Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060150.seq
         (678 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    45   0.002
UniRef50_Q55GH5 Cluster: Putative uncharacterized protein; n=1; ...    38   0.30 
UniRef50_Q174W5 Cluster: Blastoderm specific protein 25D, putati...    36   0.69 
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    36   0.91 
UniRef50_Q6NN29 Cluster: RE24122p; n=9; Diptera|Rep: RE24122p - ...    35   1.6  
UniRef50_A7FY47 Cluster: Exopolysaccharide biosynthesis family p...    34   2.8  
UniRef50_Q0SQR5 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_UPI0000F2B4C3 Cluster: PREDICTED: hypothetical protein;...    33   8.4  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 24/41 (58%), Positives = 27/41 (65%)
 Frame = +2

Query: 125 LATKGFPSELTHRHSPLSFSPDLLSWSRFRSGGRFCEALNL 247
           L T G  +E  HR  PLSFSPDLLS SRFR+G  + E L L
Sbjct: 381 LKTTGHSTENEHRCCPLSFSPDLLSGSRFRTGAEY-EMLGL 420


>UniRef50_Q55GH5 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 752

 Score = 37.5 bits (83), Expect = 0.30
 Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
 Frame = -1

Query: 450 SKFRGYLLYKRYYSGFLPRLF*NIFNNFYSDF----FSPTYADSLERLYQPLLD 301
           SKF+    +K++Y   +  LF NIFN+  S+     FS TY++SL+ +++ +L+
Sbjct: 607 SKFKDQEFFKKFYFNTIQYLFENIFNSTSSNIRHFKFSSTYSNSLQPIFKSILN 660


>UniRef50_Q174W5 Cluster: Blastoderm specific protein 25D, putative;
           n=1; Aedes aegypti|Rep: Blastoderm specific protein 25D,
           putative - Aedes aegypti (Yellowfever mosquito)
          Length = 505

 Score = 36.3 bits (80), Expect = 0.69
 Identities = 20/35 (57%), Positives = 25/35 (71%)
 Frame = +2

Query: 509 ILTRGVEEGRSLLDGVSGPLVATNSLAHELSQMSR 613
           +LT+GVEEGR+LL+G S      NSLA EL  MS+
Sbjct: 423 VLTKGVEEGRNLLNGTS------NSLAQELEAMSQ 451


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 35.9 bits (79), Expect = 0.91
 Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 170 PLSFSPDLLSWSRFRSGGRFCEALNLLGQY*QHT-RFEPREL 292
           P+ F       SRFRS GRFCEAL LLG    ++ R  P EL
Sbjct: 74  PMKFLAGSSQSSRFRSDGRFCEALLLLGLVLANSLRLSPYEL 115


>UniRef50_Q6NN29 Cluster: RE24122p; n=9; Diptera|Rep: RE24122p -
           Drosophila melanogaster (Fruit fly)
          Length = 528

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 19/43 (44%), Positives = 28/43 (65%)
 Frame = +2

Query: 509 ILTRGVEEGRSLLDGVSGPLVATNSLAHELSQMSRRPVAESFK 637
           +LT GVE+GR LL+G        NSLA EL +MS+  + ++F+
Sbjct: 456 MLTNGVEQGRHLLNG------TLNSLAQELEEMSQAQLQQAFQ 492


>UniRef50_A7FY47 Cluster: Exopolysaccharide biosynthesis family
           protein; n=4; Clostridium botulinum|Rep:
           Exopolysaccharide biosynthesis family protein -
           Clostridium botulinum (strain ATCC 19397 / Type A)
          Length = 410

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = -1

Query: 510 IGLVAPLELLIVLRSKNSIASKFRGYLLYKRYYSGFLPRLF*NIFNNFYSDFFS 349
           IGL++ L + +    K +  SK      YK +Y GF+  L   +F NF  +FFS
Sbjct: 333 IGLISLLGIFVSSVWKVNELSKKSNNTFYKYFYKGFIASLIAFMFMNFIDNFFS 386


>UniRef50_Q0SQR5 Cluster: Putative uncharacterized protein; n=1;
           Clostridium perfringens SM101|Rep: Putative
           uncharacterized protein - Clostridium perfringens
           (strain SM101 / Type A)
          Length = 382

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = +3

Query: 315 DIASQGYQHR*EKKNPNKNY*IYFKKAVVKTRYNSVYKVDSRETLTQLNFSN 470
           D    G +H  +KK P KNY +Y  ++++     +VYK+ S+E + +    N
Sbjct: 131 DNGESGKEHTLDKKEPKKNYVVYIGESLI-----TVYKIVSKENILKKYIDN 177


>UniRef50_UPI0000F2B4C3 Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 354

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 140 FPSELTHRHSPLSFSPDLLSWSRFRSGGRFCEALNLLGQY*QHTRFEPRE 289
           FP +L     PL+  PDLL  +   S     E+L+   QY   T+FEP +
Sbjct: 157 FPLKLRRLLHPLTLHPDLLEAAEKPSHASSIESLDNTNQYSHDTQFEPSD 206


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,263,579
Number of Sequences: 1657284
Number of extensions: 10936622
Number of successful extensions: 30358
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30348
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)