730765-21730827,21731001-21731064,
           21731162-21731255,21731352-21731435,21731523-21731612,
           21731708-21731735,21732117-21732596,21732679-21732740,
           21732820-21732929,21733014-21733101,21733228-21733557,
           21733782-21733904
          Length = 1037

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -2

Query: 487 SKRTRSNRSSGSSQPASDRDALYAIGSASSS 395
           SKR RSNRS   S P +D  + + I +A  S
Sbjct: 679 SKRKRSNRSPVGSAPKNDNKSRHGIQAADVS 709


>06_01_1183 + 10157813-10159909
          Length = 698

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 261 LDLPPNRLSISVFVMGWFLTVSISVAA 181
           +D PP RL ++V  +   LTVS S AA
Sbjct: 1   MDAPPLRLRLAVAFLSLLLTVSASAAA 27


>06_01_0389 +
           2779790-2779891,2780378-2781912,2782087-2782135,
           2782620-2782683,2782755-2782843
          Length = 612

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = -2

Query: 232 LCICDGLVLDRFHFCGGTANLTRLNIEDALSTAVLLVKHFIRHLQCRMLHRFDLI 68
           LC    L LD    CGG  +L   N +D    ++  +    R L    +H  DL+
Sbjct: 205 LCKASWLHLDGVAVCGGLESLYMKNCQDLTDASLAAIGRGCRRLAKFGIHGCDLV 259


>02_04_0109 + 19812544-19814474,19814574-19814607
          Length = 654

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -2

Query: 502 RTPPAS-KRTRSNRSSGSSQPASDRDALYAIGSASSSPA 389
           +TP  S KR+RS RS GSS  +SDR   ++    S S A
Sbjct: 368 QTPKESRKRSRSKRSRGSSL-SSDRSTSHSTSKCSRSRA 405


>02_01_0507 -
           3682383-3682703,3682830-3682970,3683071-3683147,
           3683835-3683901
          Length = 201

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 324 RLXEASGTPEGAGQRP-RRXVLHAGEDD 404
           R   A+G    + QRP RR  LHAG+DD
Sbjct: 94  RTVPAAGIGSHSHQRPHRRQALHAGDDD 121


>11_03_0078 - 9662677-9663642,9666589-9666747
          Length = 374

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = -2

Query: 523 LVSSLGRRTPPASKRTRSNRSSGSSQPASDRDALYAIGSASSSPA 389
           + ++L  R P  S  TRS  ++GS +  + R  ++ +GS+SSS A
Sbjct: 9   VAATLHPRPPSDSGGTRS-AAAGSGRDENRRRRIWPVGSSSSSAA 52


>10_01_0129 + 1535823-1537196
          Length = 457

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = -2

Query: 490 ASKRTRSNRSSGSSQPASDRDALYAIGSASSSPAWRTXRRGRWPAPSGVP 341
           +S+R R + SS +S P   R            P  R  RRG  P+PS VP
Sbjct: 38  SSRRPRPSGSSPTSSPGQIRSP--PDDGDGQPPPPRRRRRGEPPSPSPVP 85


>04_04_1032 -
           30259180-30260519,30260650-30260720,30261099-30262118,
           30263886-30264121
          Length = 888

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -2

Query: 409 SASSSPAWRTXRRGRWP 359
           S S+SPAWRT RR   P
Sbjct: 722 STSASPAWRTGRRTAMP 738


>01_01_1100 +
           8716853-8716860,8717739-8717844,8717931-8718015,
           8718632-8718715,8718969-8719073,8719621-8719898
          Length = 221

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -2

Query: 505 RRTPPASKRTRSNRSSGSSQPASDRDALYAIGSASSSPA 389
           +++  +SK+TRS  +SGS   +S   A  ++G  S+ PA
Sbjct: 126 KKSAGSSKKTRSRFTSGSKNRSSQGSA-QSLGQQSAEPA 163


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,639,952
Number of Sequences: 37544
Number of extensions: 259085
Number of successful extensions: 1018
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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