Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060135.seq
         (661 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    26   1.2  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    25   2.1  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    25   2.1  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    25   2.1  
AY745217-1|AAU93484.1|   98|Anopheles gambiae cytochrome P450 pr...    23   6.5  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    23   6.5  
AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    23   6.5  

>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 15/59 (25%), Positives = 25/59 (42%)
 Frame = +2

Query: 392 GRVPAVLPGPLAHRDQAARALAVPGRHHRAHPGRQPQEIALLDFWYTLFXEHTVDGLPV 568
           GRV  VLP     R++   +L    + H+      P ++A+ D  Y    E  +   P+
Sbjct: 457 GRVAQVLPSLEEVRERVQASLRTLRQDHKRTLNPTPYKVAVSDNLYNFIHELWLQNAPI 515


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 18/67 (26%), Positives = 29/67 (43%)
 Frame = +1

Query: 64  DGLEGLAAYWEHRHVHNEYGLWNLRATNTGLLDRADGVYRPFLLTRAVFAGTQRYSAVWT 243
           D +E L     H  V+NE+G   L       +   DG +      R++ +G  + + + T
Sbjct: 423 DAVECLRGKDPHVLVNNEWG--TLGICEFPFVPVVDGAFLDETPQRSLASGRFKKTEILT 480

Query: 244 GDNTRSG 264
           G NT  G
Sbjct: 481 GSNTEEG 487


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 18/67 (26%), Positives = 29/67 (43%)
 Frame = +1

Query: 64  DGLEGLAAYWEHRHVHNEYGLWNLRATNTGLLDRADGVYRPFLLTRAVFAGTQRYSAVWT 243
           D +E L     H  V+NE+G   L       +   DG +      R++ +G  + + + T
Sbjct: 423 DAVECLRGKDPHVLVNNEWG--TLGICEFPFVPVVDGAFLDETPQRSLASGRFKKTEILT 480

Query: 244 GDNTRSG 264
           G NT  G
Sbjct: 481 GSNTEEG 487


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 18/67 (26%), Positives = 29/67 (43%)
 Frame = +1

Query: 64  DGLEGLAAYWEHRHVHNEYGLWNLRATNTGLLDRADGVYRPFLLTRAVFAGTQRYSAVWT 243
           D +E L     H  V+NE+G   L       +   DG +      R++ +G  + + + T
Sbjct: 309 DAVECLRGKDPHVLVNNEWG--TLGICEFPFVPVVDGAFLDETPQRSLASGRFKKTEILT 366

Query: 244 GDNTRSG 264
           G NT  G
Sbjct: 367 GSNTEEG 373


>AY745217-1|AAU93484.1|   98|Anopheles gambiae cytochrome P450
           protein.
          Length = 98

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 312 RLLPVTSTSARKPQGTTTPRIVTCP 238
           RLLP+T   AR P      + VT P
Sbjct: 29  RLLPITGLIARTPMKEVQAQDVTLP 53


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -1

Query: 598 SGVVLEQGPHDRQPVHRVLXEQSVPEVEQRYLL 500
           SG V  QG H +  VH++   ++  +   R+ +
Sbjct: 31  SGFVRRQGSHAKSSVHKLCHARNTTQPRTRWYI 63


>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 405 PFFRAHSHIETKRREPWLY 461
           PF  A SHI+ KRR   ++
Sbjct: 176 PFLNADSHIKRKRRHRTIF 194


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,528
Number of Sequences: 2352
Number of extensions: 15213
Number of successful extensions: 257
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)