Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060137.seq
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.4  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   1.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   1.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    24   1.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.5  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   9.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 477 TWICTIFVRTARLEVLRR 530
           TWICT+  +   LE+ +R
Sbjct: 92  TWICTLLKKDKLLELFKR 109


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 188 TLITAVLTRVAIVANVPYEL*NCEILNNFE 99
           +L+  +LT+   +  V Y +  C+ ++NFE
Sbjct: 178 SLVQLILTQAIFLMFVSYNIYVCQTVSNFE 207


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 188 TLITAVLTRVAIVANVPYEL*NCEILNNFE 99
           +L+  +LT+   +  V Y +  C+ ++NFE
Sbjct: 104 SLVQLILTQAIFLMFVSYNIYVCQTVSNFE 133


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 477 TWICTIFVRTARLEVLRR 530
           TWICT+  +   LE+ +R
Sbjct: 110 TWICTLLKKDKLLELFKR 127


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -3

Query: 227 VHAAIFVP*VGLITLITAVLTRVAIVANV 141
           VH  I V  +G + ++  ++  +AI+AN+
Sbjct: 404 VHRKIMVQSLGRVGVLVVIIGTLAIIANL 432


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -3

Query: 227 VHAAIFVP*VGLITLITAVLTRVAIVANV 141
           VH  I V  +G + ++  ++  +AI+AN+
Sbjct: 129 VHRKIMVQSLGRVGVLVVIIGTLAIIANL 157


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 236 KIGISPAGHAGSA 274
           K+G++P GH G+A
Sbjct: 111 KMGLAPTGHPGAA 123


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 236 KIGISPAGHAGSA 274
           K+G++P GH G+A
Sbjct: 3   KMGLAPTGHPGAA 15


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 362 CGSCGRLXAQPSVVLVHI 309
           C  CG+  A+PS +  H+
Sbjct: 252 CRICGKSYARPSTLKTHL 269


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 669 QVSQGINILTVPGHIHHXLESFAAQAMVRILIEINMXK 556
           QV+  I++L  PG +   + SFA        I+++  K
Sbjct: 42  QVTPVIHVLQYPGCVPKPIPSFACIGRCASYIQVSGSK 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,150
Number of Sequences: 336
Number of extensions: 3178
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)