Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060144.seq
         (671 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    25   2.9  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    24   5.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   5.0  

>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +1

Query: 49  LRKYEFPVCAQEALVRIEQLLAGRTAPTSKQLVVAMEIISEFIFCE 186
           +RK  F  C  E +VR+++    + A   K  +V   +   +  CE
Sbjct: 139 VRKIPFEDCLDEEVVRVQEYFKRKRAKAKKANLVQATVGKVYERCE 184


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 505 QKPERTPNAGKYCSSIY 555
           Q PER P  G Y + IY
Sbjct: 256 QTPERNPKEGDYTAPIY 272


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 15/55 (27%), Positives = 23/55 (41%)
 Frame = +3

Query: 198 RRQRTGGRPQFIARTTTHRILCEYLSSCNNETTKNTIFLSLFGGMESQRRLKVLS 362
           R++  GG         T   LC  L  CNN      +++ L+    SQR  + +S
Sbjct: 521 RKRFAGGGHSHHRSNDTTDALCG-LIFCNNRAMARILYVLLYEVSRSQREFEFIS 574


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,616
Number of Sequences: 2352
Number of extensions: 14082
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)