Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060130.seq
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.19 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    24   1.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.3  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   7.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   7.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   7.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +2

Query: 242 LVFCGFPFLFSMNFK*TLILNVSVL*ILMLXCLDSFITRFF*LLIN*LRVCI 397
           L+FC     F+M+    L L+   L +L L C+  F + F    I+ L  C+
Sbjct: 180 LLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYCV 231


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 489 YIFCAILLKRDYSDSIL*T*NSF*NTNF 406
           ++ C +LL   Y+D++  T   +  TNF
Sbjct: 5   FVVCCLLLMFSYTDNVSSTRTKYLRTNF 32


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 570 VLISKTRYQVLNVRCLKCYT 511
           VL+ K RY +LN R +K  T
Sbjct: 825 VLMLKNRYIILNGRLIKMET 844


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 540 KLDILFLKSKQRSFFMLTTL 599
           + DIL  KSK   F +L+TL
Sbjct: 109 RFDILLNKSKNLQFPLLSTL 128


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = -3

Query: 622 KFNYWLFYKVVNIKKERCFDFKNKISSFKC 533
           K  Y  F  +     E CF   N + S KC
Sbjct: 143 KIRYSAFGMIFVALLEHCFSMLNYVYSSKC 172


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 540 KLDILFLKSKQRSFFMLTTL 599
           + DIL  KSK   F +L+TL
Sbjct: 109 RFDILLNKSKNLQFPLLSTL 128


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 540 KLDILFLKSKQRSFFMLTTL 599
           + DIL  KSK   F +L+TL
Sbjct: 109 RFDILLNKSKNLQFPLLSTL 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,414
Number of Sequences: 336
Number of extensions: 2963
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)