Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060149.seq
(680 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 167 2e-42
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 162 4e-41
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 152 5e-38
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 136 2e-33
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 135 5e-33
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 78 1e-15
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 33 0.038
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.5
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 26 4.4
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 26 5.8
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 25 7.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 167 bits (405), Expect = 2e-42
Identities = 78/102 (76%), Positives = 89/102 (87%)
Frame = +3
Query: 255 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILT 434
DSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDLGGGTFDVS+LT
Sbjct: 150 DSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLT 209
Query: 435 IEDGIFXVKSTAGDTHLGXEDFEQSMVYHFVQEFKXEYQKGL 560
IE+GIF VK+TAGDTHLG EDF+ +V HF+QEFK + +K +
Sbjct: 210 IEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDI 251
Score = 130 bits (315), Expect = 1e-31
Identities = 59/82 (71%), Positives = 70/82 (85%)
Frame = +1
Query: 7 EAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMK 186
+AKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSMVL KM+
Sbjct: 67 DAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMR 126
Query: 187 ETAEAYLGKTVQNAVITVPAYF 252
ETAEAYLG V +AV+TVPAYF
Sbjct: 127 ETAEAYLGGKVTDAVVTVPAYF 148
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 162 bits (394), Expect = 4e-41
Identities = 77/102 (75%), Positives = 87/102 (85%)
Frame = +3
Query: 255 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILT 434
DSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDLGGGTFDVS+LT
Sbjct: 150 DSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLT 209
Query: 435 IEDGIFXVKSTAGDTHLGXEDFEQSMVYHFVQEFKXEYQKGL 560
IE+GIF VK+TAGDTHLG EDF+ +V HF QEFK + +K +
Sbjct: 210 IEEGIFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDI 251
Score = 123 bits (296), Expect = 3e-29
Identities = 55/82 (67%), Positives = 68/82 (82%)
Frame = +1
Query: 7 EAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMK 186
+AKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSMVL KM+
Sbjct: 67 DAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLLKMR 126
Query: 187 ETAEAYLGKTVQNAVITVPAYF 252
E+AEA+LG V +AV+TVPAYF
Sbjct: 127 ESAEAFLGGKVTDAVVTVPAYF 148
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 152 bits (368), Expect = 5e-38
Identities = 71/95 (74%), Positives = 81/95 (85%)
Frame = +3
Query: 255 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILT 434
DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLGGGTFDVS+L
Sbjct: 154 DSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLK 213
Query: 435 IEDGIFXVKSTAGDTHLGXEDFEQSMVYHFVQEFK 539
I+ G+F V +TAGDTHLG EDF+ ++V HF+QEFK
Sbjct: 214 IQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEFK 248
Score = 109 bits (263), Expect = 3e-25
Identities = 50/82 (60%), Positives = 63/82 (76%)
Frame = +1
Query: 7 EAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMK 186
+AKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+MVLTKMK
Sbjct: 71 DAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLTKMK 130
Query: 187 ETAEAYLGKTVQNAVITVPAYF 252
E +EA L K V+ AVITVPAYF
Sbjct: 131 EISEAKLNKRVEKAVITVPAYF 152
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 136 bits (330), Expect = 2e-33
Identities = 65/126 (51%), Positives = 95/126 (75%)
Frame = +3
Query: 255 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILT 434
D+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DLGGGTFDVS+L+
Sbjct: 183 DAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGGTFDVSLLS 241
Query: 435 IEDGIFXVKSTAGDTHLGXEDFEQSMVYHFVQEFKXEYQKGLRYQQESSLGVFVLXVKRA 614
I++G+F V +T+GDTHLG EDF+ ++ + + + + + + ++G V++A
Sbjct: 242 IDNGVFEVLATSGDTHLGGEDFDNRVINYLARTYNRKNNVDVT-KDLKAMGKLKREVEKA 300
Query: 615 KXXLLS 632
K L S
Sbjct: 301 KRTLSS 306
Score = 105 bits (252), Expect = 6e-24
Identities = 47/91 (51%), Positives = 68/91 (74%)
Frame = +1
Query: 7 EAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMK 186
+ KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M+L+KMK
Sbjct: 100 DIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMK 159
Query: 187 ETAEAYLGKTVQNAVITVPAYFKTLKDKPQK 279
+TAEAYLGK V +AV+TVPAYF + + K
Sbjct: 160 QTAEAYLGKPVTHAVVTVPAYFNDAQRQATK 190
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 135 bits (327), Expect = 5e-33
Identities = 63/95 (66%), Positives = 78/95 (82%)
Frame = +3
Query: 255 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILT 434
DSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDLGGGTFD+SIL
Sbjct: 196 DSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKKN--DAIVAVFDLGGGTFDISILE 253
Query: 435 IEDGIFXVKSTAGDTHLGXEDFEQSMVYHFVQEFK 539
+ +G+F V+ST GDTHLG EDF+ ++V H V+ FK
Sbjct: 254 LNNGVFEVRSTNGDTHLGGEDFDVALVRHIVETFK 288
Score = 77.8 bits (183), Expect = 1e-15
Identities = 36/80 (45%), Positives = 52/80 (65%)
Frame = +1
Query: 13 KRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKET 192
KRLIGR+F++ VQ D+K P+++V + KT+ P ++ +L+KM+ET
Sbjct: 118 KRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGFILSKMRET 174
Query: 193 AEAYLGKTVQNAVITVPAYF 252
A YLGK V+NAV+TVPAYF
Sbjct: 175 ASTYLGKDVKNAVVTVPAYF 194
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 78.2 bits (184), Expect = 1e-15
Identities = 40/103 (38%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Frame = +3
Query: 255 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVLIFDLGGGTFDV 422
D QR+A +A I+GLN LR++N+ AAA+ YG+ K E R V I D G + V
Sbjct: 154 DIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNYSV 213
Query: 423 SILTIEDGIFXVKSTAGDTHLGXEDFEQSMVYHFVQEFKXEYQ 551
SI+ G F +KST D +LG + +++++ +F EFK +Y+
Sbjct: 214 SIVEFSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYK 256
Score = 41.5 bits (93), Expect = 1e-04
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 13 KRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKE 189
KRL GR ++D ++ + ++ G KV Y E+ F ++ + TK+K
Sbjct: 72 KRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAYFTKIKA 131
Query: 190 TAEAYLGKTVQNAVITVPAYFKTLK 264
AEA L +V + VI++PA+F ++
Sbjct: 132 IAEAELIGSVSDVVISIPAWFTDIQ 156
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 33.1 bits (72), Expect = 0.038
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 130 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFKTLKDK 270
++K E S L ++ E+AE +LG V V++VP YF + K
Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRK 180
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 2.5
Identities = 28/126 (22%), Positives = 52/126 (41%)
Frame = -1
Query: 410 TAAEVKDKYISFSSTLFVKTVSNRSSSGFIDDSENVQA*DGTCIFCGLSLRVLKYAGTVI 231
+++ + + S SS L T S S+S I S + F S + I
Sbjct: 565 SSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSST------SSTFSSASTSSPSSISSSI 618
Query: 230 TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSAC 51
++ T+L + S + +S+ + S +LSS + + + SL+T S+
Sbjct: 619 SSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSIST---IPISSSLSTYSSSVIPSSS 675
Query: 50 TVASSN 33
T+ SS+
Sbjct: 676 TLVSSS 681
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = -2
Query: 508 DCSKSSXPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 365
D S+ + V+ D + +P + + T + PPR K + +P+P
Sbjct: 61 DYKSSAHEQRVNHTTDSMAHVPGNNSPLQTPQKSPPRQKHTAPATPIP 108
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 25.8 bits (54), Expect = 5.8
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +1
Query: 130 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFKTLK 264
+++ + EE+ +M + AE + + + V+TVP +F L+
Sbjct: 131 DEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQ 175
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 502 SKSSXPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSK 392
+KSS K VSP V SK +S V + S +P +K
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITK 239
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,702,915
Number of Sequences: 5004
Number of extensions: 54323
Number of successful extensions: 203
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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