Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060136.seq
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   1.7  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   3.9  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   6.8  
AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative apyrase/n...    23   6.8  
AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5' nucleo...    23   6.8  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 604 YLENSNFYTLYRDSSKTDHNVASACHL 524
           ++E+ N + LYR   K DH + SA HL
Sbjct: 905 FVESQNRHELYRTVYKADHGL-SALHL 930


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -3

Query: 207  LDIDHSALLKVPFTDFHAEFXVSLKQLWLEYRYKKDAAHRTSLCQHHTKLSGADN 43
            L +DH+ L  +    F  E   SLK+L+L+Y      A+ T    H  K+   D+
Sbjct: 845  LQLDHNLLTAL--NGFEFEGLDSLKELFLQYNRIASIANHTFDHLHGLKILRLDH 897


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 182 LKFHLQISMLNSXFH*SNF 126
           +K +  ISM N+ FH SNF
Sbjct: 355 VKLNDMISMFNNSFHCSNF 373


>AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 566

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 231 ADRATIGNLDIDHSALLKVPF 169
           AD  T+GN + DH     VPF
Sbjct: 135 ADAMTLGNHEFDHGVEGLVPF 155


>AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 566

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 231 ADRATIGNLDIDHSALLKVPF 169
           AD  T+GN + DH     VPF
Sbjct: 135 ADAMTLGNHEFDHGVEGLVPF 155


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,131
Number of Sequences: 2352
Number of extensions: 12566
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)