Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060132.seq
(686 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089318-1|AAL90056.1| 522|Drosophila melanogaster AT12538p pro... 122 6e-28
AE014298-884|AAF46159.1| 464|Drosophila melanogaster CG3861-PA,... 122 6e-28
AE014298-883|AAN09169.1| 522|Drosophila melanogaster CG3861-PB,... 122 6e-28
AY058419-1|AAL13648.1| 478|Drosophila melanogaster GH19789p pro... 48 9e-06
AE014297-1450|AAF54748.2| 478|Drosophila melanogaster CG14740-P... 48 9e-06
U30492-1|AAC47078.1| 1231|Drosophila melanogaster Cap protein. 31 2.0
BT029133-1|ABJ17066.1| 1054|Drosophila melanogaster IP16426p pro... 31 2.0
BT023768-1|AAZ41776.1| 1200|Drosophila melanogaster RE14758p pro... 31 2.0
AE014298-2426|AAN09411.1| 1054|Drosophila melanogaster CG9802-PB... 31 2.0
AE014298-2425|AAF48625.2| 1200|Drosophila melanogaster CG9802-PA... 31 2.0
>AY089318-1|AAL90056.1| 522|Drosophila melanogaster AT12538p
protein.
Length = 522
Score = 122 bits (293), Expect = 6e-28
Identities = 71/128 (55%), Positives = 78/128 (60%)
Frame = +1
Query: 256 VGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEVF 435
+GE T+DMMYGGMRGIK LV ETSVLDADEGIRFRGLSIPECQ+ LP A GG EPLPE
Sbjct: 119 MGETTIDMMYGGMRGIKALVTETSVLDADEGIRFRGLSIPECQKVLPAADGGTEPLPEGL 178
Query: 436 SGFSSLAIYPPKRK*SAV*RMGGEAELTGLT*XQC*NNMPGKLHPMSQFLRAAVTATSTV 615
P K + + R E NNMP LHPMSQF AAVTA +
Sbjct: 179 FWLLLTGEVPTKSQVQQLSREWAERAALPQHVVTMLNNMPTTLHPMSQF-AAAVTALNH- 236
Query: 616 NLNFXKXY 639
+ F K Y
Sbjct: 237 DSKFAKAY 244
Score = 48.0 bits (109), Expect = 1e-05
Identities = 23/80 (28%), Positives = 45/80 (56%)
Frame = +2
Query: 17 RSRASCRDLCGSLRSAALKMALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQE 196
R R+ ++ G+L+ + + + QK P +R ++A+ +L+ +L
Sbjct: 40 RMRSKKDNVTGNLKEQQQSATPETLNMPDMQDAQKL-PNVGAYVRMIAADGKSLRDVLAA 98
Query: 197 KIPKEQEKIREFRKKHGSTK 256
K+P+EQE+++ FRK+HG+TK
Sbjct: 99 KVPQEQERVKNFRKQHGATK 118
>AE014298-884|AAF46159.1| 464|Drosophila melanogaster CG3861-PA,
isoform A protein.
Length = 464
Score = 122 bits (293), Expect = 6e-28
Identities = 71/128 (55%), Positives = 78/128 (60%)
Frame = +1
Query: 256 VGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEVF 435
+GE T+DMMYGGMRGIK LV ETSVLDADEGIRFRGLSIPECQ+ LP A GG EPLPE
Sbjct: 61 MGETTIDMMYGGMRGIKALVTETSVLDADEGIRFRGLSIPECQKVLPAADGGTEPLPEGL 120
Query: 436 SGFSSLAIYPPKRK*SAV*RMGGEAELTGLT*XQC*NNMPGKLHPMSQFLRAAVTATSTV 615
P K + + R E NNMP LHPMSQF AAVTA +
Sbjct: 121 FWLLLTGEVPTKSQVQQLSREWAERAALPQHVVTMLNNMPTTLHPMSQF-AAAVTALNH- 178
Query: 616 NLNFXKXY 639
+ F K Y
Sbjct: 179 DSKFAKAY 186
Score = 58.0 bits (134), Expect = 1e-08
Identities = 25/61 (40%), Positives = 44/61 (72%)
Frame = +2
Query: 74 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 253
M+L+RI++ +L E QK P +R ++A+ +L+ +L K+P+EQE+++ FRK+HG+T
Sbjct: 1 MSLYRISARKLSEAQKL-PNVGAYVRMIAADGKSLRDVLAAKVPQEQERVKNFRKQHGAT 59
Query: 254 K 256
K
Sbjct: 60 K 60
>AE014298-883|AAN09169.1| 522|Drosophila melanogaster CG3861-PB,
isoform B protein.
Length = 522
Score = 122 bits (293), Expect = 6e-28
Identities = 71/128 (55%), Positives = 78/128 (60%)
Frame = +1
Query: 256 VGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEVF 435
+GE T+DMMYGGMRGIK LV ETSVLDADEGIRFRGLSIPECQ+ LP A GG EPLPE
Sbjct: 119 MGETTIDMMYGGMRGIKALVTETSVLDADEGIRFRGLSIPECQKVLPAADGGTEPLPEGL 178
Query: 436 SGFSSLAIYPPKRK*SAV*RMGGEAELTGLT*XQC*NNMPGKLHPMSQFLRAAVTATSTV 615
P K + + R E NNMP LHPMSQF AAVTA +
Sbjct: 179 FWLLLTGEVPTKSQVQQLSREWAERAALPQHVVTMLNNMPTTLHPMSQF-AAAVTALNH- 236
Query: 616 NLNFXKXY 639
+ F K Y
Sbjct: 237 DSKFAKAY 244
Score = 48.0 bits (109), Expect = 1e-05
Identities = 23/80 (28%), Positives = 45/80 (56%)
Frame = +2
Query: 17 RSRASCRDLCGSLRSAALKMALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQE 196
R R+ ++ G+L+ + + + QK P +R ++A+ +L+ +L
Sbjct: 40 RMRSKKDNVTGNLKEQQQSATPETLNMPDMQDAQKL-PNVGAYVRMIAADGKSLRDVLAA 98
Query: 197 KIPKEQEKIREFRKKHGSTK 256
K+P+EQE+++ FRK+HG+TK
Sbjct: 99 KVPQEQERVKNFRKQHGATK 118
>AY058419-1|AAL13648.1| 478|Drosophila melanogaster GH19789p
protein.
Length = 478
Score = 48.4 bits (110), Expect = 9e-06
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Frame = +1
Query: 256 VGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKA-KGGEEPLPEV 432
+G+++V+ + GGMRG+ L ETS LD ++GI +RG + + +LP+ +G +E PE
Sbjct: 60 IGQISVNSVIGGMRGLPLLFCETSSLDKNKGIYYRGKLLKDVCAKLPRVQEGTQEGTPEG 119
Query: 433 FSGFSSLAIYPPKRK*SAV*RMGGEAELTGLT*XQC*NNMPGKLHPMSQFLRAA 594
+ P K++ V + + ++M ++HPM+Q A+
Sbjct: 120 CFFLLTSGSMPTKKEAQEVTNEWLKRGSVPRYCLRMIDSMDKRVHPMAQLCAAS 173
>AE014297-1450|AAF54748.2| 478|Drosophila melanogaster CG14740-PA
protein.
Length = 478
Score = 48.4 bits (110), Expect = 9e-06
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Frame = +1
Query: 256 VGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKA-KGGEEPLPEV 432
+G+++V+ + GGMRG+ L ETS LD ++GI +RG + + +LP+ +G +E PE
Sbjct: 60 IGQISVNSVIGGMRGLPLLFCETSSLDKNKGIYYRGKLLKDVCAKLPRVQEGTQEGTPEG 119
Query: 433 FSGFSSLAIYPPKRK*SAV*RMGGEAELTGLT*XQC*NNMPGKLHPMSQFLRAA 594
+ P K++ V + + ++M ++HPM+Q A+
Sbjct: 120 CFFLLTSGSMPTKKEAQEVTNEWLKRGSVPRYCLRMIDSMDKRVHPMAQLCAAS 173
>U30492-1|AAC47078.1| 1231|Drosophila melanogaster Cap protein.
Length = 1231
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 191 QEKIPKEQEKIREFRKKHGSTKSERSQLI 277
QEKI Q+ ++E +KK STK ERS L+
Sbjct: 295 QEKIKDVQKNLKEAKKKVQSTKEERSVLM 323
>BT029133-1|ABJ17066.1| 1054|Drosophila melanogaster IP16426p
protein.
Length = 1054
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 191 QEKIPKEQEKIREFRKKHGSTKSERSQLI 277
QEKI Q+ ++E +KK STK ERS L+
Sbjct: 118 QEKIKDVQKNLKEAKKKVQSTKEERSVLM 146
>BT023768-1|AAZ41776.1| 1200|Drosophila melanogaster RE14758p
protein.
Length = 1200
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 191 QEKIPKEQEKIREFRKKHGSTKSERSQLI 277
QEKI Q+ ++E +KK STK ERS L+
Sbjct: 264 QEKIKDVQKNLKEAKKKVQSTKEERSVLM 292
>AE014298-2426|AAN09411.1| 1054|Drosophila melanogaster CG9802-PB,
isoform B protein.
Length = 1054
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 191 QEKIPKEQEKIREFRKKHGSTKSERSQLI 277
QEKI Q+ ++E +KK STK ERS L+
Sbjct: 118 QEKIKDVQKNLKEAKKKVQSTKEERSVLM 146
>AE014298-2425|AAF48625.2| 1200|Drosophila melanogaster CG9802-PA,
isoform A protein.
Length = 1200
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 191 QEKIPKEQEKIREFRKKHGSTKSERSQLI 277
QEKI Q+ ++E +KK STK ERS L+
Sbjct: 264 QEKIKDVQKNLKEAKKKVQSTKEERSVLM 292
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,362,810
Number of Sequences: 53049
Number of extensions: 628272
Number of successful extensions: 1806
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1799
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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