Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060136.seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.2  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.5  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    21   9.5  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -3

Query: 207 LDIDHSALLKVPFTDFHAEFXVSLKQLWLEYRYKKDAAHRTSLCQ 73
           LD+ H+ L K+P T        +L +L L +      +H   L +
Sbjct: 348 LDVSHNLLGKLPLTSLSLASAQTLSELDLSWNSISSLSHGGQLAR 392


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +3

Query: 636  EYQLVCHINDFIWY 677
            +Y++VC+  ++ WY
Sbjct: 2320 DYKVVCYFTNWAWY 2333



 Score = 21.8 bits (44), Expect = 5.4
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +3

Query: 636  EYQLVCHINDFIWY 677
            E+++VC+  ++ WY
Sbjct: 1822 EFKVVCYFTNWAWY 1835


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -1

Query: 323 DIKESI*IVRKEILITFKWVPSHPELRAMKKLTGLPLEILTL 198
           ++++ I     E+L   K  P++ +L+ MK L     E+L L
Sbjct: 333 EVQDKIVEEMNEVLGDIKKKPTYQDLQEMKYLERCVKEVLRL 374


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -1

Query: 323 DIKESI*IVRKEILITFKWVPSHPELRAMKKLTGLPLEILTL 198
           ++++ I     E+L   K  P++ +L+ MK L     E+L L
Sbjct: 333 EVQDKIVEEMNEVLGDIKKKPTYQDLQEMKYLERCVKEVLRL 374


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 464 VMLVFRFCCIL 432
           V+  F FCCIL
Sbjct: 9   VLFFFSFCCIL 19


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -1

Query: 323 DIKESI*IVRKEILITFKWVPSHPELRAMKKLTGLPLEILTL 198
           +++ESI    +E+L      PS+ +L+ +K L     E L L
Sbjct: 17  EVQESIVAEMREVLGDLSKKPSYNDLQNLKYLERCIKETLRL 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,208
Number of Sequences: 336
Number of extensions: 3109
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)