Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060144.seq
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   5.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   5.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   6.9  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = +3

Query: 249 HRILCEYLSSCNNETTKNTIFLSLFGGMESQRRLKVLSILASMAVSASSTPVLLAV 416
           HR L ++  +  +  T++ + +S+      Q  + V SIL   +  A++T ++L V
Sbjct: 23  HRNLLDWSKTSLDNATEHKLPISMRFNEGHQLSIIVYSILMVFSAIANTTVLVLIV 78


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = +3

Query: 249 HRILCEYLSSCNNETTKNTIFLSLFGGMESQRRLKVLSILASMAVSASSTPVLLAV 416
           HR L ++  +  +  T++ + +S+      Q  + V SIL   +  A++T ++L V
Sbjct: 23  HRNLLDWSKTSLDNATEHKLPISMRFNEGHQLSIIVYSILMVFSAIANTTVLVLIV 78


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = -1

Query: 356 YLQSSLTFHTTKQRQEYCILCSLIIARGQIF 264
           YL ++LT++ T ++  +  +C L ++   IF
Sbjct: 41  YLLTNLTYNNTNRKYYWLNVCCLNLSIVTIF 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,238
Number of Sequences: 336
Number of extensions: 3122
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)