Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060138.seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    29   0.036
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   3.1  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    22   4.1  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   7.2  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   9.5  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   9.5  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   9.5  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   9.5  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   9.5  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 29.1 bits (62), Expect = 0.036
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 442 TALEGTVCEPTLL-GIKDMGFITRQRFKPKLYLLCWKGRDLVGAAKTGSGKNTS 600
           T+ E +   P LL  +K  G+      +     +   GRDL+  A+TGSGK  +
Sbjct: 158 TSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAA 211


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +2

Query: 149 KTDSNPEPEKDIEALNNEKEAKKRVGQDGDTNG 247
           K   N  P     +L   K +K+    +GDTNG
Sbjct: 57  KNPPNLNPAVQGSSLTEGKRSKRSKRPNGDTNG 89


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -1

Query: 593 FFPEPVLAAPTRSLPFQQ-RRYSF 525
           +FPEP    P R LP  Q +R+++
Sbjct: 98  YFPEPEKFDPNRYLPENQAKRHNY 121


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -2

Query: 436 FDLIVYLSRGLIQVNRCSIFFPNHLL 359
           FD++VY+  G       S + P++ +
Sbjct: 112 FDVVVYIHSGAFMTGYGSFYQPDYFI 137


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 242 LCHRLVQLSS*LLFHY 195
           +CHR++   S L  HY
Sbjct: 139 ICHRVLSCKSALQMHY 154


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -2

Query: 436 FDLIVYLSRGLIQVNRCSIFFPNHLL 359
           FD++VY+  G       S + P++ +
Sbjct: 112 FDVVVYIHGGAFMTGYGSFYQPDYFI 137


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -2

Query: 436 FDLIVYLSRGLIQVNRCSIFFPNHLL 359
           FD++VY+  G       S + P++ +
Sbjct: 112 FDVVVYIHGGAFMTGYGSFYQPDYFI 137


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -2

Query: 436 FDLIVYLSRGLIQVNRCSIFFPNHLL 359
           FD++VY+  G       S + P++ +
Sbjct: 112 FDVVVYIHGGAFMTGYGSFYQPDYFI 137


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -2

Query: 436 FDLIVYLSRGLIQVNRCSIFFPNHLL 359
           FD++VY+  G       S + P++ +
Sbjct: 112 FDVVVYIHGGAFMTGYGSFYQPDYFI 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,158
Number of Sequences: 336
Number of extensions: 2080
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)