Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060144.seq
         (671 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    25   0.87 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    25   0.87 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.87 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.6  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.1  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +2

Query: 473 ESYP*SLLP*YKNQKELRMLANTAPQFISNFITAVTELYVHD 598
           E YP ++    +  K +R     +P F S+ +   + L+VHD
Sbjct: 448 EGYPHAVPKYIQRLKAIRATLKASPFFASHEVVGSSLLFVHD 489


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +2

Query: 473 ESYP*SLLP*YKNQKELRMLANTAPQFISNFITAVTELYVHD 598
           E YP ++    +  K +R     +P F S+ +   + L+VHD
Sbjct: 363 EGYPHAVPKYIQRLKAIRATLKASPFFASHEVVGSSLLFVHD 404


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +2

Query: 473 ESYP*SLLP*YKNQKELRMLANTAPQFISNFITAVTELYVHD 598
           E YP ++    +  K +R     +P F S+ +   + L+VHD
Sbjct: 682 EGYPHAVPKYIQRLKAIRATLKASPFFASHEVVGSSLLFVHD 723


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = -1

Query: 161 ISIATTNCLLVGAVRPANNCSILTRAS*AHTGNSYFL 51
           I++      + G V   + C ++ R    HT  +Y+L
Sbjct: 56  ITVIYAVIFVTGLVGNVSTCVVIARNKSMHTATNYYL 92


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = +1

Query: 475 ILSVITSTLIQKPERTPN 528
           ++S+ITS+ +++P + PN
Sbjct: 500 LMSLITSSEVRQPGKAPN 517


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 478 RFSASCRDCGDEQPVCWSQTPTASNTGV 395
           R      D G  +P C    PT+ NTG+
Sbjct: 84  RMIQDAEDKGLLKPGCTIIEPTSGNTGI 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,465
Number of Sequences: 438
Number of extensions: 3723
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)