Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060133.seq
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    26   1.2  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          24   3.8  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          24   3.8  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          24   3.8  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           24   5.0  
AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    24   5.0  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   8.7  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   8.7  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   8.7  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 457 ARFHPRCQTAHRRSKQNDSTEPPYS 531
           ARF P   T+HR S  N S+  P S
Sbjct: 344 ARFDPSALTSHRSSSANCSSAAPKS 368


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +2

Query: 389 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQ-LIVGVNKMIPLNHHTVSPDLRKSRRKY 565
           V  G G+ ++ +    Q++   +L     ++  ++   + M  + HHT   +LR +  ++
Sbjct: 44  VMVGMGQKDSYVGDEAQSKR-GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102

Query: 566 PHTSRRLATNPAACR 610
           P        NP A R
Sbjct: 103 PVLLTEAPLNPKANR 117


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +2

Query: 389 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQ-LIVGVNKMIPLNHHTVSPDLRKSRRKY 565
           V  G G+ ++ +    Q++   +L     ++  ++   + M  + HHT   +LR +  ++
Sbjct: 44  VMVGMGQKDSYVGDEAQSKR-GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102

Query: 566 PHTSRRLATNPAACR 610
           P        NP A R
Sbjct: 103 PVLLTEAPLNPKANR 117


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +2

Query: 389 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQ-LIVGVNKMIPLNHHTVSPDLRKSRRKY 565
           V  G G+ ++ +    Q++   +L     ++  ++   + M  + HHT   +LR +  ++
Sbjct: 44  VMVGMGQKDSYVGDEAQSKR-GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102

Query: 566 PHTSRRLATNPAACR 610
           P        NP A R
Sbjct: 103 PVLLTEAPLNPKANR 117


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
 Frame = +2

Query: 389 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQ-LIVGVNKMIPLNHHTVSPDLRKSRRKY 565
           V  G G  +A +    Q++   +L     ++  +I   + M  + HHT   +LR +  ++
Sbjct: 44  VMVGMGNKDAYVGDEAQSKR-GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 102

Query: 566 PHTSRRLATNPAACR 610
           P        NP + R
Sbjct: 103 PVLLTEAPLNPKSNR 117


>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 648 VVXRAHPENGHEKRQAAGLVA 586
           V  +A PENGH K++   + A
Sbjct: 113 VTGKAAPENGHSKKEGEKMEA 133


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 275 WKFETSKYYVTIIDAPG 325
           W +E  K+  T+I+ PG
Sbjct: 487 WNYEDYKFRTTVINMPG 503


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = -3

Query: 477 TPRVKASKACSRV*PFLEIPASNSPVPAATMSTAQSA*EVP 355
           T R  AS   S   P   IPA + PVPA      QS   +P
Sbjct: 354 TSRPVASGPTSHYYPS-HIPAGSQPVPAVVNPHQQSRPTIP 393


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +2

Query: 473 GVKQLIVGVNKMIPLNHHTVSPDLRKSRRK 562
           G++ +++G+ K +    H V  +++  RRK
Sbjct: 138 GLEHIVIGIVKAVASKLHGVDVEIKIIRRK 167


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,768
Number of Sequences: 2352
Number of extensions: 14981
Number of successful extensions: 33
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)