Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060142.seq
         (681 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    26   1.3  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    23   6.7  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   8.9  
AF513638-1|AAM53610.1|  210|Anopheles gambiae glutathione S-tran...    23   8.9  

>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +1

Query: 88  HQAIAFRCIGDSLYSQNEQDFISRMNPQKDLQDLMEESSDYW 213
           H  + F  I  S+Y   + + + ++NPQ  +  L++     W
Sbjct: 21  HLGLEFNHIVTSIYDPADFEVLKKVNPQHTIPTLVDNGHILW 62


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 433 PVPSCDSLKCHSISTWIXGAEACP 504
           PVP CD  + H  +T   G    P
Sbjct: 386 PVPRCDEQRPHKATTCTEGKSLVP 409


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 252 YIVGSPSIEMQEKMAEEEKRRIEDQR 329
           Y  G P+ E+ E+  E  K++ ++QR
Sbjct: 284 YKRGKPNAELLEEAVEALKKKYQEQR 309


>AF513638-1|AAM53610.1|  210|Anopheles gambiae glutathione
           S-transferase D3 protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 7/31 (22%), Positives = 18/31 (58%)
 Frame = +1

Query: 121 SLYSQNEQDFISRMNPQKDLQDLMEESSDYW 213
           +++   E+D ++++NPQ  +  L++     W
Sbjct: 32  NIHDPVERDALTKLNPQHTIPTLVDNGHVVW 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,007
Number of Sequences: 2352
Number of extensions: 7967
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)