Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060134.seq
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   3.9  
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    23   6.8  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    23   6.8  
Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease prot...    23   9.0  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   9.0  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   9.0  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 168  YNHKGEVLISRVYRDDIGRN 227
            YNH  E ++  V+ + IGRN
Sbjct: 1710 YNHVAESILHAVHDEPIGRN 1729


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 590 GACPXLGXRLDAPAGVMNVXRPPVSE 513
           G C  L   +D+ +GV+   +P VSE
Sbjct: 18  GRCTVLHQSVDSASGVLIAKQPSVSE 43


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 590 GACPXLGXRLDAPAGVMNVXRPPVSE 513
           G C  L   +D+ +GV+   +P VSE
Sbjct: 18  GRCTVLHQSVDSASGVLIAKQPSVSE 43


>Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 12/53 (22%), Positives = 20/53 (37%)
 Frame = +3

Query: 183 EVLISRVYRDDIGRNAVDAFRVNVSMLASRXDHLLPTSHAHLSSISSVQIFGW 341
           E+ +   Y   +G N +  FRV+     +R   L+     +        I GW
Sbjct: 109 EMYVHEDYEGSVGPNDIAIFRVDKPFHLNRNIQLVSLPEPNAIPTGETTISGW 161


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +3

Query: 102 ITLKPILKECEASPTMIGGLFVYNHKGEVLISRVYR--DDIGRNAVDAF-RVNVSMLASR 272
           ITL+  +  C  S  ++       H   +L+S +YR   + G  AVD+  RV V    SR
Sbjct: 3   ITLQINISNCSTSQNLMLQAAKEQHADVILVSELYRHPPNNGNWAVDSSGRVAVVAAGSR 62


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 120 LKECEASPTMIGGLFVYNHKGEV-LISRVYRDDIGRN 227
           L  CE    M+G L +   KG+V ++S  YR   G N
Sbjct: 8   LNHCEEVQDMLGQLLI-EEKGDVAMLSEPYRCPSGVN 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,377
Number of Sequences: 2352
Number of extensions: 12671
Number of successful extensions: 44
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)