BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060131.seq
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015533-1|AAH15533.1| 314|Homo sapiens AKAP9 protein protein. 32 2.3
AY803272-1|AAW30454.1| 1492|Homo sapiens AKAP9-BRAF fusion prote... 32 2.3
AJ131693-1|CAB40713.1| 3908|Homo sapiens AKAP450 protein protein. 32 2.3
AJ010770-1|CAA09361.1| 3911|Homo sapiens Hyperion protein protein. 32 2.3
AF026245-1|AAB86384.1| 1642|Homo sapiens yotiao protein. 32 2.3
AC000066-1|AAC60380.1| 1620|Homo sapiens yotiao protein. 32 2.3
AB019691-1|BAA78718.1| 3899|Homo sapiens Centrosome- and Golgi-l... 32 2.3
>BC015533-1|AAH15533.1| 314|Homo sapiens AKAP9 protein protein.
Length = 314
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 160 QQHVMSGKFESTKKNKKKRQVSNRLCEVHKHHDLN 56
Q+ S +KK KKKR+ S+ +V HHDLN
Sbjct: 22 QRKAQSDGQSPSKKQKKKRKTSSSKHDVSAHHDLN 56
>AY803272-1|AAW30454.1| 1492|Homo sapiens AKAP9-BRAF fusion protein
protein.
Length = 1492
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 160 QQHVMSGKFESTKKNKKKRQVSNRLCEVHKHHDLN 56
Q+ S +KK KKKR+ S+ +V HHDLN
Sbjct: 22 QRKAQSDGQSPSKKQKKKRKTSSSKHDVSAHHDLN 56
>AJ131693-1|CAB40713.1| 3908|Homo sapiens AKAP450 protein protein.
Length = 3908
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 160 QQHVMSGKFESTKKNKKKRQVSNRLCEVHKHHDLN 56
Q+ S +KK KKKR+ S+ +V HHDLN
Sbjct: 22 QRKAQSDGQSPSKKQKKKRKTSSSKHDVSAHHDLN 56
>AJ010770-1|CAA09361.1| 3911|Homo sapiens Hyperion protein protein.
Length = 3911
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 160 QQHVMSGKFESTKKNKKKRQVSNRLCEVHKHHDLN 56
Q+ S +KK KKKR+ S+ +V HHDLN
Sbjct: 34 QRKAQSDGQSPSKKQKKKRKTSSSKHDVSAHHDLN 68
>AF026245-1|AAB86384.1| 1642|Homo sapiens yotiao protein.
Length = 1642
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 160 QQHVMSGKFESTKKNKKKRQVSNRLCEVHKHHDLN 56
Q+ S +KK KKKR+ S+ +V HHDLN
Sbjct: 34 QRKAQSDGQSPSKKQKKKRKTSSSKHDVSAHHDLN 68
>AC000066-1|AAC60380.1| 1620|Homo sapiens yotiao protein.
Length = 1620
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 160 QQHVMSGKFESTKKNKKKRQVSNRLCEVHKHHDLN 56
Q+ S +KK KKKR+ S+ +V HHDLN
Sbjct: 3 QRKAQSDGQSPSKKQKKKRKTSSSKHDVSAHHDLN 37
>AB019691-1|BAA78718.1| 3899|Homo sapiens Centrosome- and
Golgi-localized PKN-associated protein (CG-NAP) protein.
Length = 3899
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 160 QQHVMSGKFESTKKNKKKRQVSNRLCEVHKHHDLN 56
Q+ S +KK KKKR+ S+ +V HHDLN
Sbjct: 22 QRKAQSDGQSPSKKQKKKRKTSSSKHDVSAHHDLN 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,003,478
Number of Sequences: 237096
Number of extensions: 1987730
Number of successful extensions: 2838
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2838
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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