Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060134.seq
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070712-1|AAL48183.1|  437|Drosophila melanogaster SD05403p pro...   167   1e-41
AJ005962-1|CAA06785.1|  437|Drosophila melanogaster clathrin-ass...   167   1e-41
AF110232-1|AAF14248.1|  437|Drosophila melanogaster clathrin-ass...   167   1e-41
AE014297-3160|AAF56002.3|  437|Drosophila melanogaster CG7057-PB...   167   1e-41
AE014297-3159|AAF56001.1|  437|Drosophila melanogaster CG7057-PA...   167   1e-41
AY058621-1|AAL13850.1|  426|Drosophila melanogaster LD31377p pro...    88   9e-18
AJ006219-1|CAA06918.1|  426|Drosophila melanogaster clathrin-ass...    88   9e-18
AF110231-1|AAF14247.1|  426|Drosophila melanogaster clathrin-ass...    88   9e-18
AE014297-967|AAF54399.1|  426|Drosophila melanogaster CG9388-PA ...    88   9e-18
AY069388-1|AAL39533.1|  415|Drosophila melanogaster LD09732p pro...    65   1e-10
AJ009657-1|CAA08768.1|  415|Drosophila melanogaster Mu3 subunit ...    65   1e-10
AF110233-1|AAF14249.1|  415|Drosophila melanogaster clathrin-ass...    65   1e-10
AE014298-989|AAF46231.1|  415|Drosophila melanogaster CG3035-PA ...    65   1e-10
AY061172-1|AAL28720.1|  157|Drosophila melanogaster LD14109p pro...    38   0.017
AF228054-1|AAG43051.1|  164|Drosophila melanogaster clathrin-ass...    38   0.017
AE014297-3422|AAF56212.2|  157|Drosophila melanogaster CG5864-PA...    38   0.017
BT025121-1|ABE73292.1|  292|Drosophila melanogaster IP09335p pro...    30   3.4  
AE014298-1479|AAF46613.1|  292|Drosophila melanogaster CG12637-P...    30   3.4  
AF521597-1|AAN62853.1|  256|Drosophila melanogaster MSP-300 prot...    29   5.9  
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB...    29   5.9  
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    29   5.9  

>AY070712-1|AAL48183.1|  437|Drosophila melanogaster SD05403p
           protein.
          Length = 437

 Score =  167 bits (406), Expect = 1e-41
 Identities = 82/101 (81%), Positives = 86/101 (85%)
 Frame = +2

Query: 254 VHARQQXRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIXDVMQSYFGKI 433
           +HARQQ RSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKI +VMQSYFGKI
Sbjct: 37  IHARQQVRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIEVMQSYFGKI 96

Query: 434 SEEXXXNNFVLIYELLDEILDFGYPRILILGAXRHSSLQQG 556
           SEE   NNFVLIYELLDEILDFGYP+    G  +    QQG
Sbjct: 97  SEENIKNNFVLIYELLDEILDFGYPQNTDSGTLKTFITQQG 137



 Score = 78.6 bits (185), Expect = 7e-15
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = +3

Query: 147 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNV 254
           MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNV
Sbjct: 1   MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNV 36


>AJ005962-1|CAA06785.1|  437|Drosophila melanogaster
           clathrin-associated protein protein.
          Length = 437

 Score =  167 bits (406), Expect = 1e-41
 Identities = 82/101 (81%), Positives = 86/101 (85%)
 Frame = +2

Query: 254 VHARQQXRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIXDVMQSYFGKI 433
           +HARQQ RSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKI +VMQSYFGKI
Sbjct: 37  IHARQQVRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIEVMQSYFGKI 96

Query: 434 SEEXXXNNFVLIYELLDEILDFGYPRILILGAXRHSSLQQG 556
           SEE   NNFVLIYELLDEILDFGYP+    G  +    QQG
Sbjct: 97  SEENIKNNFVLIYELLDEILDFGYPQNTDSGTLKTFITQQG 137



 Score = 78.6 bits (185), Expect = 7e-15
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = +3

Query: 147 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNV 254
           MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNV
Sbjct: 1   MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNV 36


>AF110232-1|AAF14248.1|  437|Drosophila melanogaster
           clathrin-associated adaptor complexAP-2 medium chain
           protein.
          Length = 437

 Score =  167 bits (406), Expect = 1e-41
 Identities = 82/101 (81%), Positives = 86/101 (85%)
 Frame = +2

Query: 254 VHARQQXRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIXDVMQSYFGKI 433
           +HARQQ RSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKI +VMQSYFGKI
Sbjct: 37  IHARQQVRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIEVMQSYFGKI 96

Query: 434 SEEXXXNNFVLIYELLDEILDFGYPRILILGAXRHSSLQQG 556
           SEE   NNFVLIYELLDEILDFGYP+    G  +    QQG
Sbjct: 97  SEENIKNNFVLIYELLDEILDFGYPQNTDSGTLKTFITQQG 137



 Score = 78.6 bits (185), Expect = 7e-15
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = +3

Query: 147 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNV 254
           MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNV
Sbjct: 1   MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNV 36


>AE014297-3160|AAF56002.3|  437|Drosophila melanogaster CG7057-PB,
           isoform B protein.
          Length = 437

 Score =  167 bits (406), Expect = 1e-41
 Identities = 82/101 (81%), Positives = 86/101 (85%)
 Frame = +2

Query: 254 VHARQQXRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIXDVMQSYFGKI 433
           +HARQQ RSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKI +VMQSYFGKI
Sbjct: 37  IHARQQVRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIEVMQSYFGKI 96

Query: 434 SEEXXXNNFVLIYELLDEILDFGYPRILILGAXRHSSLQQG 556
           SEE   NNFVLIYELLDEILDFGYP+    G  +    QQG
Sbjct: 97  SEENIKNNFVLIYELLDEILDFGYPQNTDSGTLKTFITQQG 137



 Score = 78.6 bits (185), Expect = 7e-15
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = +3

Query: 147 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNV 254
           MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNV
Sbjct: 1   MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNV 36


>AE014297-3159|AAF56001.1|  437|Drosophila melanogaster CG7057-PA,
           isoform A protein.
          Length = 437

 Score =  167 bits (406), Expect = 1e-41
 Identities = 82/101 (81%), Positives = 86/101 (85%)
 Frame = +2

Query: 254 VHARQQXRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIXDVMQSYFGKI 433
           +HARQQ RSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKI +VMQSYFGKI
Sbjct: 37  IHARQQVRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIEVMQSYFGKI 96

Query: 434 SEEXXXNNFVLIYELLDEILDFGYPRILILGAXRHSSLQQG 556
           SEE   NNFVLIYELLDEILDFGYP+    G  +    QQG
Sbjct: 97  SEENIKNNFVLIYELLDEILDFGYPQNTDSGTLKTFITQQG 137



 Score = 78.6 bits (185), Expect = 7e-15
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = +3

Query: 147 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNV 254
           MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNV
Sbjct: 1   MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNV 36


>AY058621-1|AAL13850.1|  426|Drosophila melanogaster LD31377p
           protein.
          Length = 426

 Score = 88.2 bits (209), Expect = 9e-18
 Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
 Frame = +2

Query: 278 SPVTNIARTSFFHIKRANIWLAAVT--KQNVNAAMVFEFLLKIXDVMQSYFGKISEEXXX 451
           +P+   A T+F +IK  N+++ + T   +NVN A+VF FL KI  V   YF ++ EE   
Sbjct: 48  TPILQTAETTFAYIKTNNLYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIR 107

Query: 452 NNFVLIYELLDEILDFGYPRILILGAXRHSSLQQGHQVXL-PR 577
           +NFV+IYELLDE+LDFGYP+       +    Q+GH++ L PR
Sbjct: 108 DNFVIIYELLDELLDFGYPQTTDSKILQEYITQEGHKLELQPR 150



 Score = 28.7 bits (61), Expect = 7.8
 Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 159 LFVYNHKGEVLISRVYR-DDIGRNAVDAF 242
           +FV + KG+VLISR YR D+I    +D F
Sbjct: 6   IFVLDVKGKVLISRNYRGDNIDMAVIDKF 34


>AJ006219-1|CAA06918.1|  426|Drosophila melanogaster
           clathrin-associated protein protein.
          Length = 426

 Score = 88.2 bits (209), Expect = 9e-18
 Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
 Frame = +2

Query: 278 SPVTNIARTSFFHIKRANIWLAAVT--KQNVNAAMVFEFLLKIXDVMQSYFGKISEEXXX 451
           +P+   A T+F +IK  N+++ + T   +NVN A+VF FL KI  V   YF ++ EE   
Sbjct: 48  TPILQTAETTFAYIKTNNLYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIR 107

Query: 452 NNFVLIYELLDEILDFGYPRILILGAXRHSSLQQGHQVXL-PR 577
           +NFV+IYELLDE+LDFGYP+       +    Q+GH++ L PR
Sbjct: 108 DNFVIIYELLDELLDFGYPQTTDSKILQEYITQEGHKLELQPR 150



 Score = 28.7 bits (61), Expect = 7.8
 Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 159 LFVYNHKGEVLISRVYR-DDIGRNAVDAF 242
           +FV + KG+VLISR YR D+I    +D F
Sbjct: 6   IFVLDVKGKVLISRNYRGDNIDMAVIDKF 34


>AF110231-1|AAF14247.1|  426|Drosophila melanogaster
           clathrin-associated adaptor complexAP-1 medium chain
           protein.
          Length = 426

 Score = 88.2 bits (209), Expect = 9e-18
 Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
 Frame = +2

Query: 278 SPVTNIARTSFFHIKRANIWLAAVT--KQNVNAAMVFEFLLKIXDVMQSYFGKISEEXXX 451
           +P+   A T+F +IK  N+++ + T   +NVN A+VF FL KI  V   YF ++ EE   
Sbjct: 48  TPILQTAETTFAYIKTNNLYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIR 107

Query: 452 NNFVLIYELLDEILDFGYPRILILGAXRHSSLQQGHQVXL-PR 577
           +NFV+IYELLDE+LDFGYP+       +    Q+GH++ L PR
Sbjct: 108 DNFVIIYELLDELLDFGYPQTTDSKILQEYITQEGHKLELQPR 150



 Score = 28.7 bits (61), Expect = 7.8
 Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 159 LFVYNHKGEVLISRVYR-DDIGRNAVDAF 242
           +FV + KG+VLISR YR D+I    +D F
Sbjct: 6   IFVLDVKGKVLISRNYRGDNIDMAVIDKF 34


>AE014297-967|AAF54399.1|  426|Drosophila melanogaster CG9388-PA
           protein.
          Length = 426

 Score = 88.2 bits (209), Expect = 9e-18
 Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
 Frame = +2

Query: 278 SPVTNIARTSFFHIKRANIWLAAVT--KQNVNAAMVFEFLLKIXDVMQSYFGKISEEXXX 451
           +P+   A T+F +IK  N+++ + T   +NVN A+VF FL KI  V   YF ++ EE   
Sbjct: 48  TPILQTAETTFAYIKTNNLYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIR 107

Query: 452 NNFVLIYELLDEILDFGYPRILILGAXRHSSLQQGHQVXL-PR 577
           +NFV+IYELLDE+LDFGYP+       +    Q+GH++ L PR
Sbjct: 108 DNFVIIYELLDELLDFGYPQTTDSKILQEYITQEGHKLELQPR 150



 Score = 28.7 bits (61), Expect = 7.8
 Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 159 LFVYNHKGEVLISRVYR-DDIGRNAVDAF 242
           +FV + KG+VLISR YR D+I    +D F
Sbjct: 6   IFVLDVKGKVLISRNYRGDNIDMAVIDKF 34


>AY069388-1|AAL39533.1|  415|Drosophila melanogaster LD09732p
           protein.
          Length = 415

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 29/64 (45%), Positives = 40/64 (62%)
 Frame = +2

Query: 317 IKRANIWLAAVTKQNVNAAMVFEFLLKIXDVMQSYFGKISEEXXXNNFVLIYELLDEILD 496
           ++R  + L A  KQ V    V EFL ++ D  Q YFG  SE    +N+V++YELLDE+LD
Sbjct: 57  VQRDTVSLVAACKQEVPPLFVIEFLHRVVDTFQDYFGDCSESVIKDNYVVVYELLDEMLD 116

Query: 497 FGYP 508
            G+P
Sbjct: 117 NGFP 120


>AJ009657-1|CAA08768.1|  415|Drosophila melanogaster Mu3 subunit of
           clathrin-associatedprotein complex AP-3 protein.
          Length = 415

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 29/64 (45%), Positives = 40/64 (62%)
 Frame = +2

Query: 317 IKRANIWLAAVTKQNVNAAMVFEFLLKIXDVMQSYFGKISEEXXXNNFVLIYELLDEILD 496
           ++R  + L A  KQ V    V EFL ++ D  Q YFG  SE    +N+V++YELLDE+LD
Sbjct: 57  VQRDTVSLVAACKQEVPPLFVIEFLHRVVDTFQDYFGDCSESVIKDNYVVVYELLDEMLD 116

Query: 497 FGYP 508
            G+P
Sbjct: 117 NGFP 120


>AF110233-1|AAF14249.1|  415|Drosophila melanogaster
           clathrin-associated adaptor complexAP-3 medium chain
           protein.
          Length = 415

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 29/64 (45%), Positives = 40/64 (62%)
 Frame = +2

Query: 317 IKRANIWLAAVTKQNVNAAMVFEFLLKIXDVMQSYFGKISEEXXXNNFVLIYELLDEILD 496
           ++R  + L A  KQ V    V EFL ++ D  Q YFG  SE    +N+V++YELLDE+LD
Sbjct: 57  VQRDTVSLVAACKQEVPPLFVIEFLHRVVDTFQDYFGDCSESVIKDNYVVVYELLDEMLD 116

Query: 497 FGYP 508
            G+P
Sbjct: 117 NGFP 120


>AE014298-989|AAF46231.1|  415|Drosophila melanogaster CG3035-PA
           protein.
          Length = 415

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 29/64 (45%), Positives = 40/64 (62%)
 Frame = +2

Query: 317 IKRANIWLAAVTKQNVNAAMVFEFLLKIXDVMQSYFGKISEEXXXNNFVLIYELLDEILD 496
           ++R  + L A  KQ V    V EFL ++ D  Q YFG  SE    +N+V++YELLDE+LD
Sbjct: 57  VQRDTVSLVAACKQEVPPLFVIEFLHRVVDTFQDYFGDCSESVIKDNYVVVYELLDEMLD 116

Query: 497 FGYP 508
            G+P
Sbjct: 117 NGFP 120


>AY061172-1|AAL28720.1|  157|Drosophila melanogaster LD14109p
           protein.
          Length = 157

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +2

Query: 326 ANIWLAAVTKQNVNAAMVFEFLLKIXDVMQSYFGKISEEXXXNNFVLIYELLDEIL 493
           A+++     +QN N  +  E + +  +++  YFG + E     NF   Y +LDE+L
Sbjct: 63  ASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELL 118


>AF228054-1|AAG43051.1|  164|Drosophila melanogaster
           clathrin-associated adaptor complexAP-1 small chain
           sigma1 protein.
          Length = 164

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +2

Query: 326 ANIWLAAVTKQNVNAAMVFEFLLKIXDVMQSYFGKISEEXXXNNFVLIYELLDEIL 493
           A+++     +QN N  +  E + +  +++  YFG + E     NF   Y +LDE+L
Sbjct: 63  ASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELL 118


>AE014297-3422|AAF56212.2|  157|Drosophila melanogaster CG5864-PA
           protein.
          Length = 157

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +2

Query: 326 ANIWLAAVTKQNVNAAMVFEFLLKIXDVMQSYFGKISEEXXXNNFVLIYELLDEIL 493
           A+++     +QN N  +  E + +  +++  YFG + E     NF   Y +LDE+L
Sbjct: 63  ASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELL 118


>BT025121-1|ABE73292.1|  292|Drosophila melanogaster IP09335p
           protein.
          Length = 292

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -1

Query: 154 PIIVGEASHSFKIGFNVIAIQRLHPFRNST 65
           P+IV E  HSF  G    ++  LH FRN+T
Sbjct: 125 PVIVCEFDHSFFGGSRPSSVVTLHTFRNAT 154


>AE014298-1479|AAF46613.1|  292|Drosophila melanogaster CG12637-PA
           protein.
          Length = 292

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -1

Query: 154 PIIVGEASHSFKIGFNVIAIQRLHPFRNST 65
           P+IV E  HSF  G    ++  LH FRN+T
Sbjct: 125 PVIVCEFDHSFFGGSRPSSVVTLHTFRNAT 154


>AF521597-1|AAN62853.1|  256|Drosophila melanogaster MSP-300
           protein.
          Length = 256

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = -1

Query: 250 FTLNASTALRPISSR*TLEINTSPLWL*TNKPPIIVG 140
           F  NA+TAL+ ++S+    +N +P  L   +PP+++G
Sbjct: 65  FLSNANTALQFLASKRIKLVNINPADLVDGRPPVVLG 101


>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
           isoform B protein.
          Length = 7744

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = -1

Query: 250 FTLNASTALRPISSR*TLEINTSPLWL*TNKPPIIVG 140
           F  NA+TAL+ ++S+    +N +P  L   +PP+++G
Sbjct: 65  FLSNANTALQFLASKRIKLVNINPADLVDGRPPVVLG 101


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
           isoform D protein.
          Length = 11707

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = -1

Query: 250 FTLNASTALRPISSR*TLEINTSPLWL*TNKPPIIVG 140
           F  NA+TAL+ ++S+    +N +P  L   +PP+++G
Sbjct: 65  FLSNANTALQFLASKRIKLVNINPADLVDGRPPVVLG 101


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,724,933
Number of Sequences: 53049
Number of extensions: 603841
Number of successful extensions: 1404
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1404
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)