Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060133.seq
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   6.9  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.9  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.1  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   9.1  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   9.1  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 578 RRLATNPAACRFSCPFSGW 634
           R + +N  A  F C F+GW
Sbjct: 463 RVILSNYDALYFDCGFAGW 481


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 575 MYEDTSFLISSNLGSLYGGSVESFCLLL 492
           ++ D S ++   LG  Y G    +CLL+
Sbjct: 262 LWVDLSHMMQQ-LGKAYSGMYSMYCLLI 288


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 575 MYEDTSFLISSNLGSLYGGSVESFCLLL 492
           ++ D S ++   LG  Y G    +CLL+
Sbjct: 262 LWVDLSHMMQQ-LGKAYSGMYSMYCLLI 288


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 328 QRFHQEHDHRNLS 366
           + FH+EHD R  S
Sbjct: 260 RHFHEEHDTRRAS 272


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -2

Query: 643 LPCPSRKWARKATSSWV 593
           LP   R+W R+  + W+
Sbjct: 32  LPKDPRQWTREHVAQWI 48


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -2

Query: 643 LPCPSRKWARKATSSWV 593
           LP   R+W R+  + W+
Sbjct: 32  LPKDPRQWTREHVAQWI 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,694
Number of Sequences: 336
Number of extensions: 3622
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)