Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060144.seq
         (671 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK056149-1|BAB71104.1|  449|Homo sapiens protein ( Homo sapiens ...    44   5e-04
BC005121-1|AAH05121.1|  352|Homo sapiens C7orf26 protein protein.      36   0.100
BC001076-1|AAH01076.1|  352|Homo sapiens C7orf26 protein protein.      36   0.100

>AK056149-1|BAB71104.1|  449|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31587 fis, clone NT2RI2002243. ).
          Length = 449

 Score = 44.0 bits (99), Expect = 5e-04
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
 Frame = +3

Query: 255 ILCEYLSSCNNETTKNTIFLSLF---GGMESQRRLKVLSILASMAVSASSTPVLLAVGVW 425
           I+C Y      ++ +  IF SLF   G      R+ +L  L SMAV+    PVL     W
Sbjct: 77  IMCNYFQEQTKDSVRQIIFSSLFSPQGNKADDSRMSLLGKLVSMAVAVCRIPVLECAASW 136

Query: 426 LQQTGCSSPQSLQLAENLIRDH 491
           LQ+T       ++LA+ L+ D+
Sbjct: 137 LQRT--PVVYCVRLAKALVDDY 156



 Score = 34.3 bits (75), Expect = 0.40
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +1

Query: 28  LSDLKHSLRKYEFPVCAQEALVRIEQLLAGRTAPTSKQLVVA--MEIISEFIFCESXXXX 201
           +SD++HSL + +    A+E L  ++   + +       +V    +E++ EF+F       
Sbjct: 1   MSDIRHSLLRRDALSAAKEVLYHLDIYFSSQLQSAPLPIVDKGPVELLEEFVF--QVPKE 58

Query: 202 XXXXXXXLSSLQELQLIEFYVN 267
                  L+SLQELQL+E   N
Sbjct: 59  RSAQPKRLNSLQELQLLEIMCN 80



 Score = 33.1 bits (72), Expect = 0.93
 Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
 Frame = +2

Query: 521 LRMLANTAPQFISNFITAVTELYVHDLSTKKM-PPKNLLXVI 643
           L+ + + +P+F   FIT+VT LY  DLS+  + PP +LL +I
Sbjct: 167 LKQIFSASPRFCCQFITSVTALY--DLSSDDLIPPMDLLEMI 206


>BC005121-1|AAH05121.1|  352|Homo sapiens C7orf26 protein protein.
          Length = 352

 Score = 36.3 bits (80), Expect = 0.100
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
 Frame = +3

Query: 288 ETTKNTIFLSLF---GGMESQRRLKVLSILASMAVSASSTPVLLAVGVWLQQTGCSSPQS 458
           ++ +  IF SLF   G      R+ +L  L SMAV+    PVL     WLQ+T       
Sbjct: 69  DSVRQIIFSSLFSPQGNKADDSRMSLLGKLVSMAVAVCRIPVLECAASWLQRT--PVVYC 126

Query: 459 LQLAENLIRDH 491
           ++LA+ L+ D+
Sbjct: 127 VRLAKALVDDY 137



 Score = 33.1 bits (72), Expect = 0.93
 Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
 Frame = +2

Query: 521 LRMLANTAPQFISNFITAVTELYVHDLSTKKM-PPKNLLXVI 643
           L+ + + +P+F   FIT+VT LY  DLS+  + PP +LL +I
Sbjct: 148 LKQIFSASPRFCCQFITSVTALY--DLSSDDLIPPMDLLEMI 187


>BC001076-1|AAH01076.1|  352|Homo sapiens C7orf26 protein protein.
          Length = 352

 Score = 36.3 bits (80), Expect = 0.100
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
 Frame = +3

Query: 288 ETTKNTIFLSLF---GGMESQRRLKVLSILASMAVSASSTPVLLAVGVWLQQTGCSSPQS 458
           ++ +  IF SLF   G      R+ +L  L SMAV+    PVL     WLQ+T       
Sbjct: 69  DSVRQIIFSSLFSPQGNKADDSRMSLLGKLVSMAVAVCRIPVLECAASWLQRT--PVVYC 126

Query: 459 LQLAENLIRDH 491
           ++LA+ L+ D+
Sbjct: 127 VRLAKALVDDY 137



 Score = 33.1 bits (72), Expect = 0.93
 Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
 Frame = +2

Query: 521 LRMLANTAPQFISNFITAVTELYVHDLSTKKM-PPKNLLXVI 643
           L+ + + +P+F   FIT+VT LY  DLS+  + PP +LL +I
Sbjct: 148 LKQIFSASPRFCCQFITSVTALY--DLSSDDLIPPMDLLEMI 187


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,427,175
Number of Sequences: 237096
Number of extensions: 1878764
Number of successful extensions: 5028
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5026
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)