Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060146.seq
         (511 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   0.45 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   0.45 
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    25   0.60 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   2.4  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   2.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   2.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   4.2  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   7.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.4  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   9.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.8  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +1

Query: 109 YYLYGA*YYFSFSYIRN 159
           YY YGA + F+F++I+N
Sbjct: 297 YYDYGADFPFNFAFIKN 313


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +1

Query: 109 YYLYGA*YYFSFSYIRN 159
           YY YGA + F+F++I+N
Sbjct: 297 YYDYGADFPFNFAFIKN 313


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 24.6 bits (51), Expect = 0.60
 Identities = 17/57 (29%), Positives = 26/57 (45%)
 Frame = -2

Query: 477 QSPWASRSCPRLCSRLISS*VSCARRSGVIXXGALTDSPNEDGFDSXVFTPGLVLGL 307
           +SP  S +CP    +L+S  + C  +  +       D   E+G  S    PGLV G+
Sbjct: 56  KSPLLSCACPDGL-KLLSDGLMCVEKDSIHSI----DGDEENGLTSESTDPGLVAGI 107


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 71  YCNLKTNXIFFSCI 112
           YCN KTN   +SC+
Sbjct: 218 YCNSKTNTGEYSCL 231


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 71  YCNLKTNXIFFSCI 112
           YCN KTN   +SC+
Sbjct: 218 YCNSKTNTGEYSCL 231


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = -2

Query: 333 FTPGLVLGLAANGEHLLLFVGNCALDSN 250
           + PG++ G     +  +L   +C +D N
Sbjct: 182 YEPGMICGATIISKRYVLTAAHCIIDEN 209


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 483 MQQSPWASRSCPRLCSRL 430
           M Q   A  +C RLC+RL
Sbjct: 237 MHQQIMARYNCERLCNRL 254


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 369 DSPNEDGFDSXVFTPGLVLGL 307
           D   E+G  S    PGLV G+
Sbjct: 116 DGDEENGLTSESTDPGLVAGI 136


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = +2

Query: 302 AASPSTSPGVKTSES--KPSSFGESVSAPXXITPERLAQETYDEIKRL 439
           + SPS   G  +S S   PSSF  SVS      P  L  E Y  I  L
Sbjct: 78  STSPSYPGGGSSSPSPSSPSSFFSSVS------PTSLGSENYTGISDL 119


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = -1

Query: 505 IHLMMEHDAAEPVGQPQLSTSMQSFNLIISLLCQAFXGN 389
           I  M++H+   P+G+ Q      +F   +  L + F  N
Sbjct: 368 IEKMVDHETMVPLGERQTLMFSATFPDEVQHLARRFLNN 406


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 166 CFNXEYKKMKNNI 128
           C N EY+ MK+N+
Sbjct: 206 CSNQEYEIMKDNL 218


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,300
Number of Sequences: 438
Number of extensions: 2616
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)