Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060147.seq
(693 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 149 2e-36
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 149 2e-36
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 133 1e-31
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 103 7e-25
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 103 9e-23
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 88 5e-18
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 88 5e-18
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 87 1e-17
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 58 5e-09
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 58 5e-09
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 58 5e-09
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 58 6e-09
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 58 6e-09
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.007
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.084
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.26
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.26
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 31 0.59
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 1.0
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 1.0
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 1.0
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.8
AC024791-38|AAY55888.1| 246|Caenorhabditis elegans Hypothetical... 30 1.8
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.3
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 28 7.3
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 28 7.3
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 28 7.3
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 9.6
U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain p... 27 9.6
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 9.6
AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein. 27 9.6
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 149 bits (361), Expect = 2e-36
Identities = 74/121 (61%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 496
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 497 NGQTVXXXXXXXXXXXXXXXXE*TKMDXPEPPYSEPDLRKSRGSIP-YIQXIGYXPSCCR 673
NGQT KMD EPP+SE + + +I+ IGY P
Sbjct: 130 NGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVP 189
Query: 674 F 676
F
Sbjct: 190 F 190
Score = 103 bits (248), Expect = 9e-23
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVK 264
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 255 MGKGSFKYAWVLDKLKAERE 314
MGKGSFKYAWVLDKLKAERE
Sbjct: 49 MGKGSFKYAWVLDKLKAERE 68
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 149 bits (361), Expect = 2e-36
Identities = 74/121 (61%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 496
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 497 NGQTVXXXXXXXXXXXXXXXXE*TKMDXPEPPYSEPDLRKSRGSIP-YIQXIGYXPSCCR 673
NGQT KMD EPP+SE + + +I+ IGY P
Sbjct: 130 NGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVP 189
Query: 674 F 676
F
Sbjct: 190 F 190
Score = 103 bits (248), Expect = 9e-23
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVK 264
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 255 MGKGSFKYAWVLDKLKAERE 314
MGKGSFKYAWVLDKLKAERE
Sbjct: 49 MGKGSFKYAWVLDKLKAERE 68
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 133 bits (322), Expect = 1e-31
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 496
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISK 129
Query: 497 NGQT 508
NGQT
Sbjct: 130 NGQT 133
Score = 103 bits (248), Expect = 9e-23
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVK 264
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 255 MGKGSFKYAWVLDKLKAERE 314
MGKGSFKYAWVLDKLKAERE
Sbjct: 49 MGKGSFKYAWVLDKLKAERE 68
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 508 REHALLAFTLGVKQLI 555
REHALLA TLGVKQL+
Sbjct: 134 REHALLAQTLGVKQLV 149
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 103 bits (248), Expect = 9e-23
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVK 264
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 102 bits (244), Expect(2) = 7e-25
Identities = 45/48 (93%), Positives = 48/48 (100%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 460
GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 255 MGKGSFKYAWVLDKLKAERE 314
MGKGSFKYAWVLDKLKAERE
Sbjct: 49 MGKGSFKYAWVLDKLKAERE 68
Score = 29.5 bits (63), Expect(2) = 7e-25
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 569 KMDXPEPPYSEPDLRKSRGSIP-YIQXIGYXPSCCRF 676
KMD EPP+SE + + +I+ IGY P F
Sbjct: 120 KMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPF 156
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 103 bits (248), Expect = 9e-23
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVK 264
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 255 MGKGSFKYAWVLDKLKAER 311
MGKGSFKYAWVLDKLK +
Sbjct: 49 MGKGSFKYAWVLDKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 88.2 bits (209), Expect = 5e-18
Identities = 39/64 (60%), Positives = 47/64 (73%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 496
G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 233 GVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFEN 292
Query: 497 NGQT 508
GQT
Sbjct: 293 GGQT 296
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +1
Query: 121 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA 249
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEA 209
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 258 GKGSFKYAWVLDKLKAERE 314
GK SF YAWVLD+ + ERE
Sbjct: 213 GKASFAYAWVLDETEEERE 231
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1
Query: 508 REHALLAFTLGVKQLIVXVNQ 570
+EHALL +LGV QLIV VN+
Sbjct: 297 KEHALLLRSLGVTQLIVAVNK 317
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 88.2 bits (209), Expect = 5e-18
Identities = 39/64 (60%), Positives = 47/64 (73%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 496
G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 251 GVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFEN 310
Query: 497 NGQT 508
GQT
Sbjct: 311 GGQT 314
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +1
Query: 121 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA 249
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEA 227
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 258 GKGSFKYAWVLDKLKAERE 314
GK SF YAWVLD+ + ERE
Sbjct: 231 GKASFAYAWVLDETEEERE 249
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1
Query: 508 REHALLAFTLGVKQLIVXVNQ 570
+EHALL +LGV QLIV VN+
Sbjct: 315 KEHALLLRSLGVTQLIVAVNK 335
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 87.0 bits (206), Expect = 1e-17
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 496
G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G +
Sbjct: 172 GKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDR 231
Query: 497 NGQTVXXXXXXXXXXXXXXXXE*TKMDXPEPPYSEPDLRKSRGSI-PYIQXIGYXP 661
GQT KMD P + E ++ G + P+++ +G+ P
Sbjct: 232 GGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNP 287
Score = 64.9 bits (151), Expect = 5e-11
Identities = 27/47 (57%), Positives = 37/47 (78%)
Frame = +1
Query: 115 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE 255
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKE 150
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 97 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG 148
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 118 KEKTHINIVVIGHVDSGKSTTT 183
++K H+N+ IGHVD GK+T T
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLT 66
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 98 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG 149
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 118 KEKTHINIVVIGHVDSGKSTTT 183
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 98 GITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDG 149
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 118 KEKTHINIVVIGHVDSGKSTTT 183
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 481
GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME 147
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 124 KTHINIVVIGHVDSGKSTTT 183
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 481
GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME 147
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 124 KTHINIVVIGHVDSGKSTTT 183
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 317 GITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
GIT I + E +K VT +D PGH F G AD VL+VAA G
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDG 240
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.084
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 136 NIVVIGHVDSGKSTTTGHLIYKCGGI 213
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
GIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 75 GITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
GIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 87 GITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 136 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQEWV 261
N ++ HVD GKST L+ CG + K+ ++K + E + +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERERGI 88
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 136 NIVVIGHVDSGKSTTTGHLIYKCGGID 216
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +2
Query: 317 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
GITI A + + IID PGH DF + D AVL++ G G
Sbjct: 97 GITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 207
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 323 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 207
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 323 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 136 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKDPSNMLGYWTN 297
+I+ GH+D S GH +K GI E FE E ++ + P+ GY T+
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATS 1685
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 326 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 189 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 326 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 64 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 365 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 460
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 374 IIDAPGHRDFIKNMITGTSQADCAVLIV 457
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AC024791-38|AAY55888.1| 246|Caenorhabditis elegans Hypothetical
protein Y47G6A.32 protein.
Length = 246
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 451 EHS-AISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDCDTXSRSAFSLSNTQAY 275
EH ++++ CD V E S +D N +L S E PE + + S+ LS
Sbjct: 104 EHGDSVAVNPHCDGVTFEGITSTDFDDSNCLLVSCE-PECQFNGPSTQHSSGVLSVLIHR 162
Query: 274 LKDPLPIPGPPSRTSRWYV 218
+++ P PS T Y+
Sbjct: 163 IRNETTTPPTPSTTKSSYI 181
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 133 INIVVIGHVDSGKSTTT 183
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 368 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 472
+ +ID PGH I+ ++ ++ D A++I+ G
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAG 108
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 133 INIVVIGHVDSGKSTTT 183
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 368 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 463
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 126 LFLAHFWLVELWVY*XHFFTSQNNIFLTLTTDYKLRVISL 7
+F F ++ + V HF SQ+N+ L LT D + + S+
Sbjct: 13 IFYVLFLIIPIKVTSIHFVDSQHNVILILTDDQDIELGSM 52
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 106 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 198
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 106 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 198
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 368 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 457
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 368 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 457
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 106 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEWVKD 267
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 106 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEWVKD 267
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain plus
rrm motif protein1 protein.
Length = 367
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -3
Query: 412 VLDEISVSRSINDGNIVLASFELPESNIDCDTXSRSAFSLSNTQAYLKDPLPIPGPPSRT 233
V D V +++NDGN++ +F L ++ S + ++ Q + P GP +
Sbjct: 63 VADADEVRKNLNDGNLIGENFTLKVTDHKNVGGSLLPMASNSVQKLVSSPPSKSGPVLLS 122
Query: 232 SRW 224
S W
Sbjct: 123 SSW 125
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 106 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEWVKD 267
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein.
Length = 367
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -3
Query: 412 VLDEISVSRSINDGNIVLASFELPESNIDCDTXSRSAFSLSNTQAYLKDPLPIPGPPSRT 233
V D V +++NDGN++ +F L ++ S + ++ Q + P GP +
Sbjct: 63 VADADEVRKNLNDGNLIGENFTLKVTDHKNVGGSLLPMASNSVQKLVSSPPSKSGPVLLS 122
Query: 232 SRW 224
S W
Sbjct: 123 SSW 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,946,522
Number of Sequences: 27780
Number of extensions: 285831
Number of successful extensions: 956
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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