Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060145.seq
         (677 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    37   7e-04
EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           26   0.95 
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    24   3.8  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   8.9  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 36.7 bits (81), Expect = 7e-04
 Identities = 15/26 (57%), Positives = 21/26 (80%)
 Frame = +2

Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHI 586
           G++L+  AQTGSGKT A++LP I H+
Sbjct: 211 GRDLMACAQTGSGKTAAFMLPMIHHL 236



 Score = 35.5 bits (78), Expect = 0.002
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +3

Query: 360 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++ R
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGR 212



 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 622 PIALVLAPTRELAQQI 669
           P  +++APTRELA QI
Sbjct: 250 PYIVIVAPTRELAIQI 265


>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 113 TVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKNSLE 232
           T++ +L+E   S +  LDL    +D  +L +L    +SLE
Sbjct: 140 TMLRDLDEGCRSRVQYLDLKLNEIDTVNLAELAASSDSLE 179


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 512 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGS 622
           K L   AQ  + ++   I  A+V +  Q  +RR DG+
Sbjct: 457 KTLNYKAQKAAARSHVKIFKALVRLRKQRTLRRNDGN 493


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 312 VLKRSPYEVEEYRNNHEVTVSGVEVHNPIQY 404
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,041
Number of Sequences: 2352
Number of extensions: 13480
Number of successful extensions: 38
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)