Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060135.seq
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical pr... 114 5e-26
Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical pr... 114 5e-26
AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical ... 113 1e-25
U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical p... 53 2e-07
Z77663-7|CAB01206.1| 856|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U40800-5|AAO91743.1| 936|Caenorhabditis elegans Hypothetical pr... 51 8e-07
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 25 7.7
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 27 8.9
AC006780-7|AAF60648.1| 394|Caenorhabditis elegans Hypothetical ... 27 8.9
AC006780-6|AAF60647.1| 401|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical
protein F40F9.6b protein.
Length = 910
Score = 114 bits (275), Expect = 5e-26
Identities = 49/82 (59%), Positives = 63/82 (76%)
Frame = +3
Query: 255 AEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFRAHSHIE 434
A+W L + PM LSL+IAG F G+DVGGFF P+ +L++RWYQ AAFQPFFRAH+HI+
Sbjct: 581 ADWGHLEIAAPMTLSLSIAGVPFVGADVGGFFGNPDEQLLSRWYQTAAFQPFFRAHAHID 640
Query: 435 TKRREPWLYPAVTTALIRDANR 500
T+RREPWL+ T +IR+A R
Sbjct: 641 TRRREPWLFSEQTQQIIREALR 662
Score = 77.4 bits (182), Expect = 8e-15
Identities = 40/82 (48%), Positives = 51/82 (62%)
Frame = +1
Query: 10 NGPEVTMPKDCRHYKPPQDGLEGLAAYWEHRHVHNEYGLWNLRATNTGLLDRADGVYRPF 189
+GPE+TM K+ HY G+E HR +HN YG+ AT G++ R G RPF
Sbjct: 510 SGPEITMDKESIHY----GGIE-------HREIHNMYGMMYTSATFDGMIARTGGKERPF 558
Query: 190 LLTRAVFAGTQRYSAVWTGDNT 255
LL+RA F GTQR +A+WTGDNT
Sbjct: 559 LLSRAGFIGTQRTAAIWTGDNT 580
Score = 44.8 bits (101), Expect = 6e-05
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2
Query: 509 ALLDFWYTLFXEHTVDGLPVMRPLFQHY 592
ALL +WYTLF +HT +G+P MRPLF +
Sbjct: 666 ALLPYWYTLFQQHTENGVPPMRPLFYEF 693
>Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical
protein F40F9.6a protein.
Length = 924
Score = 114 bits (275), Expect = 5e-26
Identities = 49/82 (59%), Positives = 63/82 (76%)
Frame = +3
Query: 255 AEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFRAHSHIE 434
A+W L + PM LSL+IAG F G+DVGGFF P+ +L++RWYQ AAFQPFFRAH+HI+
Sbjct: 595 ADWGHLEIAAPMTLSLSIAGVPFVGADVGGFFGNPDEQLLSRWYQTAAFQPFFRAHAHID 654
Query: 435 TKRREPWLYPAVTTALIRDANR 500
T+RREPWL+ T +IR+A R
Sbjct: 655 TRRREPWLFSEQTQQIIREALR 676
Score = 77.4 bits (182), Expect = 8e-15
Identities = 40/82 (48%), Positives = 51/82 (62%)
Frame = +1
Query: 10 NGPEVTMPKDCRHYKPPQDGLEGLAAYWEHRHVHNEYGLWNLRATNTGLLDRADGVYRPF 189
+GPE+TM K+ HY G+E HR +HN YG+ AT G++ R G RPF
Sbjct: 524 SGPEITMDKESIHY----GGIE-------HREIHNMYGMMYTSATFDGMIARTGGKERPF 572
Query: 190 LLTRAVFAGTQRYSAVWTGDNT 255
LL+RA F GTQR +A+WTGDNT
Sbjct: 573 LLSRAGFIGTQRTAAIWTGDNT 594
Score = 44.8 bits (101), Expect = 6e-05
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2
Query: 509 ALLDFWYTLFXEHTVDGLPVMRPLFQHY 592
ALL +WYTLF +HT +G+P MRPLF +
Sbjct: 680 ALLPYWYTLFQQHTENGVPPMRPLFYEF 707
>AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical
protein F52D1.1 protein.
Length = 903
Score = 113 bits (272), Expect = 1e-25
Identities = 50/80 (62%), Positives = 60/80 (75%)
Frame = +3
Query: 255 AEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFRAHSHIE 434
A+W+ L S+PM LSL+ AG F G+DVGGFF P+ EL+ RWYQA AFQPFFR HSH +
Sbjct: 573 ADWAHLKQSIPMLLSLSTAGLPFVGADVGGFFGNPDEELLVRWYQAGAFQPFFRGHSHQD 632
Query: 435 TKRREPWLYPAVTTALIRDA 494
TKRREPWL+ TT IR+A
Sbjct: 633 TKRREPWLFADNTTEAIRNA 652
Score = 74.5 bits (175), Expect = 6e-14
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = +1
Query: 10 NGPEVTMPKDCRHYKPPQDGLEGLAAYWEHRHVHNEYGLWNLRATNTGLLDRADGVYRPF 189
NGPE+TM KD +H+ +EHR VHN YG +T GL R++ RPF
Sbjct: 502 NGPEITMHKDAKHH-----------GEFEHRDVHNVYGFHQHSSTFEGLKARSNNEVRPF 550
Query: 190 LLTRAVFAGTQRYSAVWTGDN 252
+L+R+ FAG+QR +AVWTGDN
Sbjct: 551 VLSRSFFAGSQRTAAVWTGDN 571
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 509 ALLDFWYTLFXEHTVDGLPVMRPLFQHY 592
A L +WYTLF EH G PVMRP + +
Sbjct: 658 AFLPYWYTLFYEHAKTGKPVMRPFWMEF 685
>U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical
protein R05F9.12 protein.
Length = 955
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/75 (37%), Positives = 36/75 (48%)
Frame = +3
Query: 255 AEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFRAHSHIE 434
A W L SV + G + GSDV GF EL RW Q AF FFR H+ I
Sbjct: 590 ARWEDLRTSVIGAQEFNLFGIPYVGSDVCGFIGTTTEELCLRWQQMGAFHSFFRNHNTIG 649
Query: 435 TKRREPWLYPAVTTA 479
++P ++P+V A
Sbjct: 650 APAQDPAVWPSVAAA 664
Score = 31.9 bits (69), Expect = 0.41
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +1
Query: 103 HVHNEYGLWNLRATNTGLLDRADGVYRPFLLTRAVFAGTQRYSAVWTGDNTRSGRSLR 276
+V N YGL T L +A G R +++R+ + RY+ W GDNT LR
Sbjct: 541 NVKNLYGLTEAINTQKALF-KATGK-RGAVVSRSTYPSAGRYAGHWLGDNTARWEDLR 596
>Z77663-7|CAB01206.1| 856|Caenorhabditis elegans Hypothetical
protein F53F4.8 protein.
Length = 856
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/75 (36%), Positives = 36/75 (48%)
Frame = +3
Query: 255 AEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFRAHSHIE 434
A W L SV + G + GSDV GF EL RW Q AF FFR H+ +
Sbjct: 523 ARWEDLRTSVIGAQEFNLFGIPYVGSDVCGFLGTSNEELCLRWQQMGAFHSFFRNHNTLG 582
Query: 435 TKRREPWLYPAVTTA 479
++P ++P+V A
Sbjct: 583 EPAQDPAVWPSVAAA 597
Score = 33.1 bits (72), Expect = 0.18
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +1
Query: 106 VHNEYGLWNLRATNTGLLDRADGVYRPFLLTRAVFAGTQRYSAVWTGDNTRSGRSLR 276
V N +GL T LLD R +++R+ F RY+ W GDNT LR
Sbjct: 475 VKNLFGLTEAIQTQQALLDVTGK--RGAVVSRSTFPSAGRYAGHWLGDNTARWEDLR 529
>U40800-5|AAO91743.1| 936|Caenorhabditis elegans Hypothetical
protein D2096.3 protein.
Length = 936
Score = 50.8 bits (116), Expect = 8e-07
Identities = 26/75 (34%), Positives = 37/75 (49%)
Frame = +3
Query: 255 AEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFRAHSHIE 434
A W L SV + + G + GSD+ GF EL RW+Q AF PF R H+
Sbjct: 595 ARWGDLQTSVIGVMEFNMFGVPYVGSDICGFNGVSNEELCLRWHQFGAFSPFSRDHNSEG 654
Query: 435 TKRREPWLYPAVTTA 479
++P ++P+V A
Sbjct: 655 MPDQDPAVWPSVANA 669
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 112 NEYGLWNLRATNTGLLDRADGVYRPFLLTRAVFAGTQRYSAVWTGDNT 255
N YG RAT + + G R +++R+ F + RY W GDNT
Sbjct: 549 NLYGWSEARATYQAI-PQVTGK-RSAVISRSTFPSSGRYGGHWLGDNT 594
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 140 PPTRGCWTAPTASTDPSCSRGPCSQAPRDTLRYGQVTIR 256
PP RG AP P+ P ++AP T R T R
Sbjct: 295 PPPRGSTAAPGTRAPPATRAPPATRAPPATTRAPPATTR 333
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 25.4 bits (53), Expect(2) = 7.7
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +2
Query: 143 PTRGCWTAPTASTDPSCSRGPCSQAPRDTLRYGQVTIRGVVVPCG 277
P + C A T S SCS +Q P T + + PCG
Sbjct: 373 PMQQCAPACTQSCSQSCSAAQPAQMPCQTQSVNSCSCQQNYSPCG 417
Score = 20.6 bits (41), Expect(2) = 7.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 20 RSPCPRTVATTSRPRMV 70
+S C VATT+ P++V
Sbjct: 325 QSACQAPVATTAAPQVV 341
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 461 PGRHHRAHPGRQPQE 505
PG+HH HPG P E
Sbjct: 80 PGQHHPQHPGMPPME 94
>AC006780-7|AAF60648.1| 394|Caenorhabditis elegans Hypothetical
protein Y47D9A.1b protein.
Length = 394
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 470 DGRVQPGLAPLGLDVRVGPE 411
DGR+ P L LG DV V PE
Sbjct: 351 DGRLTPSLTILGSDVSVAPE 370
>AC006780-6|AAF60647.1| 401|Caenorhabditis elegans Hypothetical
protein Y47D9A.1a protein.
Length = 401
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 470 DGRVQPGLAPLGLDVRVGPE 411
DGR+ P L LG DV V PE
Sbjct: 358 DGRLTPSLTILGSDVSVAPE 377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,154,864
Number of Sequences: 27780
Number of extensions: 322939
Number of successful extensions: 1063
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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