Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060147.seq
(693 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 125 5e-30
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 125 7e-30
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 125 7e-30
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 73 4e-14
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 72 9e-14
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 55 8e-09
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.007
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.007
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 35 0.013
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 34 0.022
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 32 0.068
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 31 0.16
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.21
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.28
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.48
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 27 1.9
SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosa... 27 1.9
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 3.4
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 4.5
SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|c... 26 5.9
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 25 7.9
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 125 bits (302), Expect = 5e-30
Identities = 57/64 (89%), Positives = 60/64 (93%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 496
GITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISK 129
Query: 497 NGQT 508
+GQT
Sbjct: 130 DGQT 133
Score = 99 bits (238), Expect = 3e-22
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE 255
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATE 48
Score = 45.6 bits (103), Expect = 7e-06
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 255 MGKGSFKYAWVLDKLKAERE 314
+GKGSFKYAWVLDKLKAERE
Sbjct: 49 LGKGSFKYAWVLDKLKAERE 68
Score = 43.2 bits (97), Expect = 4e-05
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = +1
Query: 508 REHALLAFTLGVKQLIVXVNQNGXP*TTIQ*ARFEEIKRK 627
REHALLA+TLGVKQLIV VN+ T ARFEEI ++
Sbjct: 134 REHALLAYTLGVKQLIVAVNKMDT--TGWSQARFEEIVKE 171
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 125 bits (301), Expect = 7e-30
Identities = 56/64 (87%), Positives = 60/64 (93%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 496
GITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISK 129
Query: 497 NGQT 508
+GQT
Sbjct: 130 DGQT 133
Score = 99 bits (238), Expect = 3e-22
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE 255
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATE 48
Score = 45.6 bits (103), Expect = 7e-06
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 255 MGKGSFKYAWVLDKLKAERE 314
+GKGSFKYAWVLDKLKAERE
Sbjct: 49 LGKGSFKYAWVLDKLKAERE 68
Score = 43.2 bits (97), Expect = 4e-05
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = +1
Query: 508 REHALLAFTLGVKQLIVXVNQNGXP*TTIQ*ARFEEIKRK 627
REHALLA+TLGVKQLIV VN+ T ARFEEI ++
Sbjct: 134 REHALLAYTLGVKQLIVAVNKMDT--TGWSQARFEEIVKE 171
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 125 bits (301), Expect = 7e-30
Identities = 56/64 (87%), Positives = 60/64 (93%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 496
GITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISK 129
Query: 497 NGQT 508
+GQT
Sbjct: 130 DGQT 133
Score = 99 bits (238), Expect = 3e-22
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE 255
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATE 48
Score = 45.6 bits (103), Expect = 7e-06
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 255 MGKGSFKYAWVLDKLKAERE 314
+GKGSFKYAWVLDKLKAERE
Sbjct: 49 LGKGSFKYAWVLDKLKAERE 68
Score = 43.2 bits (97), Expect = 4e-05
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = +1
Query: 508 REHALLAFTLGVKQLIVXVNQNGXP*TTIQ*ARFEEIKRK 627
REHALLA+TLGVKQLIV VN+ T ARFEEI ++
Sbjct: 134 REHALLAYTLGVKQLIVAVNKMDT--TGWSQARFEEIVKE 171
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 72.9 bits (171), Expect = 4e-14
Identities = 36/95 (37%), Positives = 50/95 (52%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 496
G T+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG +
Sbjct: 301 GKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFER 360
Query: 497 NGQTVXXXXXXXXXXXXXXXXE*TKMDXPEPPYSE 601
GQT KMD P +SE
Sbjct: 361 GGQTREHAVLARTQGINHLVVVINKMDEPSVQWSE 395
Score = 62.9 bits (146), Expect = 4e-11
Identities = 27/48 (56%), Positives = 38/48 (79%)
Frame = +1
Query: 124 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKD 267
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E K+
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKE 283
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 71.7 bits (168), Expect = 9e-14
Identities = 34/64 (53%), Positives = 41/64 (64%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 496
G+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G +
Sbjct: 240 GVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLE 299
Query: 497 NGQT 508
NGQT
Sbjct: 300 NGQT 303
Score = 46.0 bits (104), Expect = 5e-06
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +1
Query: 124 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA 249
K +++VV GHVDSGKST G ++++ G I+ R+++K EA
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEA 216
Score = 31.5 bits (68), Expect = 0.12
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 258 GKGSFKYAWVLDKLKAER 311
GKGSF YAW+LD + ER
Sbjct: 220 GKGSFSYAWLLDTTEEER 237
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 487 YL*ERSNREHALLAFTLGVKQLIVXVNQ 570
+L REHA L LG+ +++V VN+
Sbjct: 297 FLENGQTREHAYLLRALGISEIVVSVNK 324
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 55.2 bits (127), Expect = 8e-09
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 475
GITI A ++ET+ + +D PGH D+IKNMITG + D A+++V+A G+
Sbjct: 101 GITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQ 153
Score = 35.1 bits (77), Expect = 0.010
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 118 KEKTHINIVVIGHVDSGKSTTTGHLIYKC 204
++K H+NI IGHVD GK+T T I KC
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76
Score = 29.9 bits (64), Expect = 0.36
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 508 REHALLAFTLGVKQLIVXVNQ 570
REH LLA +GVKQ++V +N+
Sbjct: 158 REHLLLARQVGVKQIVVYINK 178
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.007
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 207
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 362 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 457
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.007
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 207
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 362 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 457
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 34.7 bits (76), Expect = 0.013
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
GITI+ A F + +ID PGH DF + + D AV I+ G
Sbjct: 78 GITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129
Score = 28.7 bits (61), Expect = 0.84
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 136 NIVVIGHVDSGKSTTTGHLIYKCG 207
N+ +I H+D+GK+T T ++Y G
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG 53
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.9 bits (74), Expect = 0.022
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 317 GITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
GIT I + F+ ++T +D PGH F G + AD VL+VA G
Sbjct: 203 GITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 32.3 bits (70), Expect = 0.068
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +2
Query: 347 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
FE S Y + IID PGH DF + D AVL++ A +G
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSG 181
Score = 29.1 bits (62), Expect = 0.64
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 136 NIVVIGHVDSGKSTTTGHLIYKCGGI 213
NI + H+DSGK+T T ++Y G I
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI 86
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 31.1 bits (67), Expect = 0.16
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 365 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 460
+V+ +D PGH + M+ G + D A+L++A
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIA 140
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 30.7 bits (66), Expect = 0.21
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 338 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
++ + Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.28
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 362 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.48
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 374 IIDAPGHRDFIKNMITGTSQADCAVLIV 457
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.5 bits (58), Expect = 1.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 274 LKDPLPIPGPPSRTSRWYVCQYHHIC 197
+ PL P PP +T + Y QY+ +C
Sbjct: 1 MSTPLIPPAPPKKTLQLYTPQYYGLC 26
>SPAC4D7.09 |tif223||translation initiation factor
eIF2B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 468
Score = 27.5 bits (58), Expect = 1.9
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = -3
Query: 451 EHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDCDTXSRSAFSLSNTQAYL 272
EH+A+ L S +L IS R N GNI L S + + S + L+ + A
Sbjct: 5 EHAALPLASS-PSILGPISGGR--NRGNIQLQSIPIEFQAVVFAGFGNSLYPLTGSDALP 61
Query: 271 KDPLPIPGPP 242
K LPI P
Sbjct: 62 KALLPIGNKP 71
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 377 IDAPGHRDFIKNMITGTSQADCAVLIV 457
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 320 ITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 412
+ I+I + E +++ T+ID PG DFI N
Sbjct: 71 VEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +2
Query: 314 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 463
VG D ++K + + + + PGH D I+++ S LI A
Sbjct: 188 VGCMNDAYIYKQNSHGKWKKVAELPGHTDLIRDICWAPSMGSSYYLIATA 237
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 25.4 bits (53), Expect = 7.9
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Frame = +1
Query: 118 KEKTHINIVVIGHVDS----GKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKDPSNMLG 285
KE ++N+V D S++T + + K GI + +EK +N L
Sbjct: 288 KENVNLNLVKTPKYDDLTKMNLSSSTANTLIK--GIQSYNFQNYEKAYSLLAAGVTNSLL 345
Query: 286 YWTN*RLSVSXYHNRYCSLE 345
WTN +S Y C ++
Sbjct: 346 EWTNTSVSDKEYLRIQCFIQ 365
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,659,425
Number of Sequences: 5004
Number of extensions: 49847
Number of successful extensions: 207
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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