Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060145.seq
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 64 1e-10
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 58 8e-09
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 52 4e-07
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 48 6e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 43 2e-04
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 43 2e-04
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 43 2e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 41 7e-04
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 41 0.001
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 39 0.004
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 38 0.005
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 36 0.020
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 34 0.11
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 33 0.14
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 33 0.14
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 33 0.14
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 33 0.14
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 33 0.19
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 33 0.19
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 33 0.19
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 33 0.19
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 33 0.19
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 33 0.25
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 33 0.25
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 33 0.25
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 32 0.33
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 32 0.33
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 32 0.33
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 31 0.57
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 31 0.57
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 31 0.57
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 31 0.76
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 31 0.76
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 31 0.76
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 31 0.76
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 30 1.7
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 30 1.7
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 30 1.7
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 30 1.7
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 4.0
U21317-6|AAA62527.1| 313|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 5.3
AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine r... 28 7.0
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 28 7.0
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 28 7.0
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr... 27 9.3
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 27 9.3
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 27 9.3
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 27 9.3
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/87 (34%), Positives = 51/87 (58%)
Frame = +3
Query: 255 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYV 434
W + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P +
Sbjct: 82 WSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQI 141
Query: 435 QQGVKTMGYKEPTPIQAQGWPIAMSER 515
+ + +++PT IQ+ WPIAMS R
Sbjct: 142 HE-LLYGKFQKPTVIQSISWPIAMSGR 167
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/41 (51%), Positives = 33/41 (80%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGSRLL 631
G++++ +A+TGSGKTLA++LPA+VHI Q +RG+G +L
Sbjct: 166 GRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVL 206
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 583 HKQPTAYSER*WVPIALVLAPTRELAQQIQQ 675
H A+ +R P LVL PTRELAQQ+Q+
Sbjct: 190 HITKQAHRQRGEGPAVLVLLPTRELAQQVQE 220
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = +3
Query: 345 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + R
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNR 339
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/33 (48%), Positives = 26/33 (78%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 610
++++GVA+TGSGKT A++LP +V I + P + R
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMER 371
Score = 31.9 bits (69), Expect = 0.43
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +1
Query: 622 PIALVLAPTRELAQQIQQ 675
P A+++APTRELAQQI++
Sbjct: 379 PYAIIMAPTRELAQQIEE 396
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 57.6 bits (133), Expect = 8e-09
Identities = 26/84 (30%), Positives = 44/84 (52%)
Frame = +3
Query: 264 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 443
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 444 VKTMGYKEPTPIQAQGWPIAMSER 515
++ Y++PTPIQA P A+S R
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGR 303
Score = 54.0 bits (124), Expect = 9e-08
Identities = 21/37 (56%), Positives = 32/37 (86%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 619
G++++G+A+TGSGKT AY+ PAIVHI +QP ++ G+G
Sbjct: 302 GRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEG 338
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 52.0 bits (119), Expect = 4e-07
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 619
G++++G+A+TGSGKTLA++LP HI +QP + GDG
Sbjct: 341 GRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDG 377
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 264 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 440
V + F KNFY + + + EV+ YR + +TV G++ PI+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 441 GVKTMGYKEPTPIQAQGWPIAMSER 515
+K Y +PT IQAQ P MS R
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGR 342
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 622 PIALVLAPTRELAQQ 666
PIA++LAPTRELA Q
Sbjct: 378 PIAVILAPTRELAMQ 392
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/50 (42%), Positives = 33/50 (66%)
Frame = +2
Query: 446 KDNGLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQ 595
+ NG ++ S G++ +GV+QTGSGKTLA++LPA++HI+ Q
Sbjct: 100 RKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQ 149
Score = 35.9 bits (79), Expect = 0.027
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Frame = +3
Query: 270 LQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEANFPD 428
++P ++ Y SP +++E Y N + V S V++ P+ FE+A +
Sbjct: 33 MKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAFGSN 92
Query: 429 YVQQG-VKTMGYKEPTPIQAQGWPIAMS 509
G ++ G+++P+PIQ+Q WP+ +S
Sbjct: 93 ASIMGEIRKNGFEKPSPIQSQMWPLLLS 120
Score = 30.7 bits (66), Expect = 1.00
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 622 PIALVLAPTRELAQQIQ 672
P LVL+PTRELAQQI+
Sbjct: 164 PFVLVLSPTRELAQQIE 180
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 354 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 177
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHI 586
++L+ AQTGSGKT A++LP I HI
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHI 201
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +1
Query: 589 QPTAYSE--R*WVPIALVLAPTRELAQQIQQ 675
+P A++ R + P ALVL+PTRELA QI +
Sbjct: 210 KPPAFTNGRRTYYPCALVLSPTRELAIQIHK 240
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 354 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 161
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHI 586
++L+ AQTGSGKT A++LP I HI
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHI 185
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +1
Query: 589 QPTAYSE--R*WVPIALVLAPTRELAQQIQQ 675
+P A++ R + P ALVL+PTRELA QI +
Sbjct: 194 KPPAFTNGRRTYYPCALVLSPTRELAIQIHK 224
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 354 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 158
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHI 586
++L+ AQTGSGKT A++LP I HI
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHI 182
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +1
Query: 589 QPTAYSE--R*WVPIALVLAPTRELAQQIQQ 675
+P A++ R + P ALVL+PTRELA QI +
Sbjct: 191 KPPAFTNGRRTYYPCALVLSPTRELAIQIHK 221
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 363 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
V +G +V PI F + + +++++ +KT GY PTP+Q P R
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGR 204
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQPP 601
G++L+ AQTGSGKT A+++P + I P
Sbjct: 203 GRDLMSCAQTGSGKTAAFLVPLVNAILQDGP 233
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 446 KDNGLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAI 577
KDN + +A S G ++VG A+TGSGKTLA ++P +
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVL 135
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 446 KDNGLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGD 616
K G+ A + + G++++G+A TGSGKT+ ++LP ++ Q P R +
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSE 265
Query: 617 G 619
G
Sbjct: 266 G 266
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +2
Query: 443 CKDNGLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQP 598
C+ G + + L + GK+++G+A+TGSGKT A+ +P + + + P
Sbjct: 59 CQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP 110
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI 577
GK+++ A+TGSGKTLA++LPAI
Sbjct: 105 GKDVLASAKTGSGKTLAFLLPAI 127
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +2
Query: 455 GLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAI 577
G ++ + S ++ + KN++G A+TGSGKT A+++P +
Sbjct: 108 GWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLV 148
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILP 571
GK+++ AQTGSGKT A++LP
Sbjct: 335 GKDILACAQTGSGKTAAFLLP 355
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
P + F +++ P +++ V+ GY TPIQ P+
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPL 331
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 470 DAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPA 574
D Y++ + +D +V K +V VAQ TLA I+ A
Sbjct: 551 DTYTTEKNSDVFVKKTIVFVAQQKMADTLASIMSA 585
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHI 586
G ++V A TGSGKTLA+++P ++ +
Sbjct: 773 GNDVVACAHTGSGKTLAFLIPFVIKL 798
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHI 586
G ++V A TGSGKTLA+++P ++ +
Sbjct: 773 GNDVVACAHTGSGKTLAFLIPFVIKL 798
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILP 571
GK+++ AQTGSGKT A++LP
Sbjct: 335 GKDILACAQTGSGKTAAFLLP 355
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
P + F +++ P +++ V+ GY TPIQ P+
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPL 331
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 470 DAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPA 574
D Y++ + +D +V K +V VAQ TLA I+ A
Sbjct: 551 DTYTTEKNSDVFVKKTIVFVAQQKMADTLASIMSA 585
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 455 GLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG 619
G +T L + G +++ AQTGSGKT A++LP + + ++ + G+G
Sbjct: 571 GYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEG 626
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
F EAN + +++ V GY + TPIQ P+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPL 585
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 455 GLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG 619
G +T L + G +++ AQTGSGKT A++LP + + ++ + G+G
Sbjct: 571 GYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEG 626
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
F EAN + +++ V GY + TPIQ P+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPL 585
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQP 598
G +++G A+TG+GKTLA+ +P + ++ P
Sbjct: 126 GSDILGCARTGTGKTLAFAIPILQKLSVDP 155
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAIVHINNQP 598
G +++G A+TG+GKTLA+ +P + ++ P
Sbjct: 126 GSDILGCARTGTGKTLAFAIPILQKLSVDP 155
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 455 GLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDG 619
G +T L + G +++ AQTGSGKT A++LP + + ++ + G+G
Sbjct: 571 GYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEG 626
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
F EAN + +++ V GY + TPIQ P+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPL 585
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 455 GLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHI 586
G +T L + G +++ AQTGSGKT A++LP + +
Sbjct: 360 GYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRL 403
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
P + F EAN + +Q+ V GY + TPIQ P+
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPL 374
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 470 DAYSSSRLADSYVGKNLVGVAQTGSGKTLAYIL 568
D+Y++ + A+ Y K +V V+Q TLA IL
Sbjct: 594 DSYTTEKSAEVYTKKTMVFVSQRAMADTLASIL 626
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 455 GLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHI 586
G +T L + G +++ AQTGSGKT A++LP + +
Sbjct: 360 GYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRL 403
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
P + F EAN + +Q+ V GY + TPIQ P+
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPL 374
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 455 GLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHI 586
G +T L + G +++ AQTGSGKT A++LP + +
Sbjct: 360 GYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRL 403
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
P + F EAN + +Q+ V GY + TPIQ P+
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPL 374
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 470 DAYSSSRLADSYVGKNLVGVAQTGSGKTLAYIL 568
D+Y++ + A+ Y K +V V+Q TLA IL
Sbjct: 594 DSYTTEKSAEVYTKKTMVFVSQRAMADTLASIL 626
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 476 YSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQ 595
Y + + GKN V VA TGSGKT I A+ HI +
Sbjct: 374 YQEELVQPALEGKNCVIVAPTGSGKTEVAIYAALKHIEER 413
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 440 RCKDNGLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHI 586
R +N +++ + +N++ A TGSGKTLA+ LP I I
Sbjct: 140 RLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEI 188
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 32.3 bits (70), Expect = 0.33
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI 577
GK++V +++TGSGKT A+++P +
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPML 83
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 32.3 bits (70), Expect = 0.33
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI 577
GK++V +++TGSGKT A+++P +
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPML 83
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 31.9 bits (69), Expect = 0.43
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 530 AQTGSGKTLAYILPAIVHINNQP 598
A TGSGKT+ Y+LP + + ++P
Sbjct: 163 APTGSGKTICYVLPVLAAVGSKP 185
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 31.5 bits (68), Expect = 0.57
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +2
Query: 107 VETVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKNSLEVRTCVAQMGFCFTPTFQQ 286
+ETV+ LE N +RL+ A VA E LE + GK N + A F T +
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLNPKFLARLTASGRFMETGYANE 130
Query: 287 KL 292
K+
Sbjct: 131 KI 132
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 622 PIALVLAPTRELAQQIQQ 675
P+AL+LAPTRELA QI +
Sbjct: 460 PLALILAPTRELAAQIHE 477
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +2
Query: 455 GLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQPP 601
G ++ A + GK+++ AQ+G+GKT + + + I+++ P
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDP 96
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1
Query: 628 ALVLAPTRELAQQIQQ 675
ALV+APTRELAQQIQ+
Sbjct: 100 ALVMAPTRELAQQIQK 115
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +2
Query: 455 GLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQPP 601
G ++ A + GK+++ AQ+G+GKT + + + I+++ P
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDP 96
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1
Query: 628 ALVLAPTRELAQQIQQ 675
ALV+APTRELAQQIQ+
Sbjct: 100 ALVMAPTRELAQQIQK 115
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHI 586
++++G A+TGSGKTLA+ +P + +
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARL 51
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +2
Query: 512 KNLVGVAQTGSGKTLAYILPAIVHI 586
++++G A+TGSGKTLA+ +P + +
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARL 218
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 423 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
P+ V + ++ MG+ EPT IQ+ P A+ +R
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDR 193
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 443 CKDNGLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQP 598
C G + + + GK++ A TG+GKT A++LP + + +P
Sbjct: 163 CSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRP 214
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 509
FE+ N + + GY +PTPIQ P+A++
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALT 184
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 31.1 bits (67), Expect = 0.76
Identities = 22/84 (26%), Positives = 40/84 (47%)
Frame = -1
Query: 536 FELRQLNSFRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLV 357
F++R+ FR S+RP + +R+ F+ L L+H+ I + +M +L
Sbjct: 217 FKVRR--QFRKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLT 269
Query: 356 IISVLFDFIW*SFENCRMWIIKVF 285
IIS ++W + C + I +F
Sbjct: 270 IIS---QYLWQLAQGCPVIIYLIF 290
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI 577
G+ LV A TG GKT A+++PAI
Sbjct: 30 GRGLVVEAPTGIGKTYAFLIPAI 52
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 509 GKNLVGVAQTGSGKTLAYILPAI 577
G+ LV A TG GKT A+++PAI
Sbjct: 130 GRGLVVEAPTGIGKTYAFLIPAI 152
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = -1
Query: 512 FRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFD 336
+R +YR N + + + Y + +I + F + + ++NLN T +L I+++F+
Sbjct: 28 YRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = -1
Query: 512 FRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFD 336
+R +YR N + + + Y + +I + F + + ++NLN T +L I+++F+
Sbjct: 28 YRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 536 TGSGKTLAYILPAIVH 583
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 515 NLVGVAQTGSGKTLAYILPAIVHINN 592
++V + TGSGKTLA++LP + I N
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQN 73
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 515 NLVGVAQTGSGKTLAYILPAIVHIN 589
NL+ AQ+G+GKT A++L + I+
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRID 274
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 515 NLVGVAQTGSGKTLAYILPAIVHIN 589
NL+ AQ+G+GKT A++L + I+
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRID 299
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 515 NLVGVAQTGSGKTLAYILPAIVHIN 589
NL+ AQ+G+GKT A++L + I+
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRID 683
>U21317-6|AAA62527.1| 313|Caenorhabditis elegans Hypothetical
protein B0495.8a protein.
Length = 313
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 443 CKDNGLQRTDAYSSSRLADSYVGKNLVGVAQT 538
C+D G Q SR+AD Y GK +G+ +T
Sbjct: 191 CEDCGAQLNITDHESRIADHYNGKMHIGMVET 222
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 159 RIIAEFVASSKFGTTVSTAIIPV 91
++I +FVA S G T+STA P+
Sbjct: 221 QLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 159 RIIAEFVASSKFGTTVSTAIIPV 91
++I +FVA S G T+STA P+
Sbjct: 130 QLIGDFVAGSLLGATISTAFFPL 152
>AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 12 protein.
Length = 341
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -2
Query: 235 DLQRILFSHQILQILQIYCHRCQIETN-YR-RICCL 134
D +S I QI+ +CH+ +++TN +R RI CL
Sbjct: 268 DASIFFYSFAIPQIMTCFCHKWKVQTNTFRIRIGCL 303
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 628 ALVLAPTRELAQQIQQ 675
AL+L+PTRELA QIQ+
Sbjct: 97 ALILSPTRELAVQIQK 112
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 628 ALVLAPTRELAQQIQQ 675
AL+L+PTRELA QIQ+
Sbjct: 97 ALILSPTRELAVQIQK 112
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 300 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 458
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 300 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 458
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 316 RTVGCGS*KFLLKGWSETESHLGDACSDLQRILFSHQILQILQIYCHRCQ 167
RTV + L+ G+ E S L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 316 RTVGCGS*KFLLKGWSETESHLGDACSDLQRILFSHQILQILQIYCHRCQ 167
RTV + L+ G+ E S L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 316 RTVGCGS*KFLLKGWSETESHLGDACSDLQRILFSHQILQILQIYCHRCQ 167
RTV + L+ G+ E S L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 316 RTVGCGS*KFLLKGWSETESHLGDACSDLQRILFSHQILQILQIYCHRCQ 167
RTV + L+ G+ E S L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical
protein T21C9.6 protein.
Length = 1215
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 255 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPI 398
+ + L+ FN+ Y+ PT L + +E+YR + + G+ NP+
Sbjct: 165 YSNALLKSFNE-IYNDKPTALIENLKTIEKYRKGNVLNQMGLRHRNPL 211
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 455 GLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHIN 589
G ++ A S +A GK++ +Q GSGKT+ ++ + I+
Sbjct: 15 GFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGID 59
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/52 (21%), Positives = 31/52 (59%)
Frame = +2
Query: 440 RCKDNGLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQ 595
R K++ R + + +G++++ A++G+GKTL + + A+ +++++
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSR 87
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/52 (21%), Positives = 31/52 (59%)
Frame = +2
Query: 440 RCKDNGLQRTDAYSSSRLADSYVGKNLVGVAQTGSGKTLAYILPAIVHINNQ 595
R K++ R + + +G++++ A++G+GKTL + + A+ +++++
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSR 87
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,501,359
Number of Sequences: 27780
Number of extensions: 303693
Number of successful extensions: 999
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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