Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060149.seq
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   124   5e-31
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   124   5e-31
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   118   3e-29
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.1  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.3  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  124 bits (300), Expect = 5e-31
 Identities = 64/107 (59%), Positives = 78/107 (72%)
 Frame = +3

Query: 318 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFXVKSTAGDTHLGXED 497
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIF VK+TAGDTHLG ED
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 498 FEQSMVYHFVQEFKXEYQKGLRYQQESSLGVFVLXVKRAKXXLLSST 638
           F+  +V +  Q+FK +++  +      +L       +RAK  L S+T
Sbjct: 61  FDNRLVEYCTQDFKKKHKADIS-GNPRALRRLRTQCERAKRTLSSAT 106


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  124 bits (300), Expect = 5e-31
 Identities = 64/107 (59%), Positives = 78/107 (72%)
 Frame = +3

Query: 318 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFXVKSTAGDTHLGXED 497
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIF VK+TAGDTHLG ED
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 498 FEQSMVYHFVQEFKXEYQKGLRYQQESSLGVFVLXVKRAKXXLLSST 638
           F+  +V +  Q+FK +++  +      +L       +RAK  L S+T
Sbjct: 61  FDNRLVEYCTQDFKKKHKADIS-GNPRALRRLRTQCERAKRTLSSAT 106


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  118 bits (285), Expect = 3e-29
 Identities = 58/105 (55%), Positives = 81/105 (77%)
 Frame = +3

Query: 318 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFXVKSTAGDTHLGXED 497
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGTFDVSILTI++G+F V +T+GDTHLG ED
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGED 59

Query: 498 FEQSMVYHFVQEFKXEYQKGLRYQQESSLGVFVLXVKRAKXXLLS 632
           F+Q ++ +F++  K +++K +R   + +L      V++AK  L S
Sbjct: 60  FDQKVMDYFIKMVKQKHKKDIR-ADKKALQKLRREVEKAKRDLSS 103


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 91  DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 216
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 273 TKDAGTISGLNVLRIINEPTAA 338
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/61 (16%), Positives = 25/61 (40%)
 Frame = -1

Query: 524 KVVXHGLFKVLTSQVGVAGGGFHXEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVS 345
           K++   ++KVL  +   +G  +           G + G   +++D Y +    +  K + 
Sbjct: 210 KLLTSKIYKVLEEKYKTSGSLYTCWSEFTQKTQGQIYGIKVDIRDAYGNVKIPVLCKLIQ 269

Query: 344 N 342
           +
Sbjct: 270 S 270


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = -1

Query: 236 VITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCF-M 60
           +ITAF +VLP+ A  +++ F     L    K   +   Y +  + +  ++   +  C+ +
Sbjct: 87  LITAFLSVLPQLAWDITYRFYGGFLLCKVVKYGQTLGPYLSSYVLMATAIDRHQAICYPL 146

Query: 59  SACTVASSNLRPMRRLA 9
           + C+  S   + M  LA
Sbjct: 147 TYCSWTSRRSKVMVYLA 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,099
Number of Sequences: 336
Number of extensions: 3099
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)