Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060135.seq
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.9  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    23   2.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.1  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   6.8  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   9.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   9.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   9.0  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 585 WNRGLMTGSPSTVC 544
           WN GL+ G P + C
Sbjct: 302 WNHGLLQGDPLSGC 315


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 273 AASVPMCLSLAIAGNSFCGSDVGGF 347
           AA+ P  +S   AG S C S+VG F
Sbjct: 100 AATDPSVVSKFRAGFSECASEVGRF 124


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 303 PVTSTSARKPQGTTTP 256
           P  S++ +KPQ T TP
Sbjct: 418 PTESSTTQKPQTTKTP 433


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 4   TSNGPEVTMPKDCRHYKPPQDGL 72
           +S+ P    P D   + PP DG+
Sbjct: 183 SSSSPPGVFPVDAPMHSPPGDGI 205


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = -1

Query: 364 ASGYLKNPPTSEPQKLFPAIASDKHIGTEAARNDH 260
           A+GY       + Q+  P   S  H+   AA N H
Sbjct: 93  AAGYYGPQQQMDGQEYRPDSPSSMHMANTAAPNGH 127


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 118 YGLWNLRATNTG 153
           YG++N+RA  TG
Sbjct: 331 YGVFNIRARRTG 342


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 118 YGLWNLRATNTG 153
           YG++N+RA  TG
Sbjct: 331 YGVFNIRARRTG 342


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 473 GDGRVQPGLAPLG 435
           G G   PGL+PLG
Sbjct: 255 GQGFAVPGLSPLG 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,533
Number of Sequences: 336
Number of extensions: 3368
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)