Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060152.seq
(568 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 34 0.093
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_13374| Best HMM Match : Cornifin (HMM E-Value=0.34) 32 0.28
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 32 0.38
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 32 0.38
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 31 0.50
SB_22411| Best HMM Match : Kinesin (HMM E-Value=6.8e-17) 31 0.50
SB_35586| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_39538| Best HMM Match : VWA (HMM E-Value=0) 31 0.87
SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_77| Best HMM Match : cNMP_binding (HMM E-Value=0.0097) 30 1.1
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 30 1.1
SB_57911| Best HMM Match : Drf_FH1 (HMM E-Value=2.3) 30 1.5
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 29 2.0
SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_45940| Best HMM Match : Vicilin_N (HMM E-Value=5.1) 29 2.0
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 2.0
SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17) 29 2.6
SB_53619| Best HMM Match : GPS (HMM E-Value=2.4e-15) 29 2.6
SB_48243| Best HMM Match : SAP (HMM E-Value=0.016) 29 2.6
SB_47687| Best HMM Match : SCP (HMM E-Value=1.8e-16) 29 2.6
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_5000| Best HMM Match : EGF_CA (HMM E-Value=0) 29 3.5
SB_55657| Best HMM Match : EGF_CA (HMM E-Value=0) 29 3.5
SB_41601| Best HMM Match : zf-C2H2 (HMM E-Value=0.0019) 29 3.5
SB_37766| Best HMM Match : IncA (HMM E-Value=0.4) 29 3.5
SB_32544| Best HMM Match : Extensin_2 (HMM E-Value=0.0062) 29 3.5
SB_40857| Best HMM Match : GLTT (HMM E-Value=0.85) 28 4.6
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 28 4.6
SB_33849| Best HMM Match : TrbI (HMM E-Value=3.8e-33) 28 4.6
SB_29976| Best HMM Match : PT (HMM E-Value=5.9) 28 4.6
SB_28466| Best HMM Match : Drf_FH1 (HMM E-Value=2.1) 28 4.6
SB_27315| Best HMM Match : Drf_FH1 (HMM E-Value=2.1) 28 4.6
SB_22693| Best HMM Match : DUF1042 (HMM E-Value=0.00027) 28 4.6
SB_10060| Best HMM Match : SAP (HMM E-Value=0.016) 28 4.6
SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015) 28 4.6
SB_4337| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_643| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_41641| Best HMM Match : PT (HMM E-Value=3.1) 28 6.1
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_32063| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_31478| Best HMM Match : Extensin_2 (HMM E-Value=1.3) 27 8.1
SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 27 8.1
SB_35576| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 33.9 bits (74), Expect = 0.093
Identities = 29/111 (26%), Positives = 37/111 (33%)
Frame = +2
Query: 236 PTGEPTDPKRARVLPPKVGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTPVMEXPG 415
P P DP R+ P P + P + P P + GP P M+
Sbjct: 224 PMDRPMDPGGPRMDHPMGHGGPPMDRGGPPMMHGGPGPRMP-HSGPEPVPPGGPPMQGGP 282
Query: 416 TSGASTPVMERPGLSGASTPVMERPGPSGGQTQPPKRAPD*RGPATSGHRA 568
P M+ P + M GP G PP+ P GPA G A
Sbjct: 283 NMRGPHPRMDPPRSMSSDIRPMHDMGPRGSPQGPPQVTPGMPGPAGMGAAA 333
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 32.3 bits (70), Expect = 0.28
Identities = 21/69 (30%), Positives = 29/69 (42%)
Frame = +2
Query: 320 PDLDASVPSPALYLQCGPGSSRASTPVMEXPGTSGASTPVMERPGLSGASTPVMERPGPS 499
PD+ PSPA S +S+ + P STP L +STP + P S
Sbjct: 99 PDVGTQQPSPASPTSIKQ-SPNSSSSTGQTPTEKTDSTPKSSGSTLPTSSTPATQNPTDS 157
Query: 500 GGQTQPPKR 526
T+PP +
Sbjct: 158 SLSTKPPTK 166
>SB_13374| Best HMM Match : Cornifin (HMM E-Value=0.34)
Length = 1197
Score = 32.3 bits (70), Expect = 0.28
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Frame = +2
Query: 224 AARSPTGEPTDPKRARVLPPKVGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTP-- 397
AA SP P P PG+E AS +P L PG++ +STP
Sbjct: 964 AATSPVSPAAAPSTTPGAAPSTT--PGAESSSTPGAASSSTPGAALSRTPGAAPSSTPGA 1021
Query: 398 -VMEXPGTSGASTP---VMERPGLSGASTP 475
PG + +STP + PG + +STP
Sbjct: 1022 ASSTTPGAAPSSTPGAAMSSIPGATSSSTP 1051
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +2
Query: 332 ASVPSPALYLQCGPGSSRASTP---VMEXPGTSGASTPVMERPGLSGASTPVMERPGPS 499
AS +P PG++ +S P PG + +STP GA++ + R PS
Sbjct: 1022 ASSTTPGAAPSSTPGAAMSSIPGATSSSTPGAASSSTPGAAPSSTPGAASSITRRADPS 1080
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 32.3 bits (70), Expect = 0.28
Identities = 21/72 (29%), Positives = 27/72 (37%)
Frame = +2
Query: 341 PSPALYLQCGPGSSRASTPVMEXPGTSGASTPVMERPGLSGASTPVMERPGPSGGQTQPP 520
P PA + PGS P +E P S TPV P + + P P + P
Sbjct: 184 PQPAEESRTPPGSRSTPEPSLEEPEVSAMGTPV-STPQATVQTPPPPPEPSNEPSTSSKP 242
Query: 521 KRAPD*RGPATS 556
K +P TS
Sbjct: 243 KASPSPSSITTS 254
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 31.9 bits (69), Expect = 0.38
Identities = 28/85 (32%), Positives = 36/85 (42%)
Frame = +2
Query: 278 PPKVGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTPVMEXPGTSGASTPVMERPGL 457
PP +H GS P+ + P P G G S+ S P +G+S P+ P
Sbjct: 196 PPPHSRH-GSAPPPPERSSGPPPPPP----GRGPSQRSLA----PPPTGSSRPLPAPPPG 246
Query: 458 SGASTPVMERPGPSGGQTQPPKRAP 532
P M P SGG+ PPK AP
Sbjct: 247 ENRPPPPMRGP-TSGGEPPPPKNAP 270
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 31.9 bits (69), Expect = 0.38
Identities = 28/85 (32%), Positives = 36/85 (42%)
Frame = +2
Query: 278 PPKVGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTPVMEXPGTSGASTPVMERPGL 457
PP +H GS P+ + P P G G S+ S P +G+S P+ P
Sbjct: 108 PPPHSRH-GSAPPPPERSSGPPPPPP----GRGPSQRSLA----PPPTGSSRPLPAPPPG 158
Query: 458 SGASTPVMERPGPSGGQTQPPKRAP 532
P M P SGG+ PPK AP
Sbjct: 159 ENRPPPPMRGP-TSGGEPPPPKNAP 182
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Frame = +2
Query: 395 PVMEXPGTSGASTPVMERPGLSGASTPVMER---PGPSGGQTQPPKRAPD*RGPATSGHR 565
P M PG G P M P G P ME+ P PS G + P + P GH+
Sbjct: 264 PPMGMPGMGGMPPPGMPPPMPPGGMPPNMEQPPPPPPSSGVSNSGMMPPHMQNPQHMGHQ 323
>SB_22411| Best HMM Match : Kinesin (HMM E-Value=6.8e-17)
Length = 505
Score = 31.5 bits (68), Expect = 0.50
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = +2
Query: 224 AARSPTGEPTDPKRARVLPPKVGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTPVM 403
AA SP G PT P+R+ + P S+ P S+ PGS+ A+
Sbjct: 270 AAPSPPGTPTQPRRSNLPQPSKNHASRSQSPAPPRGRSLKRSK---SPAPGSAAAARSRS 326
Query: 404 EXPGTSGASTP 436
P S STP
Sbjct: 327 PSPARSSTSTP 337
>SB_35586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 31.1 bits (67), Expect = 0.66
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 478 NRSAGPAKPGPLHNRSAGPASP 413
+R++GPA P P RSAGPA P
Sbjct: 32 SRASGPAHPLPYRIRSAGPAQP 53
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 31.1 bits (67), Expect = 0.66
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 236 PTGEPTDPK--RARVLPPKVGKHPGSEFWRPDLDASVPSP 349
PT +P P +LPP G HP + P L A VP+P
Sbjct: 276 PTSQPPPPPPLTGGMLPPPFGGHPAAAPPPPPLPAGVPAP 315
>SB_39538| Best HMM Match : VWA (HMM E-Value=0)
Length = 3208
Score = 30.7 bits (66), Expect = 0.87
Identities = 31/115 (26%), Positives = 43/115 (37%), Gaps = 3/115 (2%)
Frame = +2
Query: 233 SPTGEPTDPKRARVLPP--KVGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTPVME 406
SP +PT P +PP + PG PSP + PGS +P
Sbjct: 1332 SPLNQPTFPGFPGFVPPGTSISNFPG-----------FPSPGSGIPGSPGSGIPGSPGSG 1380
Query: 407 XPGTSGASTPVMERPGLSGA-STPVMERPGPSGGQTQPPKRAPD*RGPATSGHRA 568
PG+ G+ P G+ G+ + + PG SG P P G G+ A
Sbjct: 1381 IPGSPGSGIPGSPGSGIPGSPGSGIPGSPG-SGIPGSPGSGIPGSPGSGIPGNPA 1434
>SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1094
Score = 30.7 bits (66), Expect = 0.87
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2
Query: 392 TPVMEXPGTSGASTPVMERPGLSGASTPVMERPGPSGGQTQPPK 523
T + P + TP R +SG V PGP G QPP+
Sbjct: 208 TIMRNNPNRPVSVTPSTSRSHMSGGDLAVATSPGPHPGHWQPPR 251
>SB_77| Best HMM Match : cNMP_binding (HMM E-Value=0.0097)
Length = 498
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = +2
Query: 374 GSSRASTPVMEXPGTSGASTPVMERPGLSGASTPVMERPGPSGGQTQPPKRAPD*RGPAT 553
GSS A++P S S P + PG S +P +P P GG+ +R+ P T
Sbjct: 210 GSSAAASPDSGLASFSAGSDPKVSAPGNSDDHSP--SKPIPVGGKVL--RRSVSFTEPDT 265
Query: 554 SGHR 565
S HR
Sbjct: 266 SPHR 269
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -1
Query: 502 PARPGPLHNRS--AGPAKPGPLHNRSAGPA 419
PA PGPLH GP PGP+ N GPA
Sbjct: 1252 PAGPGPLHGYGPDTGPYAPGPMFN---GPA 1278
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 466 GPAKPGPLH--NRSAGPASPGXLHDRGASPATP 374
GPA PGPLH GP +PG + + G +P P
Sbjct: 1251 GPAGPGPLHGYGPDTGPYAPGPMFN-GPAPYRP 1282
>SB_57911| Best HMM Match : Drf_FH1 (HMM E-Value=2.3)
Length = 169
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/83 (28%), Positives = 31/83 (37%)
Frame = +2
Query: 272 VLPPKVGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTPVMEXPGTSGASTPVMERP 451
+L + K PG RP + S P P Y P SR P E P + P ERP
Sbjct: 14 ILHSRAVKRPGDGRSRPPSE-SRPRPP-YDDRPPSESRPRPPYDERPPSESRPRPPYERP 71
Query: 452 GLSGASTPVMERPGPSGGQTQPP 520
P + S + +PP
Sbjct: 72 PSESRPRPPYDDRRTSETRPRPP 94
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +2
Query: 368 GPGSSRASTPVMEXPGTSGASTPVMERPGLSGASTPVMERPGPSGGQTQP-PKRAPD*RG 544
GP ++ PG G P PGL G P M PGP G P PK P G
Sbjct: 259 GPNGLPGPNGILGPPGPPGDMGP----PGLPGPPGPQMP-PGPPGLPGAPGPKGPPGTNG 313
Query: 545 P 547
P
Sbjct: 314 P 314
Score = 28.7 bits (61), Expect = 3.5
Identities = 33/105 (31%), Positives = 37/105 (35%), Gaps = 1/105 (0%)
Frame = +2
Query: 236 PTGEPTDPKRARVLPPKVGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTPVMEXPG 415
P G P L P P P L + +PA +Q GP + PG
Sbjct: 132 PPGPAGPPGTNGELGPPGDVGPPGNPGGPGLQGNHGNPA-GIQ-GPNGLPGPNGPLGPPG 189
Query: 416 TSGASTPVMERPGLSGASTPVMERPGPSGGQTQP-PKRAPD*RGP 547
G P PGL G P M PGP G P PK P GP
Sbjct: 190 PPGDMGP----PGLPGPQGPQMP-PGPPGLPGAPGPKGPPGTNGP 229
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 410 PGTSGASTPVME--RPGLSGASTPVMERPGPSGGQTQP-PKRAPD*RGP 547
PG +G P+ + PGL G P M PGP G P PK P GP
Sbjct: 352 PGINGPPGPLGDVGPPGLPGPPGPQMP-PGPPGLPGAPGPKGPPGTNGP 399
>SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 29.5 bits (63), Expect = 2.0
Identities = 31/111 (27%), Positives = 39/111 (35%), Gaps = 11/111 (9%)
Frame = +2
Query: 236 PTGEPTDPKRARVLPPKVGKHPGSEFW--RPDLDA------SVPSPALYLQCGPGSSRAS 391
PT T P+ A + P + PG RP A S P L G + A
Sbjct: 446 PTSGTTQPEGAAAVVPPLPLSPGPHIGIERPRASAKISLLDSAPGQLLPPPSGKFAREAI 505
Query: 392 TPVMEXPGTSGASTPVMERPGLSGASTPVM---ERPGPSGGQTQPPKRAPD 535
TS +S P +TPV+ E+ P G T PP PD
Sbjct: 506 KESDSDSDTSDSSPPTSPTQQSPLETTPVLPLPEKVTPEPGSTTPPSPPPD 556
>SB_45940| Best HMM Match : Vicilin_N (HMM E-Value=5.1)
Length = 454
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 489 GRSITGVLAPLSPGRSITGVLAPLVPGXSMTGV 391
GR++TGV GR++TGV G ++TGV
Sbjct: 88 GRTLTGVYNKEKEGRALTGVYNKEKEGRTLTGV 120
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 489 GRSITGVLAPLSPGRSITGVLAPLVPGXSMTGV 391
GR++TGV GR++TGV G ++TGV
Sbjct: 101 GRALTGVYNKEKEGRTLTGVYNKEKEGRTLTGV 133
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 489 GRSITGVLAPLSPGRSITGVLAPLVPGXSMTGV 391
GR++TGV GR++TGV G ++TGV
Sbjct: 114 GRTLTGVYNKEKEGRTLTGVYNKEKEGRTLTGV 146
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 489 GRSITGVLAPLSPGRSITGVLAPLVPGXSMTGV 391
GR++TGV GR++TGV G ++TGV
Sbjct: 127 GRTLTGVYNKEKEGRTLTGVYNKEKEGRTLTGV 159
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 489 GRSITGVLAPLSPGRSITGVLAPLVPGXSMTGV 391
GR++TGV GR++TGV G ++TGV
Sbjct: 296 GRTLTGVYNKEKEGRTLTGVYNKEKEGRTLTGV 328
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = -2
Query: 489 GRSITGVLAPLSPGRSITGVLAPLVPGXSMTGVL-----ARLLPGPHCKYRAG 346
GR++T V GR++TGV G ++TGV R L G H K + G
Sbjct: 283 GRTLTDVYNKEKEGRTLTGVYNKEKEGRTLTGVYNKEKEGRTLTGVHNKEKEG 335
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = -2
Query: 489 GRSITGVLAPLSPGRSITGVLAPLVPGXSMTGVL-----ARLLPGPHCKYRAGDG 340
GR++TGV G+++TG+ G ++TGV R L G + K + G G
Sbjct: 153 GRTLTGVYNKEKEGQTLTGLYNKEKEGRTLTGVYNKEKEGRTLTGVYNKEKEGKG 207
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 489 GRSITGVLAPLSPGRSITGVLAPLVPGXSMTGV 391
GR++TGV GR++TGV G ++TGV
Sbjct: 309 GRTLTGVYNKEKEGRTLTGVHNKEKEGRTLTGV 341
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 489 GRSITGVLAPLSPGRSITGVLAPLVPGXSMTGV 391
GR++TGV GR++TG+ G ++TGV
Sbjct: 62 GRTLTGVYNKEKEGRTLTGLYNKEKEGRTLTGV 94
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 489 GRSITGVLAPLSPGRSITGVLAPLVPGXSMTGV 391
GR++TG+ GR++TGV G ++TGV
Sbjct: 75 GRTLTGLYNKEKEGRTLTGVYNKEKEGRALTGV 107
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 489 GRSITGVLAPLSPGRSITGVLAPLVPGXSMTGV 391
GR++TGV GR++TGV G ++TG+
Sbjct: 140 GRTLTGVYNKEKEGRTLTGVYNKEKEGQTLTGL 172
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 489 GRSITGVLAPLSPGRSITGVLAPLVPGXSMTGV 391
GR++TGV GR++TGV G ++TG+
Sbjct: 23 GRTLTGVHNKEKEGRTLTGVYNKEKEGQTLTGL 55
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = -1
Query: 505 APARPGPLHNRSAGPAKPGPLHNRSAGPASPGXLHDRGASPATPRP 368
AP P P+ + GP P P+ + GP P + PA P
Sbjct: 137 APPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVP 182
>SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1013
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +2
Query: 341 PSPALYLQCGPG-----SSRASTPVMEXPGTSGASTPVMERPGLS 460
PSP L GPG S + P PG++ AS P +E+P L+
Sbjct: 471 PSPPLTRDTGPGTGTTGSDTPTRPPETEPGSAEASEPKLEKPCLA 515
>SB_53619| Best HMM Match : GPS (HMM E-Value=2.4e-15)
Length = 457
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 230 RSPTGEPTDPKRARVLPPKVGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTPVMEX 409
++PT PTDP + P G + + S AL P S PV+
Sbjct: 65 QAPTSHPTDPTTSHPTDP-----TGFSEAQLSVIRKTVSDALASWRPPQQDTPSPPVVAS 119
Query: 410 PGTSGASTP-VMERP 451
GT G+++P V++RP
Sbjct: 120 EGTPGSASPLVLDRP 134
>SB_48243| Best HMM Match : SAP (HMM E-Value=0.016)
Length = 262
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 230 RSPTGEPTDPKRARVLPPKVGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTPVMEX 409
++PT PTDP + P G + + S AL P S PV+
Sbjct: 65 QAPTSHPTDPTTSHPTDP-----TGFSEAQLSVIRKTVSDALASWRPPQQDTPSPPVVAS 119
Query: 410 PGTSGASTP-VMERP 451
GT G+++P V++RP
Sbjct: 120 EGTPGSASPLVLDRP 134
>SB_47687| Best HMM Match : SCP (HMM E-Value=1.8e-16)
Length = 600
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +2
Query: 320 PDLDASVPSPALYLQCGPGSSRASTPVMEXPGTSGASTPVMERPGLSGASTP 475
P+++ PS A Q GP ++ P P G + M+ PG S + P
Sbjct: 334 PEMEGPGPSAA-DTQAGPNAAEMQVPGASAPEMQGLGSNSMQEPGQSQSDMP 384
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +2
Query: 410 PGTSGASTPVMERPGLSGASTP-----VMERPG--PSGGQTQPPKRAPD*RGPATS 556
P T GA++ +R G S A T V E G PS TQ AP+ GP S
Sbjct: 287 PATGGANSVEAQRLGPSVADTQGPGPNVQETQGHGPSAADTQAGPNAPEMEGPGPS 342
>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = +2
Query: 266 ARVLPPKVGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTPVMEXPGTSGASTPVME 445
A++LPP G P S P P P L P +S P+M PG + P
Sbjct: 676 AQMLPPMPG--PPSSMSGPTTSRHGPPPT-GLTMNPPTSMGMAPMMPPPGPGMGTHPQQV 732
Query: 446 RPG 454
PG
Sbjct: 733 SPG 735
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/63 (30%), Positives = 23/63 (36%)
Frame = +2
Query: 371 PGSSRASTPVMEXPGTSGASTPVMERPGLSGASTPVMERPGPSGGQTQPPKRAPD*RGPA 550
P +S V P G + P+ P G S P +P P GG PP P P
Sbjct: 910 PSASPPGGSVPPPPPPPGGNAPLPPPP--PGGSAP--SQPPPPGGNAPPPPPPPGGSAPP 965
Query: 551 TSG 559
G
Sbjct: 966 PGG 968
>SB_5000| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1050
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 392 TPVMEXPGTSGASTPVMERPGLSGAS 469
TP P T G TPV R G SGAS
Sbjct: 669 TPANATPPTVGVHTPVQTRVGSSGAS 694
>SB_55657| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 868
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 392 TPVMEXPGTSGASTPVMERPGLSGAS 469
TP P T G TPV R G SGAS
Sbjct: 444 TPANATPPTVGVHTPVQTRVGSSGAS 469
>SB_41601| Best HMM Match : zf-C2H2 (HMM E-Value=0.0019)
Length = 1008
Score = 28.7 bits (61), Expect = 3.5
Identities = 25/95 (26%), Positives = 33/95 (34%)
Frame = +2
Query: 236 PTGEPTDPKRARVLPPKVGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTPVMEXPG 415
P G P P +AR L P + ++ W + S P + PG A
Sbjct: 267 PPGAPLRPYQARPLRPDM-----AQTWATPMGQSTQGPNVP-GIRPGMDGAQRGTTPQGW 320
Query: 416 TSGASTPVMERPGLSGASTPVMERPGPSGGQTQPP 520
ST RPG++G TP G G P
Sbjct: 321 QQAPSTTAQVRPGVAGYPTPQEAAAGFVGRSYMQP 355
>SB_37766| Best HMM Match : IncA (HMM E-Value=0.4)
Length = 585
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 219 ELLPGRPLENPRTLRGQGCSLLRSGNTQDR 308
ELLPG P+ +PR + + CSL S +R
Sbjct: 259 ELLPGLPIRSPRFVALRQCSLFNSWYNLER 288
>SB_32544| Best HMM Match : Extensin_2 (HMM E-Value=0.0062)
Length = 282
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/71 (30%), Positives = 26/71 (36%)
Frame = +2
Query: 320 PDLDASVPSPALYLQCGPGSSRASTPVMEXPGTSGASTPVMERPGLSGASTPVMERPGPS 499
P V SP P S + S V P S A+ P +P L S P P PS
Sbjct: 95 PQPSLQVRSPPFKSAAFPSSPQPSLQVHSPPFKS-AAFPSSPQPSLQVRSPPFKSTPRPS 153
Query: 500 GGQTQPPKRAP 532
Q R+P
Sbjct: 154 SPQPSFQVRSP 164
>SB_40857| Best HMM Match : GLTT (HMM E-Value=0.85)
Length = 216
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 374 GSSRASTPVMEXPGTSGASTPVMERPGLSGASTPVMERPGPSGGQT 511
G + AST G +GAST G++GAST G +G T
Sbjct: 15 GGTGASTTGKPSMGVTGASTTGKPSMGVTGASTTGKPSMGVTGAST 60
Score = 27.9 bits (59), Expect = 6.1
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Frame = +2
Query: 221 VAARSPTGEPT--DPKRARVLPPKVGKHPGSEFWRPDLDASVPSPALYLQCG-PGSSRAS 391
V S TG+P+ + P +G S +P + + S G G+S
Sbjct: 3 VTGASSTGKPSMGGTGASTTGKPSMGVTGASTTGKPSMGVTGASTTGKPSMGVTGASTTG 62
Query: 392 TPVMEXPGTSGASTPVMERPGLSGASTPVMERPGPSGGQT 511
P M G +GAST G++GAST G +G T
Sbjct: 63 KPSM---GVTGASTTGKPSMGVTGASTTGKPSMGVTGAST 99
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 374 GSSRASTPVMEXPGTSGASTPVMERPGLSGASTPVMERPGPSGGQT 511
G + AST G +GAST G++GAST G +G T
Sbjct: 67 GVTGASTTGKPSMGVTGASTTGKPSMGVTGASTTGKPSMGVTGAST 112
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 374 GSSRASTPVMEXPGTSGASTPVMERPGLSGASTPVMERPGPSGGQT 511
G + AST G +GAST G++GAST G +G T
Sbjct: 80 GVTGASTTGKPSMGVTGASTTGKPSMGVTGASTTGKPSMGVTGAST 125
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 28.3 bits (60), Expect = 4.6
Identities = 32/109 (29%), Positives = 38/109 (34%), Gaps = 11/109 (10%)
Frame = +2
Query: 224 AARSPTGEPTDPKRARVLPPKVGKHPGS-------EFWRPDLDASVPSPALY--LQCGPG 376
+A SP P + + ++ PP P S +P S PSP L G
Sbjct: 240 SAFSPVNTPPNAQAQQMTPPSSAAPPQSLPGLQTSPSLQPPSQRSTPSPQSMSALHSGKP 299
Query: 377 SSRASTPVMEXPGTSG-ASTPVMERPGLSGASTPVMERP-GPSGGQTQP 517
P P S A P P SGASTP P G G QP
Sbjct: 300 KRPGMPPSPSVPHQSQPAVPPAFATPPRSGASTPSGAPPTGDEGMAPQP 348
Score = 27.5 bits (58), Expect = 8.1
Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 3/95 (3%)
Frame = +2
Query: 257 PKRARVLPPKVGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTPVMEXPGTSGASTP 436
P R +V PP HP S + P P+ + GP S P +GAS
Sbjct: 101 PGRPQV-PP--ASHPNSAQYPPSSSFGANMPSNQVLNGPSSRGTPPPGSRQMDQTGASQQ 157
Query: 437 VMERPGLSGASTPVMERP---GPSGGQTQPPKRAP 532
+ P S P +++P SG QP + P
Sbjct: 158 TRQPP----RSGPPVQQPYGMASSGQHAQPQSQRP 188
>SB_33849| Best HMM Match : TrbI (HMM E-Value=3.8e-33)
Length = 222
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +2
Query: 323 DLDASVPSPALYLQCGPGSSRASTPVMEXPGTSGASTPVMERPGLSGASTPVMERPGPSG 502
+ +A+ S + G G + A+T PG SGAST P +G ++ + P+
Sbjct: 2 EAEAAAASSVFFRSGGQGQA-AATVAQAAPGASGASTLAAFDPLAAGPASTAAQPADPTA 60
Query: 503 GQTQPPKR 526
Q + ++
Sbjct: 61 VQNRQEQK 68
>SB_29976| Best HMM Match : PT (HMM E-Value=5.9)
Length = 342
Score = 28.3 bits (60), Expect = 4.6
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 230 RSPTGEPTDPKRARVLPPKVGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTPVMEX 409
++PT PTDP + P G + + S AL P S PV+
Sbjct: 28 QAPTSHPTDPTTSHPTDP-----TGFSEAQLSVIGKTVSDALASWRPPQQDTPSPPVVAS 82
Query: 410 PGTSGASTPV-MERP 451
GT G+++P+ ++RP
Sbjct: 83 EGTPGSASPLGLDRP 97
>SB_28466| Best HMM Match : Drf_FH1 (HMM E-Value=2.1)
Length = 331
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 493 PGPLHNRSAGPAKPGPLHNRSAGPASPGXLHDRGASPATP 374
PG + + AG +PG + + AG PG + + A P
Sbjct: 110 PGEVSAKPAGDVEPGEVSAKPAGDVEPGEVSAKPAGDVEP 149
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 493 PGPLHNRSAGPAKPGPLHNRSAGPASPGXLHDRGASPATP 374
PG + + AG +PG + + AG PG + + A P
Sbjct: 123 PGEVSAKPAGDVEPGEVSAKPAGDVEPGEVSAKPAGDVEP 162
>SB_27315| Best HMM Match : Drf_FH1 (HMM E-Value=2.1)
Length = 300
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 493 PGPLHNRSAGPAKPGPLHNRSAGPASPGXLHDRGASPATP 374
PG + + AG +PG + + AG PG + + A P
Sbjct: 148 PGEVSAKPAGDVEPGEVSAKPAGDVEPGEVSAKPAGDVEP 187
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 493 PGPLHNRSAGPAKPGPLHNRSAGPASPGXLHDRGASPATP 374
PG + + AG +PG + + AG PG + + A P
Sbjct: 161 PGEVSAKPAGDVEPGEVSAKPAGDVEPGEVSAKPAGDVEP 200
>SB_22693| Best HMM Match : DUF1042 (HMM E-Value=0.00027)
Length = 2261
Score = 28.3 bits (60), Expect = 4.6
Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 5/112 (4%)
Frame = +2
Query: 227 ARSPTGEPTDPKRARVLPPKVGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTPVME 406
A+S + K A+ K PGS R SP+ + G SR+ +P +
Sbjct: 1153 AKSDSKSEKGTKSAKSAKSKGASTPGSPKSRQKTVKKDRSPSPTSKKGGSKSRSPSPTSK 1212
Query: 407 XPGTSGASTPVMERPGL---SGASTPVMER-PGPSGGQTQP-PKRAPD*RGP 547
+ + +P R G S S P +R P G +P ++ P+ GP
Sbjct: 1213 KGSRAASKSPSASRKGSGRGSRGSRPGSKRGKSPKKGMEEPEEEKPPEPTGP 1264
>SB_10060| Best HMM Match : SAP (HMM E-Value=0.016)
Length = 332
Score = 28.3 bits (60), Expect = 4.6
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 230 RSPTGEPTDPKRARVLPPKVGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTPVMEX 409
++PT PTDP + P G + + S AL P S PV+
Sbjct: 114 QAPTSHPTDPTTSHPTDP-----TGFSEAQLSVIGKTVSDALASWRPPQQDTPSPPVVAS 168
Query: 410 PGTSGASTPV-MERP 451
GT G+++P+ ++RP
Sbjct: 169 EGTPGSASPLGLDRP 183
>SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015)
Length = 592
Score = 28.3 bits (60), Expect = 4.6
Identities = 33/103 (32%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Frame = +2
Query: 242 GEPTDPKRARVLPPK--VGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTPVMEXPG 415
G T+ K A K VG G+ F D SVP L + G G ASTP P
Sbjct: 21 GTATNKKEAEANAAKDFVGFLIGAGFIPAD---SVPDEVL-AESGVGPPVASTPPAPQPV 76
Query: 416 TSGASTP--VMERPGLSGASTPVMERPGPSGG--QTQPPKRAP 532
+ P V + P + A+ PGPS PP+R P
Sbjct: 77 PNNMGPPPHVNQGPPPNSANQAPPPNPGPSPSFNSQGPPQRLP 119
>SB_4337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Frame = +1
Query: 424 GQHSGYGAARA*RGQHSGYGAARA*RG---PDSATEAGPGLAGASNFGPP 564
GQH GYG GYG +G P GP L G +GPP
Sbjct: 232 GQHQGYGTLPGPPPGQQGYGPPPGQQGYGAPPGQQGYGPPL-GQQGYGPP 280
>SB_643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 28.3 bits (60), Expect = 4.6
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +2
Query: 293 KHPGSEFWRPDLDASVPSPALY--LQCGPGSSRASTPVMEXPGTSGASTPVMERPGLSGA 466
K F P L +++ P++ +Q S STPV + G STPV G
Sbjct: 281 KKESETFEAPALISTITKPSMSTSVQGNMYSPGMSTPVQANITSPGMSTPVQGNMTSLGM 340
Query: 467 STPV 478
STPV
Sbjct: 341 STPV 344
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/50 (34%), Positives = 20/50 (40%)
Frame = +2
Query: 383 RASTPVMEXPGTSGASTPVMERPGLSGASTPVMERPGPSGGQTQPPKRAP 532
R ST + PG G S + PG G + PGP G Q P P
Sbjct: 3789 RPST-IAGPPGPPGRSKNISGPPGPQGPPGQASQIPGPPGPQGPPGPPGP 3837
>SB_41641| Best HMM Match : PT (HMM E-Value=3.1)
Length = 873
Score = 27.9 bits (59), Expect = 6.1
Identities = 28/107 (26%), Positives = 42/107 (39%)
Frame = +2
Query: 230 RSPTGEPTDPKRARVLPPKVGKHPGSEFWRPDLDASVPSPALYLQCGPGSSRASTPVMEX 409
+SP GE KR +V VG+ ++ RP + P + G + P
Sbjct: 692 QSPVGEAEPTKRPQV---PVGEAKPTK--RPQVPVGEAKPTKRPKAPVGEAE---PTKRP 743
Query: 410 PGTSGASTPVMERPGLSGASTPVMERPGPSGGQTQPPKRAPD*RGPA 550
G + P +RP + +RP G+T+P KR D G A
Sbjct: 744 KAPVGEAKPT-KRPQVPVGEAEPTKRPQAPVGETEPTKRPQDPVGQA 789
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 27.9 bits (59), Expect = 6.1
Identities = 20/75 (26%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Frame = +2
Query: 317 RPDLDASVPSPALYLQCGPGSSRASTPVMEXPGTSGASTPVMERPGL--SGASTPVMERP 490
+P P P P + P P S P +P S + P + P
Sbjct: 1018 KPPGPTEQPVPPKRKASPPSAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPP 1077
Query: 491 GPSGGQTQPPKRAPD 535
PS Q PP R PD
Sbjct: 1078 PPSTSQPVPPPRQPD 1092
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/73 (30%), Positives = 24/73 (32%)
Frame = +2
Query: 341 PSPALYLQCGPGSSRASTPVMEXPGTSGASTPVMERPGLSGASTPVMERPGPSGGQTQPP 520
PS + P SS P P P +PG GA TP PG PP
Sbjct: 961 PSQPMAPPSFPPSSMGGFPPSSQPSMYN---PGQVQPGYPGAMTPGAPSPGVPSPTGLPP 1017
Query: 521 KRAPD*RGPATSG 559
P GP G
Sbjct: 1018 SGPPP-TGPPADG 1029
>SB_32063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 504 PPLGPGRSITGVLAPLSPGRSITGVLAPLVP 412
PP+G R + L P P R +T L P P
Sbjct: 24 PPIGHSRFVPAHLPPYRPSRFVTSHLPPYRP 54
>SB_31478| Best HMM Match : Extensin_2 (HMM E-Value=1.3)
Length = 515
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Frame = -1
Query: 544 PPLVRGPLRWLSLAPARPGPLHNRSAGPAKPG--PLHNRSAGPASPGXLHDRGASPATPR 371
PP RGP P GP GP P P HN GP P DR PR
Sbjct: 361 PPDDRGPQD----RPPWDGPREQDFRGPRDPRAQPAHNPRPGPQDPRGPQDRRPPNEQPR 416
>SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 955
Score = 27.5 bits (58), Expect = 8.1
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Frame = +2
Query: 218 RVAARSPTGEPTDPKRARVLPPKVGKH---PGSEFWRPDLDASVPS--PALYLQCGPG-S 379
R++++ +G PT P+ R LPP+ P S R S+ S L LQ
Sbjct: 374 RLSSKEKSGPPTPPRHRRNLPPRPVSQMIMPSSRQGRSQEPTSMSSLLAGLSLQSNDSHH 433
Query: 380 SRASTP-VMEXPGTSGASTPVMER-----PGLSGASTPVMER 487
A++P + +S AS VM R P +G + P+ R
Sbjct: 434 GLANSPWTGDMSASSNASPVVMRRKAPVPPRTTGETVPISVR 475
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -1
Query: 502 PARPGPLHNRSAGPAKPGPLHNRSAGPASPGXLHDRGA 389
P RP P AGP GP +RS + G + R A
Sbjct: 316 PPRPQPQRPPRAGPGTAGPAPDRSTFGSKEGRMAARSA 353
>SB_35576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +2
Query: 368 GPGSSRASTPVMEXPGTSGASTPVMERPGLSGASTPVMERPGPSGGQTQP 517
G +TP E T + E GA+TP E PS G T P
Sbjct: 231 GAKEEAKTTPAPENSSTKPGAESGGETTPAPGATTPPSEETTPSAGGTTP 280
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,275,907
Number of Sequences: 59808
Number of extensions: 428740
Number of successful extensions: 1783
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1743
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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