Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060152.seq
(568 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 23 1.8
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 23 1.8
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 23 2.4
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 22 3.2
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 22 3.2
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 5.6
Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor ... 21 7.3
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 21 7.3
DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11 pro... 21 9.7
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 21 9.7
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 23.0 bits (47), Expect = 1.8
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -1
Query: 493 PGPLHNRSAGPAKPGPLHN 437
PG N+ AG PGP N
Sbjct: 284 PGTYINKEAGGGSPGPYTN 302
Score = 20.6 bits (41), Expect = 9.7
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1
Query: 454 PGPLHNRSAGPASPG 410
PG N+ AG SPG
Sbjct: 284 PGTYINKEAGGGSPG 298
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 23.0 bits (47), Expect = 1.8
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +1
Query: 427 QHSGYGAARA*RGQHSGYGAARA*RGPDSATEAG-PGLAGA 546
Q GYG R H A A GP +AG P GA
Sbjct: 30 QQHGYGPLRTSYQHHFNSPAGNAHTGPTGTHDAGFPSPRGA 70
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 22.6 bits (46), Expect = 2.4
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Frame = +2
Query: 320 PDLDASVPSPALYLQCGPGSSRASTPVMEXPG---TSGASTPVMERPGLSGASTPVMERP 490
P + P P + P + ++P+++ PG TS S VM P + + V
Sbjct: 73 PSDGTTSPEPDPEIPVAPEPAPLASPLVQEPGSSTTSATSGAVMASPPMPITTDNVAAIS 132
Query: 491 GPSGGQTQPPKRAPD 535
G P AP+
Sbjct: 133 GVLRSLLDRPLPAPE 147
Score = 21.4 bits (43), Expect = 5.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -3
Query: 278 GAPLPS*GPWVLQWATGQQLFNEP 207
GAP W ++W QQ N P
Sbjct: 11 GAPPQEMPTWFVRWLNSQQPRNVP 34
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 22.2 bits (45), Expect = 3.2
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -1
Query: 541 PLVRGPLRWLSLAPARPGPLHNRSAGPAKPGPLHNRSAGPAS 416
P VR P LS GP+++ P PGPL S PAS
Sbjct: 70 PDVRPPSSSLSYG----GPVNDDVRSPGTPGPL---SQAPAS 104
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 22.2 bits (45), Expect = 3.2
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -1
Query: 541 PLVRGPLRWLSLAPARPGPLHNRSAGPAKPGPLHNRSAGPAS 416
P VR P LS GP+++ P PGPL S PAS
Sbjct: 226 PDVRPPSSSLSYG----GPVNDDVRSPGTPGPL---SQAPAS 260
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.4 bits (43), Expect = 5.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 345 HLPYIYNVGLGVAGLAPRSWSXPGL 419
HLPY + L+P++ S P L
Sbjct: 285 HLPYFAAAVAAASNLSPKTNSSPDL 309
>Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor
5-like protein protein.
Length = 162
Score = 21.0 bits (42), Expect = 7.3
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 107 GCITLGFHVLYEKFHKTDKFI 45
GC G+H E HK FI
Sbjct: 35 GCKACGYHSPLESNHKLVTFI 55
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.0 bits (42), Expect = 7.3
Identities = 12/41 (29%), Positives = 14/41 (34%)
Frame = +2
Query: 257 PKRARVLPPKVGKHPGSEFWRPDLDASVPSPALYLQCGPGS 379
P+ A P HP +E D D V L C S
Sbjct: 30 PETALEAPKSPENHPETELSDSDCDLDVTGTPPPLDCSKNS 70
>DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11
protein.
Length = 366
Score = 20.6 bits (41), Expect = 9.7
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 410 PGTSGASTPVMERPGLSG 463
P T+G + P + PG+ G
Sbjct: 266 PATTGIAGPFTQSPGVLG 283
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 20.6 bits (41), Expect = 9.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 255 TLRGQGCSLLRSGNTQDRSS 314
++ G G L SGNT ++SS
Sbjct: 50 SMGGHGSLLSPSGNTPNKSS 69
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,605
Number of Sequences: 336
Number of extensions: 3007
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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