Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060138.seq
(686 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X98743-1|CAA67295.1| 610|Homo sapiens RNA helicase protein. 48 3e-05
CR457060-1|CAG33341.1| 610|Homo sapiens DDX18 protein. 48 3e-05
BC024739-1|AAH24739.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 48 3e-05
BC003360-1|AAH03360.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 48 3e-05
BC001238-1|AAH01238.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 48 3e-05
AK001467-1|BAA91709.1| 670|Homo sapiens protein ( Homo sapiens ... 48 3e-05
AC009404-1|AAX88947.1| 546|Homo sapiens unknown protein. 48 3e-05
CR457213-1|CAG33494.1| 547|Homo sapiens DDX56 protein. 33 0.72
BC001235-1|AAH01235.1| 547|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 33 0.95
AK222662-1|BAD96382.1| 547|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 33 0.95
AK022774-1|BAB14238.1| 547|Homo sapiens protein ( Homo sapiens ... 33 0.95
AJ131712-1|CAB87992.1| 547|Homo sapiens nucleolar RNA-helicase ... 33 0.95
AF247666-1|AAG36876.1| 547|Homo sapiens DEAD-box RNA helicase p... 33 0.95
U28042-1|AAC50823.1| 875|Homo sapiens protein ( Human DEAD box ... 32 2.2
BC093656-1|AAH93656.1| 875|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 2.2
BC093654-1|AAH93654.1| 875|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 2.2
BC091521-1|AAH91521.1| 875|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 2.2
BC049217-1|AAH49217.1| 745|Homo sapiens DDX10 protein protein. 32 2.2
AB209884-1|BAD93121.1| 845|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 2.2
AB040537-1|BAB18536.1| 875|Homo sapiens RNA helicase protein. 32 2.2
BC066938-1|AAH66938.1| 648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 30 8.9
BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 30 8.9
AJ278110-1|CAB92442.1| 648|Homo sapiens DEAD-box protein protein. 30 8.9
AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein. 30 8.9
AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein. 30 8.9
>X98743-1|CAA67295.1| 610|Homo sapiens RNA helicase protein.
Length = 610
Score = 48.0 bits (109), Expect = 3e-05
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 388 NDLPGSSLCL-GILSDQKFTALEGTVCEPTLLGIKDMGFITRQRFKPKLYLLCWKGRDLV 564
+++P L L G D F +L V E TL IK+MGF + K +GRDL+
Sbjct: 101 SEVPSLPLGLTGAFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLL 160
Query: 565 GAAKTGSGK 591
AAKTGSGK
Sbjct: 161 AAAKTGSGK 169
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +2
Query: 575 KLALGKTLAFLIPGYRPYIQT*NFXPRNGYWSHLLSP 685
K GKTLAFLIP ++ F PRNG +LSP
Sbjct: 164 KTGSGKTLAFLIPAVELIVKL-RFMPRNGTGVLILSP 199
>CR457060-1|CAG33341.1| 610|Homo sapiens DDX18 protein.
Length = 610
Score = 48.0 bits (109), Expect = 3e-05
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 388 NDLPGSSLCL-GILSDQKFTALEGTVCEPTLLGIKDMGFITRQRFKPKLYLLCWKGRDLV 564
+++P L L G D F +L V E TL IK+MGF + K +GRDL+
Sbjct: 101 SEVPSLPLGLTGAFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLL 160
Query: 565 GAAKTGSGK 591
AAKTGSGK
Sbjct: 161 AAAKTGSGK 169
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +2
Query: 575 KLALGKTLAFLIPGYRPYIQT*NFXPRNGYWSHLLSP 685
K GKTLAFLIP ++ F PRNG +LSP
Sbjct: 164 KTGSGKTLAFLIPAVELIVKL-RFMPRNGTGVLILSP 199
>BC024739-1|AAH24739.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18 protein.
Length = 670
Score = 48.0 bits (109), Expect = 3e-05
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 388 NDLPGSSLCL-GILSDQKFTALEGTVCEPTLLGIKDMGFITRQRFKPKLYLLCWKGRDLV 564
+++P L L G D F +L V E TL IK+MGF + K +GRDL+
Sbjct: 161 SEVPSLPLGLTGAFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLL 220
Query: 565 GAAKTGSGK 591
AAKTGSGK
Sbjct: 221 AAAKTGSGK 229
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +2
Query: 575 KLALGKTLAFLIPGYRPYIQT*NFXPRNGYWSHLLSP 685
K GKTLAFLIP ++ F PRNG +LSP
Sbjct: 224 KTGSGKTLAFLIPAVELIVKL-RFMPRNGTGVLILSP 259
>BC003360-1|AAH03360.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18 protein.
Length = 670
Score = 48.0 bits (109), Expect = 3e-05
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 388 NDLPGSSLCL-GILSDQKFTALEGTVCEPTLLGIKDMGFITRQRFKPKLYLLCWKGRDLV 564
+++P L L G D F +L V E TL IK+MGF + K +GRDL+
Sbjct: 161 SEVPSLPLGLTGAFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLL 220
Query: 565 GAAKTGSGK 591
AAKTGSGK
Sbjct: 221 AAAKTGSGK 229
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +2
Query: 575 KLALGKTLAFLIPGYRPYIQT*NFXPRNGYWSHLLSP 685
K GKTLAFLIP ++ F PRNG +LSP
Sbjct: 224 KTGSGKTLAFLIPAVELIVKL-RFMPRNGTGVLILSP 259
>BC001238-1|AAH01238.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18 protein.
Length = 670
Score = 48.0 bits (109), Expect = 3e-05
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 388 NDLPGSSLCL-GILSDQKFTALEGTVCEPTLLGIKDMGFITRQRFKPKLYLLCWKGRDLV 564
+++P L L G D F +L V E TL IK+MGF + K +GRDL+
Sbjct: 161 SEVPSLPLGLTGAFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLL 220
Query: 565 GAAKTGSGK 591
AAKTGSGK
Sbjct: 221 AAAKTGSGK 229
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +2
Query: 575 KLALGKTLAFLIPGYRPYIQT*NFXPRNGYWSHLLSP 685
K GKTLAFLIP ++ F PRNG +LSP
Sbjct: 224 KTGSGKTLAFLIPAVELIVKL-RFMPRNGTGVLILSP 259
>AK001467-1|BAA91709.1| 670|Homo sapiens protein ( Homo sapiens
cDNA FLJ10605 fis, clone NT2RP2005126, highly similar to
H.sapiens mRNA for RNA helicase. ).
Length = 670
Score = 48.0 bits (109), Expect = 3e-05
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 388 NDLPGSSLCL-GILSDQKFTALEGTVCEPTLLGIKDMGFITRQRFKPKLYLLCWKGRDLV 564
+++P L L G D F +L V E TL IK+MGF + K +GRDL+
Sbjct: 161 SEVPSLPLGLTGAFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLL 220
Query: 565 GAAKTGSGK 591
AAKTGSGK
Sbjct: 221 AAAKTGSGK 229
>AC009404-1|AAX88947.1| 546|Homo sapiens unknown protein.
Length = 546
Score = 48.0 bits (109), Expect = 3e-05
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 388 NDLPGSSLCL-GILSDQKFTALEGTVCEPTLLGIKDMGFITRQRFKPKLYLLCWKGRDLV 564
+++P L L G D F +L V E TL IK+MGF + K +GRDL+
Sbjct: 37 SEVPSLPLGLTGAFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLL 96
Query: 565 GAAKTGSGK 591
AAKTGSGK
Sbjct: 97 AAAKTGSGK 105
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +2
Query: 575 KLALGKTLAFLIPGYRPYIQT*NFXPRNGYWSHLLSP 685
K GKTLAFLIP ++ F PRNG +LSP
Sbjct: 100 KTGSGKTLAFLIPAVELIVKL-RFMPRNGTGVLILSP 135
>CR457213-1|CAG33494.1| 547|Homo sapiens DDX56 protein.
Length = 547
Score = 33.5 bits (73), Expect = 0.72
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 424 LSDQKFTALEGTVCEPTLL-GIKDMGFITRQRFKPKLYLLCWKGRDLVGAAKTGSGKNTS 600
+ D + E +P LL + D+G+ + K L +G+DL+ A+TGSGK +
Sbjct: 1 MEDSEALGFEHMGLDPRLLQAVTDLGWSRSTLIQEKAIPLALEGKDLLARARTGSGKTAA 60
>BC001235-1|AAH01235.1| 547|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 56 protein.
Length = 547
Score = 33.1 bits (72), Expect = 0.95
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 424 LSDQKFTALEGTVCEPTLL-GIKDMGFITRQRFKPKLYLLCWKGRDLVGAAKTGSGKNTS 600
+ D + E +P LL + D+G+ + K L +G+DL+ A+TGSGK +
Sbjct: 1 MEDSEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA 60
>AK222662-1|BAD96382.1| 547|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 56 variant protein.
Length = 547
Score = 33.1 bits (72), Expect = 0.95
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 424 LSDQKFTALEGTVCEPTLL-GIKDMGFITRQRFKPKLYLLCWKGRDLVGAAKTGSGKNTS 600
+ D + E +P LL + D+G+ + K L +G+DL+ A+TGSGK +
Sbjct: 1 MEDSEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA 60
>AK022774-1|BAB14238.1| 547|Homo sapiens protein ( Homo sapiens
cDNA FLJ12712 fis, clone NT2RP1001080, weakly similar to
PROBABLE ATP-DEPENDENT RNA HELICASE DBP9. ).
Length = 547
Score = 33.1 bits (72), Expect = 0.95
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 424 LSDQKFTALEGTVCEPTLL-GIKDMGFITRQRFKPKLYLLCWKGRDLVGAAKTGSGKNTS 600
+ D + E +P LL + D+G+ + K L +G+DL+ A+TGSGK +
Sbjct: 1 MEDSEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA 60
>AJ131712-1|CAB87992.1| 547|Homo sapiens nucleolar RNA-helicase
protein.
Length = 547
Score = 33.1 bits (72), Expect = 0.95
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 424 LSDQKFTALEGTVCEPTLL-GIKDMGFITRQRFKPKLYLLCWKGRDLVGAAKTGSGKNTS 600
+ D + E +P LL + D+G+ + K L +G+DL+ A+TGSGK +
Sbjct: 1 MEDSEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA 60
>AF247666-1|AAG36876.1| 547|Homo sapiens DEAD-box RNA helicase
protein.
Length = 547
Score = 33.1 bits (72), Expect = 0.95
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 424 LSDQKFTALEGTVCEPTLL-GIKDMGFITRQRFKPKLYLLCWKGRDLVGAAKTGSGKNTS 600
+ D + E +P LL + D+G+ + K L +G+DL+ A+TGSGK +
Sbjct: 1 MEDSEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA 60
>U28042-1|AAC50823.1| 875|Homo sapiens protein ( Human DEAD box RNA
helicase-like protein mRNA, complete cds. ).
Length = 875
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 472 TLLGIKDMGFITRQRFKPKLYLLCWKGRDLVGAAKTGSGK 591
TL G+++ + + + L +G+D++GAAKTGSGK
Sbjct: 80 TLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGK 119
>BC093656-1|AAH93656.1| 875|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 10 protein.
Length = 875
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 472 TLLGIKDMGFITRQRFKPKLYLLCWKGRDLVGAAKTGSGK 591
TL G+++ + + + L +G+D++GAAKTGSGK
Sbjct: 80 TLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGK 119
>BC093654-1|AAH93654.1| 875|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 10 protein.
Length = 875
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 472 TLLGIKDMGFITRQRFKPKLYLLCWKGRDLVGAAKTGSGK 591
TL G+++ + + + L +G+D++GAAKTGSGK
Sbjct: 80 TLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGK 119
>BC091521-1|AAH91521.1| 875|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 10 protein.
Length = 875
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 472 TLLGIKDMGFITRQRFKPKLYLLCWKGRDLVGAAKTGSGK 591
TL G+++ + + + L +G+D++GAAKTGSGK
Sbjct: 80 TLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGK 119
>BC049217-1|AAH49217.1| 745|Homo sapiens DDX10 protein protein.
Length = 745
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 472 TLLGIKDMGFITRQRFKPKLYLLCWKGRDLVGAAKTGSGK 591
TL G+++ + + + L +G+D++GAAKTGSGK
Sbjct: 80 TLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGK 119
>AB209884-1|BAD93121.1| 845|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 10 variant protein.
Length = 845
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 472 TLLGIKDMGFITRQRFKPKLYLLCWKGRDLVGAAKTGSGK 591
TL G+++ + + + L +G+D++GAAKTGSGK
Sbjct: 90 TLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGK 129
>AB040537-1|BAB18536.1| 875|Homo sapiens RNA helicase protein.
Length = 875
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 472 TLLGIKDMGFITRQRFKPKLYLLCWKGRDLVGAAKTGSGK 591
TL G+++ + + + L +G+D++GAAKTGSGK
Sbjct: 80 TLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGK 119
>BC066938-1|AAH66938.1| 648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 43 protein.
Length = 648
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 463 CEPTLL-GIKDMGFITRQRFKPKLYLLCWKGRDLVGAAKTGSGK 591
C P ++ IK GF + + + + +G DL+G A+TG+GK
Sbjct: 249 CYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGK 292
>BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46 protein.
Length = 1031
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 550 GRDLVGAAKTGSGK 591
GRDL+G AKTGSGK
Sbjct: 409 GRDLIGIAKTGSGK 422
>AJ278110-1|CAB92442.1| 648|Homo sapiens DEAD-box protein protein.
Length = 648
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 463 CEPTLL-GIKDMGFITRQRFKPKLYLLCWKGRDLVGAAKTGSGK 591
C P ++ IK GF + + + + +G DL+G A+TG+GK
Sbjct: 249 CYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGK 292
>AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein.
Length = 1031
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 550 GRDLVGAAKTGSGK 591
GRDL+G AKTGSGK
Sbjct: 409 GRDLIGIAKTGSGK 422
>AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein.
Length = 1058
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 550 GRDLVGAAKTGSGK 591
GRDL+G AKTGSGK
Sbjct: 435 GRDLIGIAKTGSGK 448
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,507,263
Number of Sequences: 237096
Number of extensions: 1276573
Number of successful extensions: 2841
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2828
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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