Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060137.seq
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y10911-1|CAA71852.1| 161|Drosophila melanogaster NADH-ubiquinon... 69 5e-12
AY051764-1|AAK93188.1| 407|Drosophila melanogaster LD29280p pro... 69 5e-12
AE014297-3086|AAN13899.1| 407|Drosophila melanogaster CG6343-PB... 69 5e-12
AE014297-3085|AAF55947.1| 407|Drosophila melanogaster CG6343-PA... 69 5e-12
AY071287-1|AAL48909.1| 533|Drosophila melanogaster RE31310p pro... 30 2.6
AE014296-63|AAN11432.1| 533|Drosophila melanogaster CG32476-PA ... 30 2.6
AY061095-1|AAL28643.1| 456|Drosophila melanogaster LD08555p pro... 29 6.1
AE014297-1128|AAF54514.1| 456|Drosophila melanogaster CG4003-PA... 29 6.1
AY113316-1|AAM29321.1| 384|Drosophila melanogaster AT28104p pro... 29 8.0
AE014134-2522|AAF53410.1| 384|Drosophila melanogaster CG4701-PA... 29 8.0
>Y10911-1|CAA71852.1| 161|Drosophila melanogaster NADH-ubiquinone
oxidoreductase42 kDa subunit protein.
Length = 161
Score = 69.3 bits (162), Expect = 5e-12
Identities = 30/56 (53%), Positives = 42/56 (75%)
Frame = +2
Query: 341 LIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANXDLHYIRPNG 508
+ D+T+ RFD+NSKVI VEGP+AAGK+ FA LA++L M+++P + DL YI G
Sbjct: 26 IFDKTSKRFDENSKVICVEGPIAAGKSKFAKELAEELDMEYYPAVDLDLIYINSYG 81
Score = 54.4 bits (125), Expect = 1e-07
Identities = 30/80 (37%), Positives = 42/80 (52%)
Frame = +1
Query: 448 LGYEAFPRS*XGFALYSSERLDLRSFDDQVPXDTRTFXHVNFNQNPNHRLGCKTFQXMMY 627
L E +P +S D+R D Q+P R++ NF +P+H L + FQ MY
Sbjct: 62 LDMEYYPAVDLDLIYINSYGYDMRKLDPQLPPSCRSYDVRNFCLDPSHDLAAQ-FQIRMY 120
Query: 628 VARYSQYIDALGHLFNTWPG 687
+ RYSQYIDAL + +T G
Sbjct: 121 MLRYSQYIDALQRVLSTGQG 140
>AY051764-1|AAK93188.1| 407|Drosophila melanogaster LD29280p
protein.
Length = 407
Score = 69.3 bits (162), Expect = 5e-12
Identities = 30/56 (53%), Positives = 42/56 (75%)
Frame = +2
Query: 341 LIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANXDLHYIRPNG 508
+ D+T+ RFD+NSKVI VEGP+AAGK+ FA LA++L M+++P + DL YI G
Sbjct: 70 IFDKTSKRFDENSKVICVEGPIAAGKSKFAKELAEELDMEYYPAVDLDLIYINSYG 125
Score = 57.6 bits (133), Expect = 2e-08
Identities = 31/80 (38%), Positives = 43/80 (53%)
Frame = +1
Query: 448 LGYEAFPRS*XGFALYSSERLDLRSFDDQVPXDTRTFXHVNFNQNPNHRLGCKTFQXMMY 627
L E +P +S D+R D Q+P R++ NF +P+H L + FQ MY
Sbjct: 106 LDMEYYPAVDLDLIYINSYGYDMRKLDPQLPPSCRSYDVRNFCLDPSHDLAAQ-FQIRMY 164
Query: 628 VARYSQYIDALGHLFNTWPG 687
+ RYSQYIDAL H+ +T G
Sbjct: 165 MLRYSQYIDALQHVLSTGQG 184
>AE014297-3086|AAN13899.1| 407|Drosophila melanogaster CG6343-PB,
isoform B protein.
Length = 407
Score = 69.3 bits (162), Expect = 5e-12
Identities = 30/56 (53%), Positives = 42/56 (75%)
Frame = +2
Query: 341 LIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANXDLHYIRPNG 508
+ D+T+ RFD+NSKVI VEGP+AAGK+ FA LA++L M+++P + DL YI G
Sbjct: 70 IFDKTSKRFDENSKVICVEGPIAAGKSKFAKELAEELDMEYYPAVDLDLIYINSYG 125
Score = 57.6 bits (133), Expect = 2e-08
Identities = 31/80 (38%), Positives = 43/80 (53%)
Frame = +1
Query: 448 LGYEAFPRS*XGFALYSSERLDLRSFDDQVPXDTRTFXHVNFNQNPNHRLGCKTFQXMMY 627
L E +P +S D+R D Q+P R++ NF +P+H L + FQ MY
Sbjct: 106 LDMEYYPAVDLDLIYINSYGYDMRKLDPQLPPSCRSYDVRNFCLDPSHDLAAQ-FQIRMY 164
Query: 628 VARYSQYIDALGHLFNTWPG 687
+ RYSQYIDAL H+ +T G
Sbjct: 165 MLRYSQYIDALQHVLSTGQG 184
>AE014297-3085|AAF55947.1| 407|Drosophila melanogaster CG6343-PA,
isoform A protein.
Length = 407
Score = 69.3 bits (162), Expect = 5e-12
Identities = 30/56 (53%), Positives = 42/56 (75%)
Frame = +2
Query: 341 LIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANXDLHYIRPNG 508
+ D+T+ RFD+NSKVI VEGP+AAGK+ FA LA++L M+++P + DL YI G
Sbjct: 70 IFDKTSKRFDENSKVICVEGPIAAGKSKFAKELAEELDMEYYPAVDLDLIYINSYG 125
Score = 57.6 bits (133), Expect = 2e-08
Identities = 31/80 (38%), Positives = 43/80 (53%)
Frame = +1
Query: 448 LGYEAFPRS*XGFALYSSERLDLRSFDDQVPXDTRTFXHVNFNQNPNHRLGCKTFQXMMY 627
L E +P +S D+R D Q+P R++ NF +P+H L + FQ MY
Sbjct: 106 LDMEYYPAVDLDLIYINSYGYDMRKLDPQLPPSCRSYDVRNFCLDPSHDLAAQ-FQIRMY 164
Query: 628 VARYSQYIDALGHLFNTWPG 687
+ RYSQYIDAL H+ +T G
Sbjct: 165 MLRYSQYIDALQHVLSTGQG 184
>AY071287-1|AAL48909.1| 533|Drosophila melanogaster RE31310p
protein.
Length = 533
Score = 30.3 bits (65), Expect = 2.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 240 ILYKRTCCYFCTLSWADNFNYSC 172
+ YK CC C+ SWA FN++C
Sbjct: 332 VWYKLPCCIQCSKSWA-TFNFAC 353
>AE014296-63|AAN11432.1| 533|Drosophila melanogaster CG32476-PA
protein.
Length = 533
Score = 30.3 bits (65), Expect = 2.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 240 ILYKRTCCYFCTLSWADNFNYSC 172
+ YK CC C+ SWA FN++C
Sbjct: 332 VWYKLPCCIQCSKSWA-TFNFAC 353
>AY061095-1|AAL28643.1| 456|Drosophila melanogaster LD08555p
protein.
Length = 456
Score = 29.1 bits (62), Expect = 6.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 380 KVIIVEGPVAAGKTAFAASLADDLGMK 460
+ +++ GP GKTA A ++A +LG K
Sbjct: 64 RALLLAGPPGTGKTAIALAIAQELGNK 90
>AE014297-1128|AAF54514.1| 456|Drosophila melanogaster CG4003-PA
protein.
Length = 456
Score = 29.1 bits (62), Expect = 6.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 380 KVIIVEGPVAAGKTAFAASLADDLGMK 460
+ +++ GP GKTA A ++A +LG K
Sbjct: 64 RALLLAGPPGTGKTAIALAIAQELGNK 90
>AY113316-1|AAM29321.1| 384|Drosophila melanogaster AT28104p
protein.
Length = 384
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 380 KVIIVEGPVAAGKTAFAASLADDLGMK 460
K +++ GP GKT A ++A D GM+
Sbjct: 131 KGVLLHGPPGCGKTLIAKAIAKDAGMR 157
>AE014134-2522|AAF53410.1| 384|Drosophila melanogaster CG4701-PA
protein.
Length = 384
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 380 KVIIVEGPVAAGKTAFAASLADDLGMK 460
K +++ GP GKT A ++A D GM+
Sbjct: 131 KGVLLHGPPGCGKTLIAKAIAKDAGMR 157
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,522,137
Number of Sequences: 53049
Number of extensions: 574196
Number of successful extensions: 1665
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1661
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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