Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060134.seq
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.3  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.4  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 325 CKYLAGSGHKAKCERGY 375
           C  L G GH+ +C+ G+
Sbjct: 44  CVNLPGVGHRCQCQPGF 60


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +2

Query: 242 QSECVHARQQXRSPVTNIARTSFFHIKRANIW 337
           Q E   A Q     V N     FF +KR+ ++
Sbjct: 323 QQELYMAAQVIEKSVANFTAAGFFDVKRSTLF 354


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -3

Query: 242  ECVHSITTNIISVDSRDQHLAFMVINEQA 156
            E +H I TN   +  + +  +  ++NE+A
Sbjct: 941  ELIHKIATNDHEIIDKIEMFSLQILNERA 969



 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -3

Query: 242 ECVHSITTNIISVDSRDQHLAFMVINEQA 156
           E +H I TN   +  + +  +  ++NE+A
Sbjct: 665 ELIHKIETNDHEIIDKIEMFSLQILNERA 693



 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -3

Query: 242  ECVHSITTNIISVDSRDQHLAFMVINEQA 156
            E +H I TN   +  + +  +  ++NE+A
Sbjct: 1043 ELIHKIETNEHEIIDKIEMFSLQILNERA 1071


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -3

Query: 242 ECVHSITTNIISVDSRDQHLAFMVINEQA 156
           E +H I TN   +  + +  +  ++NE+A
Sbjct: 324 ELIHKIETNEHEIIDKIEMFSLQILNERA 352


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 631 ASPIWPS*LGEVNLG 587
           A+ +WP   GEV++G
Sbjct: 60  AAALWPKPTGEVHVG 74


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 256 PCSPAGAITCYQ 291
           PCS AG + C Q
Sbjct: 306 PCSNAGTLDCVQ 317


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,360
Number of Sequences: 336
Number of extensions: 3031
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)