Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060151.seq
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 161 3e-40
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 161 3e-40
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 151 4e-37
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 149 1e-36
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 29 2.2
AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical ... 29 2.2
Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical pr... 28 5.1
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 161 bits (392), Expect = 3e-40
Identities = 83/133 (62%), Positives = 95/133 (71%)
Frame = +2
Query: 254 LLSVAYKNVVGAXXXXXXXXXXXEQKTEGSXXKQQMAKEYRVKVEKELREICYDVLGLLD 433
LLSVAYKNVVGA EQKTEGS KQQMAKEYR KVEKELR+IC DVL LLD
Sbjct: 45 LLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLD 104
Query: 434 KHLIPKASNPESKVFYLQMKGDYYRTLQXVATXXTRHSVVEDSQKAYPDALXFSXAEMQX 613
K LIPKA ESKVFYL+MKGDYYR L VA+ R+SVVE SQ++Y +A + +MQ
Sbjct: 105 KFLIPKAGAAESKVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQP 164
Query: 614 TQPLKLGSCVKFS 652
T P++LG + FS
Sbjct: 165 THPIRLGLALNFS 177
Score = 75.4 bits (177), Expect = 3e-14
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERN 254
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERN
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERN 44
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 161 bits (392), Expect = 3e-40
Identities = 83/133 (62%), Positives = 95/133 (71%)
Frame = +2
Query: 254 LLSVAYKNVVGAXXXXXXXXXXXEQKTEGSXXKQQMAKEYRVKVEKELREICYDVLGLLD 433
LLSVAYKNVVGA EQKTEGS KQQMAKEYR KVEKELR+IC DVL LLD
Sbjct: 45 LLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLD 104
Query: 434 KHLIPKASNPESKVFYLQMKGDYYRTLQXVATXXTRHSVVEDSQKAYPDALXFSXAEMQX 613
K LIPKA ESKVFYL+MKGDYYR L VA+ R+SVVE SQ++Y +A + +MQ
Sbjct: 105 KFLIPKAGAAESKVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQP 164
Query: 614 TQPLKLGSCVKFS 652
T P++LG + FS
Sbjct: 165 THPIRLGLALNFS 177
Score = 75.4 bits (177), Expect = 3e-14
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERN 254
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERN
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERN 44
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 151 bits (366), Expect = 4e-37
Identities = 81/133 (60%), Positives = 94/133 (70%)
Frame = +2
Query: 254 LLSVAYKNVVGAXXXXXXXXXXXEQKTEGSXXKQQMAKEYRVKVEKELREICYDVLGLLD 433
LLSVAYKNVVGA EQKTEGS KQQ+AKEYRVKVE+EL +IC DVL LLD
Sbjct: 45 LLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLD 104
Query: 434 KHLIPKASNPESKVFYLQMKGDYYRTLQXVATXXTRHSVVEDSQKAYPDALXFSXAEMQX 613
+ LI KA ESKVFYL+MKGDYYR L VA+ R +VVE SQKAY +AL + +MQ
Sbjct: 105 EFLIVKAGAAESKVFYLKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQP 163
Query: 614 TQPLKLGSCVKFS 652
T P++LG + FS
Sbjct: 164 THPIRLGLALNFS 176
Score = 74.9 bits (176), Expect = 4e-14
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERN 254
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERN
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERN 44
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 149 bits (362), Expect = 1e-36
Identities = 80/133 (60%), Positives = 93/133 (69%)
Frame = +2
Query: 254 LLSVAYKNVVGAXXXXXXXXXXXEQKTEGSXXKQQMAKEYRVKVEKELREICYDVLGLLD 433
LLSVAYKNVVGA EQKTEGS KQQ+AKEYRVKVE+EL +IC DVL LLD
Sbjct: 45 LLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLD 104
Query: 434 KHLIPKASNPESKVFYLQMKGDYYRTLQXVATXXTRHSVVEDSQKAYPDALXFSXAEMQX 613
+ LI KA ESK FYL+MKGDYYR L VA+ R +VVE SQKAY +AL + +MQ
Sbjct: 105 EFLIVKAGAAESKAFYLKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQP 163
Query: 614 TQPLKLGSCVKFS 652
T P++LG + FS
Sbjct: 164 THPIRLGLALNFS 176
Score = 74.9 bits (176), Expect = 4e-14
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERN 254
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERN
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERN 44
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 494 GDYYRTLQXVATXXTRHSVVEDSQKAYPDALXFSXAEM 607
G+Y + L+ A+ TR + V D + + PD L F ++
Sbjct: 1026 GEYVKVLEEAASPATRATAVYDYEASQPDELGFKTGDV 1063
>AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical
protein Y45F10D.9 protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 150 QRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNSFQLLI 272
Q KL+ E +++M+ KE+ E VEL EER + +LL+
Sbjct: 210 QVEKLSGVKEEFEEMSEKFKEL-EDEVELVKEERENIRLLV 249
>Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical
protein M117.3 protein.
Length = 125
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 488 MKGDYYRTLQXVATXXTRHSVVEDSQKAYPDALXFSXAEMQXTQPLKLGSCVKFS 652
M D++R L R S+ AY +AL + +MQ T P++LG + S
Sbjct: 1 MVADHFRYLVQY-DDINREEHAHKSRIAYQEALGIAKDKMQPTHPIRLGLALNAS 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,484,428
Number of Sequences: 27780
Number of extensions: 238163
Number of successful extensions: 593
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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