Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060131.seq
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    30   0.081
Z22925-1|CAA80505.1|  211|Anopheles gambiae ANG12 precursor prot...    24   4.0  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   9.2  

>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 29.9 bits (64), Expect = 0.081
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 168 RSTNELLLCAPTIIFVFGKQYKILSTYIRH 257
           R T E+     T++F+F    K++S Y+RH
Sbjct: 560 RFTQEIFSALITLLFIFETSIKLVSVYVRH 589


>Z22925-1|CAA80505.1|  211|Anopheles gambiae ANG12 precursor
           protein.
          Length = 211

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 326 IVFFIIICVITSSKASCEPAPVGIT 400
           I  F++ C++ +S  SC P    +T
Sbjct: 3   IAAFVVACLVATSAVSCAPTTRPLT 27


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -2

Query: 498 GNASLNSRFYSITAAPSFKPKRSTFSRQKIDRAVIPT 388
           GN  + ++   I AAP  + K   +  +  D+ +I T
Sbjct: 679 GNVKIETKKIDIKAAPRIEAKNDAYIPKGGDKKIIST 715


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,425
Number of Sequences: 2352
Number of extensions: 15063
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)